Protein–RNA interactions for Protein: P35125

USP6, Ubiquitin carboxyl-terminal hydrolase 6, humanhuman

Predictions only

Length 1,406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP6P35125 LINC01215-201ENST00000607746 2592 ntTSL 3 BASIC18.08■□□□□ 0.48
USP6P35125 ACBD5-202ENST00000375897 4173 ntAPPRIS ALT2 TSL 2 BASIC18.08■□□□□ 0.48
USP6P35125 PWP2-201ENST00000291576 3297 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
USP6P35125 ZNF582-201ENST00000301310 2824 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
USP6P35125 CNOT10-201ENST00000328834 2815 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
USP6P35125 AFAP1L2-202ENST00000369271 3964 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
USP6P35125 GBA2-202ENST00000378094 3757 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
USP6P35125 HMOX2-216ENST00000613539 1703 ntTSL 5 BASIC18.07■□□□□ 0.48
USP6P35125 FAM219A-206ENST00000379087 3573 ntAPPRIS ALT1 TSL 4 BASIC18.07■□□□□ 0.48
USP6P35125 RMDN3-201ENST00000260385 3138 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
USP6P35125 COA6-201ENST00000366612 1013 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
USP6P35125 RPL14-203ENST00000416518 812 ntTSL 3 BASIC18.07■□□□□ 0.48
USP6P35125 CTLA4-203ENST00000427473 969 ntTSL 5 BASIC18.07■□□□□ 0.48
USP6P35125 AL161727.1-201ENST00000457409 530 ntBASIC18.07■□□□□ 0.48
USP6P35125 TMCO1-203ENST00000464650 1100 ntTSL 2 BASIC18.07■□□□□ 0.48
USP6P35125 AC108724.1-201ENST00000481669 352 ntBASIC18.07■□□□□ 0.48
USP6P35125 KRT18P63-201ENST00000505463 979 ntBASIC18.07■□□□□ 0.48
USP6P35125 ADORA3-204ENST00000632535 1201 ntTSL 3 BASIC18.07■□□□□ 0.48
USP6P35125 MED6-201ENST00000256379 1995 ntAPPRIS P2 TSL 1 (best) BASIC18.07■□□□□ 0.48
USP6P35125 SPAG1-205ENST00000520508 1796 ntTSL 5 BASIC18.07■□□□□ 0.48
USP6P35125 SULT1A2-202ENST00000395630 1322 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
USP6P35125 KRT18P40-201ENST00000599859 1571 ntBASIC18.07■□□□□ 0.48
USP6P35125 FRRS1L-201ENST00000561981 8197 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
USP6P35125 AL928921.2-201ENST00000641325 2442 ntBASIC18.07■□□□□ 0.48
USP6P35125 NPRL3-212ENST00000620134 3203 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
USP6P35125 SLC2A14-205ENST00000535295 1732 ntTSL 2 BASIC18.07■□□□□ 0.48
USP6P35125 ADCY6-202ENST00000357869 5748 ntTSL 2 BASIC18.07■□□□□ 0.48
USP6P35125 AC020914.1-201ENST00000396477 1476 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
USP6P35125 AC087521.1-201ENST00000501541 2045 ntTSL 2 BASIC18.07■□□□□ 0.48
USP6P35125 HDAC2-206ENST00000519108 2000 ntTSL 2 BASIC18.07■□□□□ 0.48
USP6P35125 MPZL1-203ENST00000392121 3421 ntTSL 2 BASIC18.07■□□□□ 0.48
USP6P35125 BIRC2-208ENST00000532672 2617 ntAPPRIS ALT2 TSL 5 BASIC18.07■□□□□ 0.48
USP6P35125 SSFA2-205ENST00000431877 5150 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
USP6P35125 CCL17-201ENST00000219244 615 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
USP6P35125 OR2T33-201ENST00000318021 1066 ntAPPRIS P1 BASIC18.06■□□□□ 0.48
USP6P35125 C11orf21-201ENST00000381153 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
USP6P35125 RNASEH2CP1-201ENST00000454281 502 ntBASIC18.06■□□□□ 0.48
USP6P35125 RN7SL173P-201ENST00000461853 292 ntBASIC18.06■□□□□ 0.48
USP6P35125 RPL3P9-201ENST00000463217 1183 ntBASIC18.06■□□□□ 0.48
USP6P35125 RN7SL47P-201ENST00000488710 299 ntBASIC18.06■□□□□ 0.48
USP6P35125 AC022447.5-201ENST00000504817 392 ntBASIC18.06■□□□□ 0.48
USP6P35125 KHDRBS3-206ENST00000520981 1243 ntTSL 5 BASIC18.06■□□□□ 0.48
USP6P35125 MIR4539-201ENST00000579784 60 ntBASIC18.06■□□□□ 0.48
USP6P35125 AC026304.1-201ENST00000597953 561 ntBASIC18.06■□□□□ 0.48
USP6P35125 AL591926.3-201ENST00000611630 238 ntBASIC18.06■□□□□ 0.48
USP6P35125 ENO2-201ENST00000229277 2423 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
USP6P35125 DYRK1B-202ENST00000348817 2448 ntTSL 5 BASIC18.06■□□□□ 0.48
USP6P35125 GRIK4-208ENST00000638419 3593 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
USP6P35125 NMNAT3-202ENST00000339837 1863 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
USP6P35125 UROC1-201ENST00000290868 3149 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
USP6P35125 DAPK1-202ENST00000408954 5892 ntAPPRIS P1 TSL 2 BASIC18.06■□□□□ 0.48
USP6P35125 MARVELD3-201ENST00000268485 2912 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
USP6P35125 OR2A25-203ENST00000641663 1741 ntAPPRIS P1 BASIC18.06■□□□□ 0.48
USP6P35125 ZDHHC8P1-202ENST00000418264 1403 ntBASIC18.06■□□□□ 0.48
USP6P35125 CEP135-202ENST00000422247 2092 ntTSL 2 BASIC18.06■□□□□ 0.48
USP6P35125 TMCO3-202ENST00000434316 3050 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
USP6P35125 UBC-205ENST00000536769 3745 ntAPPRIS P1 BASIC18.06■□□□□ 0.48
USP6P35125 EPB41L3-201ENST00000341928 4706 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
USP6P35125 SPAG5-AS1-201ENST00000414744 2143 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
USP6P35125 ZNF512B-201ENST00000369888 5919 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
USP6P35125 YTHDC1-202ENST00000355665 3244 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
USP6P35125 KRBA2-202ENST00000396267 2562 ntTSL 2 BASIC18.06■□□□□ 0.48
USP6P35125 FAM160A2-203ENST00000524416 3327 ntTSL 2 BASIC18.06■□□□□ 0.48
USP6P35125 GOLGA2-212ENST00000609374 2973 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
USP6P35125 ADGRG3-201ENST00000333493 2728 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
USP6P35125 AL031577.1-201ENST00000339867 399 ntBASIC18.06■□□□□ 0.48
USP6P35125 FANK1-203ENST00000368693 1294 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
USP6P35125 HIST1H3H-201ENST00000369163 1237 ntAPPRIS P1 BASIC18.06■□□□□ 0.48
USP6P35125 LINC00388-201ENST00000412714 663 ntTSL 5 BASIC18.06■□□□□ 0.48
USP6P35125 PRSS45-201ENST00000442359 687 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
USP6P35125 HINT1-204ENST00000506908 681 ntTSL 2 BASIC18.06■□□□□ 0.48
USP6P35125 AC104117.1-201ENST00000517817 900 ntBASIC18.06■□□□□ 0.48
USP6P35125 AC117834.1-201ENST00000523197 602 ntTSL 4 BASIC18.06■□□□□ 0.48
USP6P35125 AC063924.1-201ENST00000546680 673 ntBASIC18.06■□□□□ 0.48
USP6P35125 URGCP-MRPS24-201ENST00000603700 795 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
USP6P35125 ZNF674-AS1-202ENST00000609887 672 ntTSL 5 BASIC18.06■□□□□ 0.48
USP6P35125 AC009118.3-201ENST00000622896 873 ntBASIC18.06■□□□□ 0.48
USP6P35125 TTC39A-204ENST00000371750 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
USP6P35125 PAPSS2-202ENST00000456849 3856 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
USP6P35125 TELO2-201ENST00000262319 3314 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
USP6P35125 USP47-207ENST00000527733 4525 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
USP6P35125 LINC01230-201ENST00000625222 3017 ntBASIC18.05■□□□□ 0.48
USP6P35125 GPAT3-201ENST00000264409 2625 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
USP6P35125 MAP7D2-204ENST00000452324 2233 ntAPPRIS ALT2 TSL 2 BASIC18.05■□□□□ 0.48
USP6P35125 EPB42-210ENST00000622454 2227 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
USP6P35125 PGAP2-202ENST00000300730 1843 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
USP6P35125 PGAP2-203ENST00000396986 1837 ntTSL 2 BASIC18.05■□□□□ 0.48
USP6P35125 PAQR8-202ENST00000442253 4738 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
USP6P35125 HIF3A-202ENST00000244303 2250 ntTSL 2 BASIC18.05■□□□□ 0.48
USP6P35125 PLXNB3-201ENST00000361971 6146 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
USP6P35125 RALGDS-202ENST00000372050 3634 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
USP6P35125 SLC5A11-211ENST00000569071 1919 ntTSL 5 BASIC18.05■□□□□ 0.48
USP6P35125 PAPLN-202ENST00000340738 5834 ntAPPRIS P2 TSL 5 BASIC18.05■□□□□ 0.48
USP6P35125 MANSC1-202ENST00000535902 5831 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
USP6P35125 RASGEF1A-202ENST00000374459 3264 ntAPPRIS ALT2 TSL 2 BASIC18.05■□□□□ 0.48
USP6P35125 PATL2-201ENST00000434130 1950 ntAPPRIS P3 TSL 5 BASIC18.05■□□□□ 0.48
USP6P35125 DDR1-271ENST00000513240 2882 ntAPPRIS ALT2 TSL 5 BASIC18.05■□□□□ 0.48
USP6P35125 KLHL32-206ENST00000544166 2864 ntTSL 2 BASIC18.05■□□□□ 0.48
USP6P35125 SCAMP2-201ENST00000268099 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
USP6P35125 CDC20-201ENST00000310955 1675 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 59.7 ms