Protein–RNA interactions for Protein: P48067

SLC6A9, Sodium- and chloride-dependent glycine transporter 1, humanhuman

Predictions only

Length 706 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A9P48067 FAM230C-201ENST00000623511 1970 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
SLC6A9P48067 AC005865.2-203ENST00000636557 2959 ntTSL 5 BASIC12.32□□□□□ -0.44
SLC6A9P48067 PPHLN1-206ENST00000395580 1693 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
SLC6A9P48067 RNF220-203ENST00000361799 3009 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
SLC6A9P48067 RNF220-204ENST00000372247 3010 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
SLC6A9P48067 CEP78-205ENST00000424347 11198 ntAPPRIS ALT2 TSL 5 BASIC12.32□□□□□ -0.44
SLC6A9P48067 RUFY4-201ENST00000344321 2352 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
SLC6A9P48067 GTF2IRD2B-203ENST00000472837 3560 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
SLC6A9P48067 PLCD4-202ENST00000417849 2738 ntAPPRIS P2 TSL 5 BASIC12.31□□□□□ -0.44
SLC6A9P48067 NFATC2-207ENST00000610033 2740 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
SLC6A9P48067 SIGLEC6-201ENST00000343300 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
SLC6A9P48067 MECP2-217ENST00000628176 1712 ntTSL 3 BASIC12.31□□□□□ -0.44
SLC6A9P48067 TMPO-202ENST00000266732 3615 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
SLC6A9P48067 FAM95B1-212ENST00000592873 4692 ntBASIC12.31□□□□□ -0.44
SLC6A9P48067 CPT1C-202ENST00000323446 2783 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
SLC6A9P48067 PGRMC1-201ENST00000217971 1911 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
SLC6A9P48067 USP20-202ENST00000358355 4371 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
SLC6A9P48067 GPD1-205ENST00000548814 1591 ntTSL 2 BASIC12.31□□□□□ -0.44
SLC6A9P48067 MAN2C1-216ENST00000563622 2961 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
SLC6A9P48067 SOGA1-201ENST00000237536 14371 ntAPPRIS ALT2 TSL 5 BASIC12.31□□□□□ -0.44
SLC6A9P48067 DUT-208ENST00000559540 1441 ntTSL 2 BASIC12.31□□□□□ -0.44
SLC6A9P48067 OS9-206ENST00000435406 2346 ntTSL 2 BASIC12.31□□□□□ -0.44
SLC6A9P48067 TADA3-204ENST00000440161 1617 ntAPPRIS P1 TSL 2 BASIC12.31□□□□□ -0.44
SLC6A9P48067 GCKR-201ENST00000264717 2186 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
SLC6A9P48067 GLB1L-201ENST00000295759 2745 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
SLC6A9P48067 IP6K2-202ENST00000340879 1185 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
SLC6A9P48067 RNA5SP359-201ENST00000364838 113 ntBASIC12.31□□□□□ -0.44
SLC6A9P48067 WDR3-202ENST00000369441 1035 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
SLC6A9P48067 RHOC-206ENST00000369637 888 ntAPPRIS P1 TSL 3 BASIC12.31□□□□□ -0.44
SLC6A9P48067 C9orf24-203ENST00000379126 496 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
SLC6A9P48067 ADARB2-AS1-201ENST00000381301 625 ntTSL 2 BASIC12.31□□□□□ -0.44
SLC6A9P48067 CSH2-203ENST00000392886 920 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
SLC6A9P48067 IP6K2-205ENST00000413298 792 ntTSL 3 BASIC12.31□□□□□ -0.44
SLC6A9P48067 AC244250.1-201ENST00000438185 451 ntTSL 2 BASIC12.31□□□□□ -0.44
SLC6A9P48067 RPS27L-203ENST00000439025 970 ntTSL 2 BASIC12.31□□□□□ -0.44
SLC6A9P48067 AC011742.3-201ENST00000439053 820 ntBASIC12.31□□□□□ -0.44
SLC6A9P48067 SEPT7P2-209ENST00000450436 601 ntTSL 4 BASIC12.31□□□□□ -0.44
SLC6A9P48067 KLK11-204ENST00000453757 1174 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
SLC6A9P48067 CHCHD2P2-201ENST00000503744 321 ntBASIC12.31□□□□□ -0.44
SLC6A9P48067 AC044849.1-201ENST00000519737 1188 ntBASIC12.31□□□□□ -0.44
SLC6A9P48067 CCNC-217ENST00000523985 958 ntTSL 2 BASIC12.31□□□□□ -0.44
SLC6A9P48067 AURKB-202ENST00000534871 1167 ntTSL 2 BASIC12.31□□□□□ -0.44
SLC6A9P48067 C12orf49-204ENST00000548356 923 ntTSL 2 BASIC12.31□□□□□ -0.44
SLC6A9P48067 NME1-NME2-203ENST00000555572 1193 ntAPPRIS ALT2 TSL 2 BASIC12.31□□□□□ -0.44
SLC6A9P48067 CSH2-206ENST00000560142 749 ntTSL 5 BASIC12.31□□□□□ -0.44
SLC6A9P48067 ANP32A-210ENST00000560303 724 ntAPPRIS ALT2 TSL 5 BASIC12.31□□□□□ -0.44
SLC6A9P48067 AC046168.2-201ENST00000560590 875 ntTSL 3 BASIC12.31□□□□□ -0.44
SLC6A9P48067 CDIP1-202ENST00000562334 1205 ntTSL 2 BASIC12.31□□□□□ -0.44
SLC6A9P48067 JPT2-214ENST00000569765 782 ntTSL 2 BASIC12.31□□□□□ -0.44
SLC6A9P48067 LRRC37A6P-204ENST00000575554 573 ntTSL 3 BASIC12.31□□□□□ -0.44
SLC6A9P48067 FAM236A-201ENST00000593662 453 ntAPPRIS ALT2 TSL 2 BASIC12.31□□□□□ -0.44
SLC6A9P48067 AC020914.3-201ENST00000594712 304 ntBASIC12.31□□□□□ -0.44
SLC6A9P48067 FAM236B-201ENST00000596535 465 ntAPPRIS P1 TSL 2 BASIC12.31□□□□□ -0.44
SLC6A9P48067 LINC00658-206ENST00000600157 901 ntTSL 5 BASIC12.31□□□□□ -0.44
SLC6A9P48067 ZCCHC4-206ENST00000612982 938 ntTSL 5 BASIC12.31□□□□□ -0.44
SLC6A9P48067 SS18-201ENST00000269137 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC12.31□□□□□ -0.44
SLC6A9P48067 BRD7P5-201ENST00000299197 1822 ntBASIC12.31□□□□□ -0.44
SLC6A9P48067 HMGA1-203ENST00000374116 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC12.31□□□□□ -0.44
SLC6A9P48067 TMEM164-203ENST00000372072 4975 ntAPPRIS ALT2 TSL 5 BASIC12.31□□□□□ -0.44
SLC6A9P48067 KRT8P21-201ENST00000430398 1491 ntBASIC12.31□□□□□ -0.44
SLC6A9P48067 AC138028.6-201ENST00000616106 1482 ntBASIC12.31□□□□□ -0.44
SLC6A9P48067 SPTB-202ENST00000389720 6321 ntTSL 5 BASIC12.31□□□□□ -0.44
SLC6A9P48067 PDE4C-204ENST00000539010 1699 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
SLC6A9P48067 PRKD1-201ENST00000331968 3726 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
SLC6A9P48067 LRPAP1-202ENST00000500728 7819 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
SLC6A9P48067 TMEM25-201ENST00000313236 2409 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
SLC6A9P48067 GNAI2-203ENST00000422163 2407 ntTSL 2 BASIC12.31□□□□□ -0.44
SLC6A9P48067 TMEM63B-202ENST00000323267 3198 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
SLC6A9P48067 WDR81-205ENST00000437219 3184 ntTSL 2 BASIC12.31□□□□□ -0.44
SLC6A9P48067 COL1A2-213ENST00000620463 4523 ntTSL 5 BASIC12.31□□□□□ -0.44
SLC6A9P48067 CATSPERE-202ENST00000366533 3019 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
SLC6A9P48067 PCMTD2-207ENST00000609372 1321 ntTSL 4 BASIC12.31□□□□□ -0.44
SLC6A9P48067 SERPINH1-205ENST00000525876 2283 ntTSL 2 BASIC12.31□□□□□ -0.44
SLC6A9P48067 LINC00567-201ENST00000569854 3409 ntBASIC12.31□□□□□ -0.44
SLC6A9P48067 PDHB-206ENST00000474765 1503 ntTSL 5 BASIC12.31□□□□□ -0.44
SLC6A9P48067 INTS5-201ENST00000330574 3285 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
SLC6A9P48067 PIK3AP1-201ENST00000339364 4803 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
SLC6A9P48067 SPPL2B-209ENST00000613503 3456 ntAPPRIS P4 TSL 1 (best) BASIC12.31□□□□□ -0.44
SLC6A9P48067 TBCE-207ENST00000543662 2117 ntAPPRIS ALT2 TSL 2 BASIC12.31□□□□□ -0.44
SLC6A9P48067 POTEE-201ENST00000356920 4159 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
SLC6A9P48067 SIRPA-204ENST00000622179 4570 ntAPPRIS ALT1 TSL 5 BASIC12.3□□□□□ -0.44
SLC6A9P48067 AL357673.2-201ENST00000623663 4969 ntTSL 5 BASIC12.3□□□□□ -0.44
SLC6A9P48067 MTUS2-206ENST00000612955 7430 ntAPPRIS ALT2 TSL 5 BASIC12.3□□□□□ -0.44
SLC6A9P48067 FFAR4-201ENST00000371481 3605 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
SLC6A9P48067 HMGCS2-201ENST00000369406 2428 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
SLC6A9P48067 UGGT2-201ENST00000376712 2240 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
SLC6A9P48067 SLC43A3-214ENST00000529554 2207 ntAPPRIS P3 TSL 2 BASIC12.3□□□□□ -0.44
SLC6A9P48067 TRAIP-201ENST00000331456 2028 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
SLC6A9P48067 AL772337.1-201ENST00000399186 2014 ntTSL 5 BASIC12.3□□□□□ -0.44
SLC6A9P48067 LINC002481-201ENST00000499502 1821 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
SLC6A9P48067 GJB1-201ENST00000361726 1637 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
SLC6A9P48067 ELP4-228ENST00000640954 1612 ntTSL 5 BASIC12.3□□□□□ -0.44
SLC6A9P48067 NLRP7-209ENST00000592784 3269 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
SLC6A9P48067 LINC01535-206ENST00000592712 1699 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
SLC6A9P48067 GTF2IRD2-201ENST00000451013 3558 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
SLC6A9P48067 SUPT4H1-201ENST00000225504 1489 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
SLC6A9P48067 GNAI2-207ENST00000451956 1486 ntTSL 2 BASIC12.3□□□□□ -0.44
SLC6A9P48067 SPATA7-217ENST00000556553 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
SLC6A9P48067 MBNL1-AS1-202ENST00000608395 6585 ntTSL 2 BASIC12.3□□□□□ -0.44
SLC6A9P48067 NCR3-202ENST00000376071 541 ntTSL 5 BASIC12.3□□□□□ -0.44
Retrieved 100 of 98,524 protein–RNA pairs in 56.3 ms