Protein–RNA interactions for Protein: P32297

CHRNA3, Neuronal acetylcholine receptor subunit alpha-3, humanhuman

Predictions only

Length 505 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA3P32297 INO80-202ENST00000401393 5991 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
CHRNA3P32297 CPEB1-213ENST00000617462 2068 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
CHRNA3P32297 MICB-202ENST00000399150 2346 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
CHRNA3P32297 NOTCH1-201ENST00000277541 9371 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
CHRNA3P32297 HPCAL4-201ENST00000372844 4856 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
CHRNA3P32297 DLGAP3-202ENST00000373347 3856 ntAPPRIS P1 TSL 5 BASIC14.59□□□□□ -0.07
CHRNA3P32297 STRIP2-202ENST00000435494 2866 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
CHRNA3P32297 MPZL2-202ENST00000438295 1370 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
CHRNA3P32297 ACP2-212ENST00000533929 1366 ntTSL 2 BASIC14.59□□□□□ -0.07
CHRNA3P32297 MTMR9-201ENST00000221086 7481 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
CHRNA3P32297 AP001999.1-201ENST00000513405 3684 ntTSL 2 BASIC14.59□□□□□ -0.07
CHRNA3P32297 ACTG1P17-202ENST00000560958 1662 ntTSL 2 BASIC14.58□□□□□ -0.07
CHRNA3P32297 OAS3-201ENST00000228928 6719 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
CHRNA3P32297 NTNG1-204ENST00000370067 4628 ntTSL 5 BASIC14.58□□□□□ -0.07
CHRNA3P32297 PRPF40B-209ENST00000548825 3307 ntAPPRIS P2 TSL 5 BASIC14.58□□□□□ -0.07
CHRNA3P32297 ELP2-221ENST00000542824 2288 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
CHRNA3P32297 APBB3-205ENST00000412920 1455 ntAPPRIS ALT1 TSL 1 (best) BASIC14.58□□□□□ -0.08
CHRNA3P32297 SRSF1-205ENST00000582730 3117 ntTSL 2 BASIC14.58□□□□□ -0.08
CHRNA3P32297 RARS2-201ENST00000369536 1818 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
CHRNA3P32297 COMMD4-201ENST00000267935 1067 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
CHRNA3P32297 COMMD4-202ENST00000338995 722 ntTSL 2 BASIC14.58□□□□□ -0.08
CHRNA3P32297 RNA5SP359-201ENST00000364838 113 ntBASIC14.58□□□□□ -0.08
CHRNA3P32297 TCEAL6-201ENST00000372773 983 ntAPPRIS P1 TSL 3 BASIC14.58□□□□□ -0.08
CHRNA3P32297 OGFR-AS1-201ENST00000431361 668 ntTSL 2 BASIC14.58□□□□□ -0.08
CHRNA3P32297 PTPA-217ENST00000434095 870 ntTSL 2 BASIC14.58□□□□□ -0.08
CHRNA3P32297 BMS1P17-203ENST00000444357 552 ntTSL 4 BASIC14.58□□□□□ -0.08
CHRNA3P32297 RN7SL258P-201ENST00000478664 300 ntBASIC14.58□□□□□ -0.08
CHRNA3P32297 AC093904.2-201ENST00000495580 418 ntTSL 3 BASIC14.58□□□□□ -0.08
CHRNA3P32297 RHEB-207ENST00000496004 744 ntTSL 2 BASIC14.58□□□□□ -0.08
CHRNA3P32297 AC008443.1-201ENST00000511331 1000 ntTSL 3 BASIC14.58□□□□□ -0.08
CHRNA3P32297 AC079328.1-201ENST00000560358 952 ntBASIC14.58□□□□□ -0.08
CHRNA3P32297 REC114-202ENST00000560581 833 ntAPPRIS ALT2 TSL 2 BASIC14.58□□□□□ -0.08
CHRNA3P32297 ANKRD11-208ENST00000563291 593 ntTSL 5 BASIC14.58□□□□□ -0.08
CHRNA3P32297 COMMD4-211ENST00000564815 639 ntTSL 3 BASIC14.58□□□□□ -0.08
CHRNA3P32297 AC005498.2-204ENST00000590613 413 ntTSL 3 BASIC14.58□□□□□ -0.08
CHRNA3P32297 AL133499.1-201ENST00000596207 608 ntBASIC14.58□□□□□ -0.08
CHRNA3P32297 AC006064.4-201ENST00000602946 422 ntTSL 2 BASIC14.58□□□□□ -0.08
CHRNA3P32297 AL109837.1-201ENST00000603272 613 ntBASIC14.58□□□□□ -0.08
CHRNA3P32297 BMS1P22-203ENST00000609679 552 ntTSL 4 BASIC14.58□□□□□ -0.08
CHRNA3P32297 CEMIP-202ENST00000356249 7297 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
CHRNA3P32297 CICP1-201ENST00000416803 2410 ntBASIC14.58□□□□□ -0.08
CHRNA3P32297 ACIN1-204ENST00000397341 2738 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
CHRNA3P32297 CAMSAP3-201ENST00000160298 3889 ntAPPRIS P3 TSL 2 BASIC14.58□□□□□ -0.08
CHRNA3P32297 IKBKE-201ENST00000578328 2493 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
CHRNA3P32297 DNAJC14-202ENST00000317287 2774 ntAPPRIS P1 TSL 2 BASIC14.58□□□□□ -0.08
CHRNA3P32297 TRIM4-203ENST00000355947 3383 ntAPPRIS P4 TSL 1 (best) BASIC14.58□□□□□ -0.08
CHRNA3P32297 ELAVL1-201ENST00000407627 6015 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
CHRNA3P32297 PHF21B-201ENST00000313237 3671 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
CHRNA3P32297 DUSP13-208ENST00000478873 1335 ntTSL 5 BASIC14.58□□□□□ -0.08
CHRNA3P32297 PCDHB5-201ENST00000231134 3408 ntAPPRIS P1 BASIC14.58□□□□□ -0.08
CHRNA3P32297 CREBZF-204ENST00000527447 4037 ntAPPRIS P1 BASIC14.58□□□□□ -0.08
CHRNA3P32297 SLIT3-206ENST00000519560 9706 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.08
CHRNA3P32297 WIZ-202ENST00000389282 4067 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
CHRNA3P32297 XBP1-204ENST00000405219 1690 ntTSL 2 BASIC14.58□□□□□ -0.08
CHRNA3P32297 CCNH-201ENST00000256897 1378 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
CHRNA3P32297 NFATC4-226ENST00000556279 2924 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
CHRNA3P32297 MAP2K3-203ENST00000361818 2034 ntTSL 5 BASIC14.58□□□□□ -0.08
CHRNA3P32297 CYFIP2-219ENST00000616178 4210 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
CHRNA3P32297 MATN1-AS1-201ENST00000414532 3925 ntTSL 2 BASIC14.58□□□□□ -0.08
CHRNA3P32297 SMYD4-201ENST00000305513 4384 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
CHRNA3P32297 CPT1C-202ENST00000323446 2783 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
CHRNA3P32297 OARD1-203ENST00000463088 1515 ntAPPRIS P1 TSL 2 BASIC14.57□□□□□ -0.08
CHRNA3P32297 PITX2-211ENST00000613094 3240 ntAPPRIS ALT1 TSL 5 BASIC14.57□□□□□ -0.08
CHRNA3P32297 PASK-204ENST00000405260 4942 ntAPPRIS P3 TSL 5 BASIC14.57□□□□□ -0.08
CHRNA3P32297 MARK4-201ENST00000262891 3573 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
CHRNA3P32297 MYO1G-201ENST00000258787 3267 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
CHRNA3P32297 MKNK1-203ENST00000371945 2618 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
CHRNA3P32297 TNRC18P1-201ENST00000502875 3650 ntBASIC14.57□□□□□ -0.08
CHRNA3P32297 MBP-205ENST00000397860 4844 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
CHRNA3P32297 C2-209ENST00000452323 1999 ntTSL 2 BASIC14.57□□□□□ -0.08
CHRNA3P32297 LINC00513-201ENST00000447430 1616 ntTSL 5 BASIC14.57□□□□□ -0.08
CHRNA3P32297 C6orf52-201ENST00000259983 619 ntAPPRIS P2 TSL 5 BASIC14.57□□□□□ -0.08
CHRNA3P32297 RPP40-201ENST00000319533 1088 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
CHRNA3P32297 RPS16-202ENST00000339471 643 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
CHRNA3P32297 MBP-201ENST00000354542 575 ntTSL 2 BASIC14.57□□□□□ -0.08
CHRNA3P32297 DPCD-202ENST00000370151 858 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
CHRNA3P32297 HSPB7-203ENST00000406363 648 ntAPPRIS ALT1 TSL 1 (best) BASIC14.57□□□□□ -0.08
CHRNA3P32297 LINC01388-201ENST00000416242 416 ntTSL 3 BASIC14.57□□□□□ -0.08
CHRNA3P32297 AC131097.3-203ENST00000420272 1193 ntTSL 5 BASIC14.57□□□□□ -0.08
CHRNA3P32297 AC026320.2-201ENST00000434379 478 ntBASIC14.57□□□□□ -0.08
CHRNA3P32297 LINC00686-201ENST00000435412 332 ntTSL 3 BASIC14.57□□□□□ -0.08
CHRNA3P32297 AC114488.1-201ENST00000435872 591 ntTSL 3 BASIC14.57□□□□□ -0.08
CHRNA3P32297 AC234782.1-201ENST00000451950 919 ntBASIC14.57□□□□□ -0.08
CHRNA3P32297 RN7SL530P-201ENST00000485097 298 ntBASIC14.57□□□□□ -0.08
CHRNA3P32297 AC008723.1-201ENST00000506922 207 ntBASIC14.57□□□□□ -0.08
CHRNA3P32297 UBE3B-206ENST00000536398 1120 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
CHRNA3P32297 AC016044.1-201ENST00000560818 572 ntTSL 4 BASIC14.57□□□□□ -0.08
CHRNA3P32297 STUB1-204ENST00000564370 875 ntTSL 2 BASIC14.57□□□□□ -0.08
CHRNA3P32297 AC026803.1-201ENST00000569130 274 ntBASIC14.57□□□□□ -0.08
CHRNA3P32297 AC011498.6-201ENST00000592034 510 ntTSL 5 BASIC14.57□□□□□ -0.08
CHRNA3P32297 HPN-206ENST00000597419 1212 ntTSL 5 BASIC14.57□□□□□ -0.08
CHRNA3P32297 HCG18-245ENST00000602550 559 ntTSL 4 BASIC14.57□□□□□ -0.08
CHRNA3P32297 ATRAID-207ENST00000606999 956 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
CHRNA3P32297 LINC01783-202ENST00000614408 828 ntBASIC14.57□□□□□ -0.08
CHRNA3P32297 BX284668.2-205ENST00000619677 828 ntBASIC14.57□□□□□ -0.08
CHRNA3P32297 CDK7-214ENST00000626796 358 ntTSL 5 BASIC14.57□□□□□ -0.08
CHRNA3P32297 CDK7-215ENST00000629350 1149 ntTSL 5 BASIC14.57□□□□□ -0.08
CHRNA3P32297 AC006453.1-201ENST00000636037 1257 ntBASIC14.57□□□□□ -0.08
CHRNA3P32297 TRIO-202ENST00000344204 11100 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
CHRNA3P32297 DCST2-202ENST00000368424 2392 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 66.6 ms