Protein–RNA interactions for Protein: P21912

SDHB, Succinate dehydrogenase [ubiquinone] iron-sulfur subunit, mitochondrial, humanhuman

Predictions only

Length 280 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SDHBP21912 PUS7-202ENST00000469408 2356 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
SDHBP21912 IGFBP5-201ENST00000233813 6215 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
SDHBP21912 SRPX-205ENST00000538295 1780 ntAPPRIS ALT2 TSL 2 BASIC13.55□□□□□ -0.24
SDHBP21912 PLCB1-218ENST00000629992 3095 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
SDHBP21912 BAK1-201ENST00000360661 2132 ntTSL 5 BASIC13.55□□□□□ -0.24
SDHBP21912 MAX-219ENST00000618858 2141 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
SDHBP21912 SEMA4B-201ENST00000332496 3781 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
SDHBP21912 DUSP28-202ENST00000405954 3461 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
SDHBP21912 UBXN11-204ENST00000374217 1846 ntAPPRIS ALT2 TSL 2 BASIC13.55□□□□□ -0.24
SDHBP21912 NEAT1-201ENST00000499732 1811 ntTSL 2 BASIC13.55□□□□□ -0.24
SDHBP21912 CAMK2D-207ENST00000505990 1802 ntTSL 5 BASIC13.55□□□□□ -0.24
SDHBP21912 IMMT-212ENST00000620815 1520 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
SDHBP21912 MARS-201ENST00000262027 2905 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
SDHBP21912 STK26-202ENST00000394334 3288 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
SDHBP21912 TLK1-202ENST00000360843 5726 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
SDHBP21912 SLC4A7-207ENST00000437179 3667 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
SDHBP21912 MICAL3-206ENST00000441493 9445 ntAPPRIS P1 TSL 5 BASIC13.55□□□□□ -0.24
SDHBP21912 PPL-201ENST00000345988 6238 ntAPPRIS P2 TSL 1 (best) BASIC13.55□□□□□ -0.24
SDHBP21912 FIG4-201ENST00000230124 3011 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
SDHBP21912 LIMS1-215ENST00000544547 4461 ntAPPRIS ALT1 TSL 1 (best) BASIC13.55□□□□□ -0.24
SDHBP21912 HMOX2-201ENST00000219700 1621 ntAPPRIS P1 TSL 5 BASIC13.55□□□□□ -0.24
SDHBP21912 LINC01750-202ENST00000438293 3068 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
SDHBP21912 HAX1-201ENST00000328703 1227 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
SDHBP21912 GLRX2-202ENST00000367440 1131 ntAPPRIS P4 TSL 1 (best) BASIC13.55□□□□□ -0.24
SDHBP21912 TPM3-211ENST00000368531 1115 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
SDHBP21912 PPM1N-203ENST00000396737 872 ntTSL 2 BASIC13.55□□□□□ -0.24
SDHBP21912 Metazoa_SRP.8-201ENST00000398067 251 ntBASIC13.55□□□□□ -0.24
SDHBP21912 CYCS-203ENST00000409764 799 ntAPPRIS P1 TSL 3 BASIC13.55□□□□□ -0.24
SDHBP21912 AL359182.1-201ENST00000435915 469 ntTSL 3 BASIC13.55□□□□□ -0.24
SDHBP21912 AL355500.1-201ENST00000439421 297 ntTSL 3 BASIC13.55□□□□□ -0.24
SDHBP21912 GS1-124K5.4-201ENST00000445681 540 ntTSL 2 BASIC13.55□□□□□ -0.24
SDHBP21912 AC139887.2-201ENST00000503571 531 ntTSL 4 BASIC13.55□□□□□ -0.24
SDHBP21912 TATDN3-208ENST00000526997 794 ntTSL 3 BASIC13.55□□□□□ -0.24
SDHBP21912 HNRNPA1P72-201ENST00000529511 967 ntBASIC13.55□□□□□ -0.24
SDHBP21912 TATDN3-213ENST00000531963 1291 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
SDHBP21912 BCL2L2-PABPN1-201ENST00000553781 1241 ntAPPRIS P1 TSL 2 BASIC13.55□□□□□ -0.24
SDHBP21912 DLX6-203ENST00000555308 666 ntAPPRIS ALT2 TSL 2 BASIC13.55□□□□□ -0.24
SDHBP21912 MT1X-202ENST00000562939 538 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
SDHBP21912 AC026150.1-201ENST00000562992 701 ntTSL 5 BASIC13.55□□□□□ -0.24
SDHBP21912 AC005586.2-201ENST00000563946 837 ntBASIC13.55□□□□□ -0.24
SDHBP21912 AC026461.1-201ENST00000567563 551 ntTSL 4 BASIC13.55□□□□□ -0.24
SDHBP21912 SMIM22-207ENST00000589721 822 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
SDHBP21912 AC009041.4-201ENST00000620075 638 ntBASIC13.55□□□□□ -0.24
SDHBP21912 AC126755.5-201ENST00000622756 267 ntBASIC13.55□□□□□ -0.24
SDHBP21912 SPRY4-202ENST00000434127 2379 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
SDHBP21912 NPHP4-201ENST00000378156 4994 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
SDHBP21912 HORMAD1-202ENST00000361824 1692 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
SDHBP21912 SMTN-223ENST00000619644 3227 ntTSL 2 BASIC13.55□□□□□ -0.24
SDHBP21912 PCDHA9-202ENST00000532602 6293 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
SDHBP21912 CBFA2T3-202ENST00000327483 4033 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
SDHBP21912 ZFY-201ENST00000155093 5239 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
SDHBP21912 ATP12A-201ENST00000218548 3732 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
SDHBP21912 SPC25-201ENST00000282074 1354 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
SDHBP21912 SFMBT1-201ENST00000394752 4548 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
SDHBP21912 KAT7-210ENST00000509773 1774 ntTSL 2 BASIC13.55□□□□□ -0.24
SDHBP21912 MBD1-209ENST00000398495 2178 ntTSL 5 BASIC13.55□□□□□ -0.24
SDHBP21912 KCNJ18-201ENST00000567955 2196 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
SDHBP21912 CNDP2-201ENST00000324262 5130 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
SDHBP21912 SYBU-207ENST00000433638 3104 ntAPPRIS ALT2 TSL 5 BASIC13.55□□□□□ -0.24
SDHBP21912 AFAP1L1-205ENST00000515000 2319 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
SDHBP21912 ALDH4A1-205ENST00000538309 1940 ntTSL 2 BASIC13.54□□□□□ -0.24
SDHBP21912 ECE1-201ENST00000264205 2381 ntAPPRIS P4 TSL 1 (best) BASIC13.54□□□□□ -0.24
SDHBP21912 THUMPD3-210ENST00000515662 2390 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
SDHBP21912 POLN-210ENST00000511885 3253 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
SDHBP21912 ARPC1A-201ENST00000262942 1565 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
SDHBP21912 AC026790.1-201ENST00000399760 2941 ntTSL 2 BASIC13.54□□□□□ -0.24
SDHBP21912 ITGAV-201ENST00000261023 7030 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
SDHBP21912 CDCA7-202ENST00000347703 2500 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
SDHBP21912 MAST1-201ENST00000251472 4833 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
SDHBP21912 RNASEH2B-202ENST00000422660 4830 ntTSL 5 BASIC13.54□□□□□ -0.24
SDHBP21912 GK-204ENST00000378945 2063 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
SDHBP21912 SEMA3G-201ENST00000231721 4899 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
SDHBP21912 GPX3-201ENST00000388825 1636 ntAPPRIS P2 TSL 1 (best) BASIC13.54□□□□□ -0.24
SDHBP21912 SPRED1-201ENST00000299084 7780 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
SDHBP21912 ABCC1-201ENST00000399408 6594 ntTSL 5 BASIC13.54□□□□□ -0.24
SDHBP21912 ABCC1-202ENST00000399410 6552 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
SDHBP21912 DNMT3B-204ENST00000353855 4237 ntTSL 5 BASIC13.54□□□□□ -0.24
SDHBP21912 AAMP-202ENST00000420660 1761 ntTSL 2 BASIC13.54□□□□□ -0.24
SDHBP21912 WFDC2-203ENST00000342873 818 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
SDHBP21912 SGCA-202ENST00000344627 1057 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
SDHBP21912 U3.5-201ENST00000363448 216 ntBASIC13.54□□□□□ -0.24
SDHBP21912 MRPL55-209ENST00000366735 1212 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
SDHBP21912 CASP8-206ENST00000392258 1060 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
SDHBP21912 THAP4-203ENST00000402545 833 ntTSL 5 BASIC13.54□□□□□ -0.24
SDHBP21912 HNRNPA1P59-201ENST00000430583 918 ntBASIC13.54□□□□□ -0.24
SDHBP21912 RN7SL794P-201ENST00000469816 280 ntBASIC13.54□□□□□ -0.24
SDHBP21912 JPT1-205ENST00000470924 663 ntTSL 5 BASIC13.54□□□□□ -0.24
SDHBP21912 RNF7-205ENST00000480908 782 ntTSL 4 BASIC13.54□□□□□ -0.24
SDHBP21912 AL358215.1-201ENST00000481350 482 ntTSL 5 BASIC13.54□□□□□ -0.24
SDHBP21912 AC112250.1-201ENST00000504640 745 ntBASIC13.54□□□□□ -0.24
SDHBP21912 AC099343.1-201ENST00000513481 609 ntBASIC13.54□□□□□ -0.24
SDHBP21912 OR52V1P-201ENST00000515557 898 ntBASIC13.54□□□□□ -0.24
SDHBP21912 HMOX2-213ENST00000575120 1027 ntTSL 3 BASIC13.54□□□□□ -0.24
SDHBP21912 ZNF235-203ENST00000589248 532 ntTSL 3 BASIC13.54□□□□□ -0.24
SDHBP21912 AC008764.4-207ENST00000600705 956 ntTSL 2 BASIC13.54□□□□□ -0.24
SDHBP21912 OXTR-201ENST00000316793 4364 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
SDHBP21912 PCDHB3-201ENST00000231130 3355 ntAPPRIS P1 BASIC13.54□□□□□ -0.24
SDHBP21912 GLB1L2-205ENST00000535456 3365 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
SDHBP21912 CDK5RAP2-202ENST00000360190 5985 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
SDHBP21912 LYPLA1-202ENST00000343231 1308 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Retrieved 100 of 98,524 protein–RNA pairs in 89.5 ms