Protein–RNA interactions for Protein: P51587

BRCA2, Breast cancer type 2 susceptibility protein, humanhuman

Predictions only

Length 3,418 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA2P51587 LINC00677-201ENST00000558224 486 ntTSL 3 BASIC14.76□□□□□ -0.05
BRCA2P51587 AC106782.3-201ENST00000563429 258 ntBASIC14.76□□□□□ -0.05
BRCA2P51587 TTC28-AS1_1.1-201ENST00000614690 162 ntBASIC14.76□□□□□ -0.05
BRCA2P51587 RIOK1-202ENST00000379834 2810 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
BRCA2P51587 GTF2H1-203ENST00000453096 2707 ntAPPRIS P1 TSL 2 BASIC14.76□□□□□ -0.05
BRCA2P51587 DAXX-201ENST00000266000 2606 ntAPPRIS P2 TSL 1 (best) BASIC14.76□□□□□ -0.05
BRCA2P51587 MCM4-201ENST00000262105 4183 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
BRCA2P51587 MMP25-201ENST00000336577 3554 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
BRCA2P51587 RAB2A-201ENST00000262646 3848 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
BRCA2P51587 AC004706.4-201ENST00000634965 3537 ntAPPRIS P1 BASIC14.76□□□□□ -0.05
BRCA2P51587 TGM6-201ENST00000202625 2292 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
BRCA2P51587 CEP78-203ENST00000376598 2404 ntAPPRIS ALT2 TSL 5 BASIC14.76□□□□□ -0.05
BRCA2P51587 PRL-203ENST00000617911 1364 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
BRCA2P51587 VIPR2-201ENST00000262178 3944 ntAPPRIS P2 TSL 1 (best) BASIC14.76□□□□□ -0.05
BRCA2P51587 LINC00484-201ENST00000414768 561 ntTSL 5 BASIC14.76□□□□□ -0.05
BRCA2P51587 ATP2A2-211ENST00000552636 529 ntTSL 4 BASIC14.76□□□□□ -0.05
BRCA2P51587 AC068675.1-201ENST00000588996 561 ntTSL 4 BASIC14.76□□□□□ -0.05
BRCA2P51587 AC007998.2-201ENST00000589258 455 ntAPPRIS P1 TSL 3 BASIC14.76□□□□□ -0.05
BRCA2P51587 UBA3-212ENST00000630585 390 ntTSL 4 BASIC14.76□□□□□ -0.05
BRCA2P51587 VWA8-201ENST00000281496 3475 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
BRCA2P51587 KCNQ4-201ENST00000347132 4099 ntAPPRIS P2 TSL 1 (best) BASIC14.76□□□□□ -0.05
BRCA2P51587 RHOU-201ENST00000366691 4372 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
BRCA2P51587 TFDP1-201ENST00000375370 2648 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
BRCA2P51587 ASIC1-201ENST00000228468 4072 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
BRCA2P51587 FKBP4P7-201ENST00000433874 1363 ntBASIC14.75□□□□□ -0.05
BRCA2P51587 AP000897.1-201ENST00000584036 1613 ntBASIC14.75□□□□□ -0.05
BRCA2P51587 ABCF3-201ENST00000292808 2453 ntAPPRIS ALT1 TSL 2 BASIC14.75□□□□□ -0.05
BRCA2P51587 PPP6R2-203ENST00000395741 3304 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
BRCA2P51587 SYCP3-203ENST00000392927 1120 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
BRCA2P51587 AC006372.1-201ENST00000449903 546 ntTSL 2 BASIC14.75□□□□□ -0.05
BRCA2P51587 AC022217.2-201ENST00000518941 472 ntTSL 2 BASIC14.75□□□□□ -0.05
BRCA2P51587 SEC11A-203ENST00000558134 971 ntTSL 3 BASIC14.75□□□□□ -0.05
BRCA2P51587 AC097634.2-201ENST00000615819 604 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
BRCA2P51587 NRG2-209ENST00000541337 3723 ntTSL 5 BASIC14.75□□□□□ -0.05
BRCA2P51587 TRAF3IP1-202ENST00000391993 4003 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
BRCA2P51587 CDC20-201ENST00000310955 1675 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
BRCA2P51587 CEP131-208ENST00000575907 3444 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
BRCA2P51587 GCOM1-214ENST00000587652 2329 ntAPPRIS ALT2 TSL 2 BASIC14.75□□□□□ -0.05
BRCA2P51587 APCDD1L-AS1-203ENST00000427140 2092 ntTSL 2 BASIC14.75□□□□□ -0.05
BRCA2P51587 TCAIM-201ENST00000342649 3687 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
BRCA2P51587 ZNF821-214ENST00000565601 1858 ntAPPRIS P1 TSL 2 BASIC14.75□□□□□ -0.05
BRCA2P51587 POU6F1-208ENST00000550824 2664 ntTSL 5 BASIC14.75□□□□□ -0.05
BRCA2P51587 CARMIL2-201ENST00000334583 4687 ntAPPRIS P3 TSL 1 (best) BASIC14.75□□□□□ -0.05
BRCA2P51587 FBXL19-202ENST00000380310 3796 ntAPPRIS P2 TSL 2 BASIC14.75□□□□□ -0.05
BRCA2P51587 JAML-202ENST00000356289 1944 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
BRCA2P51587 PCDHB6-201ENST00000231136 3266 ntAPPRIS P1 BASIC14.75□□□□□ -0.05
BRCA2P51587 AC106799.1-201ENST00000503188 1676 ntTSL 2 BASIC14.75□□□□□ -0.05
BRCA2P51587 SWI5-204ENST00000419867 1048 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
BRCA2P51587 PIN1P1-202ENST00000439639 301 ntBASIC14.75□□□□□ -0.05
BRCA2P51587 AL354707.1-204ENST00000451142 846 ntTSL 2 BASIC14.75□□□□□ -0.05
BRCA2P51587 RN7SL16P-201ENST00000476316 269 ntBASIC14.75□□□□□ -0.05
BRCA2P51587 RPL30P11-202ENST00000509114 358 ntTSL 3 BASIC14.75□□□□□ -0.05
BRCA2P51587 CLDND1-223ENST00000511081 642 ntTSL 2 BASIC14.75□□□□□ -0.05
BRCA2P51587 IGHV1OR16-3-201ENST00000568138 205 ntBASIC14.75□□□□□ -0.05
BRCA2P51587 AC020763.2-201ENST00000623155 1255 ntBASIC14.75□□□□□ -0.05
BRCA2P51587 AL353801.2-201ENST00000436877 1444 ntTSL 5 BASIC14.75□□□□□ -0.05
BRCA2P51587 DYDC2-204ENST00000372199 2254 ntAPPRIS P3 TSL 1 (best) BASIC14.75□□□□□ -0.05
BRCA2P51587 SC5D-202ENST00000392789 2258 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
BRCA2P51587 NPTN-201ENST00000345330 2444 ntAPPRIS P3 TSL 1 (best) BASIC14.75□□□□□ -0.05
BRCA2P51587 AHCYP7-201ENST00000560847 1308 ntBASIC14.75□□□□□ -0.05
BRCA2P51587 CUL4A-204ENST00000451881 3724 ntTSL 5 BASIC14.75□□□□□ -0.05
BRCA2P51587 KRT36-201ENST00000328119 1644 ntAPPRIS P1 TSL 2 BASIC14.75□□□□□ -0.05
BRCA2P51587 KRT40-202ENST00000398486 1772 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
BRCA2P51587 LDHA-203ENST00000379412 1922 ntAPPRIS P1 TSL 2 BASIC14.75□□□□□ -0.05
BRCA2P51587 GIT2-201ENST00000320063 2094 ntTSL 5 BASIC14.75□□□□□ -0.05
BRCA2P51587 MYOC-201ENST00000037502 2095 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
BRCA2P51587 DDX43-201ENST00000370336 2513 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
BRCA2P51587 CCDC85A-201ENST00000407595 3982 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
BRCA2P51587 JAML-211ENST00000533261 1508 ntTSL 5 BASIC14.75□□□□□ -0.05
BRCA2P51587 XYLB-203ENST00000427323 1666 ntTSL 2 BASIC14.75□□□□□ -0.05
BRCA2P51587 VOPP1-206ENST00000428097 1671 ntTSL 3 BASIC14.75□□□□□ -0.05
BRCA2P51587 PSAP-202ENST00000394936 2872 ntAPPRIS P2 TSL 1 (best) BASIC14.75□□□□□ -0.05
BRCA2P51587 OR2T34-201ENST00000328782 957 ntAPPRIS P1 BASIC14.75□□□□□ -0.05
BRCA2P51587 OR2T3-201ENST00000359594 957 ntAPPRIS P1 BASIC14.75□□□□□ -0.05
BRCA2P51587 FATE1-201ENST00000370350 1072 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
BRCA2P51587 PRDX4-201ENST00000379331 852 ntTSL 2 BASIC14.75□□□□□ -0.05
BRCA2P51587 LTA-213ENST00000418386 1422 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
BRCA2P51587 AC017081.1-201ENST00000420063 823 ntBASIC14.75□□□□□ -0.05
BRCA2P51587 RPL10P12-201ENST00000427342 318 ntBASIC14.75□□□□□ -0.05
BRCA2P51587 ZNF621-204ENST00000431278 2613 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
BRCA2P51587 MTND6P7-201ENST00000433237 524 ntBASIC14.75□□□□□ -0.05
BRCA2P51587 AC007255.1-202ENST00000447171 889 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
BRCA2P51587 FCHSD1-209ENST00000522783 2477 ntTSL 5 BASIC14.75□□□□□ -0.05
BRCA2P51587 MT1G-204ENST00000569500 305 ntTSL 3 BASIC14.75□□□□□ -0.05
BRCA2P51587 AP005264.6-203ENST00000586882 1050 ntTSL 5 BASIC14.75□□□□□ -0.05
BRCA2P51587 AC011456.1-201ENST00000592270 536 ntTSL 4 BASIC14.75□□□□□ -0.05
BRCA2P51587 DNER-201ENST00000341772 3260 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
BRCA2P51587 EPHB4-210ENST00000616502 3737 ntTSL 5 BASIC14.74□□□□□ -0.05
BRCA2P51587 BX255923.2-202ENST00000620833 2874 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
BRCA2P51587 IKZF3-211ENST00000394189 1552 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
BRCA2P51587 CCDC142-202ENST00000393965 3406 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
BRCA2P51587 ZFAND1-201ENST00000220669 1798 ntAPPRIS P3 TSL 1 (best) BASIC14.74□□□□□ -0.05
BRCA2P51587 ZFAND1-221ENST00000523096 1778 ntAPPRIS ALT1 TSL 1 (best) BASIC14.74□□□□□ -0.05
BRCA2P51587 ZNF726-204ENST00000531821 1798 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
BRCA2P51587 RFX1-201ENST00000254325 4332 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
BRCA2P51587 KHDC1L-201ENST00000370388 635 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
BRCA2P51587 ZNF451-205ENST00000370710 375 ntTSL 2 BASIC14.74□□□□□ -0.05
BRCA2P51587 TCTE1-201ENST00000371504 616 ntTSL 3 BASIC14.74□□□□□ -0.05
BRCA2P51587 CST11-202ENST00000377009 554 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
BRCA2P51587 CCDC103-203ENST00000410027 571 ntTSL 4 BASIC14.74□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 101.4 ms