Protein–RNA interactions for Protein: F8WFD2

NPIPA3, Nuclear pore complex-interacting protein family member A3, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA3F8WFD2 AC019118.2-201ENST00000425776 718 ntTSL 5 BASIC12.63□□□□□ -0.39
NPIPA3F8WFD2 PPM1N-208ENST00000456399 618 ntTSL 3 BASIC12.63□□□□□ -0.39
NPIPA3F8WFD2 GLYCTK-204ENST00000471180 992 ntTSL 2 BASIC12.63□□□□□ -0.39
NPIPA3F8WFD2 AL157792.1-201ENST00000488281 530 ntBASIC12.63□□□□□ -0.39
NPIPA3F8WFD2 SP6-202ENST00000536300 3848 ntAPPRIS P1 TSL 2 BASIC12.63□□□□□ -0.39
NPIPA3F8WFD2 AC226150.1-201ENST00000544259 466 ntBASIC12.63□□□□□ -0.39
NPIPA3F8WFD2 AC026310.2-201ENST00000546353 728 ntTSL 4 BASIC12.63□□□□□ -0.39
NPIPA3F8WFD2 SNORD3B-1-201ENST00000577988 758 ntBASIC12.63□□□□□ -0.39
NPIPA3F8WFD2 MIR4265-201ENST00000582152 99 ntBASIC12.63□□□□□ -0.39
NPIPA3F8WFD2 STAT5A-208ENST00000587646 1022 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
NPIPA3F8WFD2 AP001269.2-201ENST00000590055 379 ntTSL 3 BASIC12.63□□□□□ -0.39
NPIPA3F8WFD2 RPL13A-213ENST00000621674 1098 ntTSL 5 BASIC12.63□□□□□ -0.39
NPIPA3F8WFD2 AC002044.2-201ENST00000624910 970 ntBASIC12.63□□□□□ -0.39
NPIPA3F8WFD2 RNF216-205ENST00000425013 5639 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
NPIPA3F8WFD2 ACAD8-201ENST00000281182 2249 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
NPIPA3F8WFD2 SLC25A3-216ENST00000551917 1359 ntAPPRIS P4 TSL 2 BASIC12.63□□□□□ -0.39
NPIPA3F8WFD2 KRT8P43-201ENST00000406052 1458 ntBASIC12.63□□□□□ -0.39
NPIPA3F8WFD2 SIMC1-205ENST00000443967 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
NPIPA3F8WFD2 SEPT6-204ENST00000360156 2609 ntAPPRIS ALT1 TSL 1 (best) BASIC12.63□□□□□ -0.39
NPIPA3F8WFD2 SDR42E2-201ENST00000602312 2630 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
NPIPA3F8WFD2 ITGB2-203ENST00000355153 2913 ntAPPRIS P1 TSL 2 BASIC12.63□□□□□ -0.39
NPIPA3F8WFD2 EPHB4-210ENST00000616502 3737 ntTSL 5 BASIC12.63□□□□□ -0.39
NPIPA3F8WFD2 LOXL3-202ENST00000393937 2398 ntTSL 5 BASIC12.63□□□□□ -0.39
NPIPA3F8WFD2 ARHGEF26-203ENST00000465817 2353 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
NPIPA3F8WFD2 IL20RA-201ENST00000316649 3485 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
NPIPA3F8WFD2 KIF6-201ENST00000229913 1330 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
NPIPA3F8WFD2 RERE-202ENST00000377464 6733 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
NPIPA3F8WFD2 CAB39L-204ENST00000409130 1411 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
NPIPA3F8WFD2 DUT-208ENST00000559540 1441 ntTSL 2 BASIC12.62□□□□□ -0.39
NPIPA3F8WFD2 LIPE-AS1-204ENST00000594624 1448 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
NPIPA3F8WFD2 NCF4-202ENST00000397147 1641 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
NPIPA3F8WFD2 ELP4-228ENST00000640954 1612 ntTSL 5 BASIC12.62□□□□□ -0.39
NPIPA3F8WFD2 FAM86C1-201ENST00000346333 2010 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
NPIPA3F8WFD2 SPTBN2-201ENST00000309996 7866 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
NPIPA3F8WFD2 AMACR-203ENST00000382072 2919 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
NPIPA3F8WFD2 HDAC7-209ENST00000427332 3016 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
NPIPA3F8WFD2 SLC40A1-201ENST00000261024 3442 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
NPIPA3F8WFD2 MAP7D2-201ENST00000379643 3918 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
NPIPA3F8WFD2 MYO9A-202ENST00000424560 4008 ntTSL 5 BASIC12.62□□□□□ -0.39
NPIPA3F8WFD2 YIPF6-201ENST00000374622 6134 ntTSL 2 BASIC12.62□□□□□ -0.39
NPIPA3F8WFD2 SOX21-AS1-201ENST00000438290 3287 ntTSL 2 BASIC12.62□□□□□ -0.39
NPIPA3F8WFD2 SLC46A3-201ENST00000266943 3173 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
NPIPA3F8WFD2 MSI1-201ENST00000257552 2975 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
NPIPA3F8WFD2 HDAC11-213ENST00000437379 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
NPIPA3F8WFD2 FLOT2-210ENST00000585169 2585 ntAPPRIS ALT1 TSL 5 BASIC12.62□□□□□ -0.39
NPIPA3F8WFD2 AC005840.4-201ENST00000541242 2494 ntBASIC12.62□□□□□ -0.39
NPIPA3F8WFD2 SERPINE3-204ENST00000524365 2293 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
NPIPA3F8WFD2 CRACR2A-201ENST00000252322 2186 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
NPIPA3F8WFD2 RRAGB-202ENST00000374941 2061 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
NPIPA3F8WFD2 AC068760.1-201ENST00000493579 1953 ntBASIC12.62□□□□□ -0.39
NPIPA3F8WFD2 AC019109.1-201ENST00000401725 1874 ntBASIC12.62□□□□□ -0.39
NPIPA3F8WFD2 TMEM87A-201ENST00000307216 1598 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
NPIPA3F8WFD2 TBC1D27-202ENST00000424239 1573 ntBASIC12.62□□□□□ -0.39
NPIPA3F8WFD2 MSANTD2P1-201ENST00000445341 1368 ntBASIC12.62□□□□□ -0.39
NPIPA3F8WFD2 MAGOH-202ENST00000371470 756 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
NPIPA3F8WFD2 AL390778.2-201ENST00000420883 886 ntTSL 3 BASIC12.62□□□□□ -0.39
NPIPA3F8WFD2 ACYP2-204ENST00000422521 1115 ntTSL 5 BASIC12.62□□□□□ -0.39
NPIPA3F8WFD2 RPL35P9-201ENST00000446059 350 ntBASIC12.62□□□□□ -0.39
NPIPA3F8WFD2 ALG1L6P-201ENST00000515248 758 ntBASIC12.62□□□□□ -0.39
NPIPA3F8WFD2 RN7SKP155-201ENST00000516031 288 ntBASIC12.62□□□□□ -0.39
NPIPA3F8WFD2 C11orf97-201ENST00000542198 701 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
NPIPA3F8WFD2 VENTXP3-201ENST00000546480 773 ntBASIC12.62□□□□□ -0.39
NPIPA3F8WFD2 AC011921.1-201ENST00000559739 557 ntTSL 4 BASIC12.62□□□□□ -0.39
NPIPA3F8WFD2 NPTN-204ENST00000562924 1094 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
NPIPA3F8WFD2 AC115099.1-201ENST00000570413 362 ntTSL 3 BASIC12.62□□□□□ -0.39
NPIPA3F8WFD2 ZSCAN10-205ENST00000572548 618 ntTSL 3 BASIC12.62□□□□□ -0.39
NPIPA3F8WFD2 AC011444.1-201ENST00000587836 639 ntTSL 3 BASIC12.62□□□□□ -0.39
NPIPA3F8WFD2 AC005498.2-204ENST00000590613 413 ntTSL 3 BASIC12.62□□□□□ -0.39
NPIPA3F8WFD2 HPX-213ENST00000615166 826 ntTSL 5 BASIC12.62□□□□□ -0.39
NPIPA3F8WFD2 SRSF3-208ENST00000620941 869 ntAPPRIS P1 TSL 3 BASIC12.62□□□□□ -0.39
NPIPA3F8WFD2 AC127024.7-201ENST00000625101 200 ntBASIC12.62□□□□□ -0.39
NPIPA3F8WFD2 AC104333.4-201ENST00000632866 554 ntTSL 3 BASIC12.62□□□□□ -0.39
NPIPA3F8WFD2 GORASP1-201ENST00000319283 3722 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
NPIPA3F8WFD2 TLR6-202ENST00000436693 5880 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
NPIPA3F8WFD2 NKIRAS2-201ENST00000307641 2948 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
NPIPA3F8WFD2 ARHGAP9-213ENST00000550288 2818 ntTSL 2 BASIC12.62□□□□□ -0.39
NPIPA3F8WFD2 USP19-207ENST00000434032 4677 ntAPPRIS ALT2 TSL 2 BASIC12.62□□□□□ -0.39
NPIPA3F8WFD2 STIP1-203ENST00000358794 2743 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
NPIPA3F8WFD2 AC006450.3-201ENST00000453529 2146 ntTSL 2 BASIC12.62□□□□□ -0.39
NPIPA3F8WFD2 NOP58-201ENST00000264279 2046 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
NPIPA3F8WFD2 RAB6C-201ENST00000410061 3075 ntAPPRIS P1 BASIC12.62□□□□□ -0.39
NPIPA3F8WFD2 AAMP-204ENST00000444053 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC12.62□□□□□ -0.39
NPIPA3F8WFD2 CETP-203ENST00000566128 1733 ntTSL 5 BASIC12.62□□□□□ -0.39
NPIPA3F8WFD2 LINC02021-201ENST00000504808 1608 ntTSL 3 BASIC12.62□□□□□ -0.39
NPIPA3F8WFD2 SLC34A1-201ENST00000324417 2573 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
NPIPA3F8WFD2 PHB-210ENST00000511832 1509 ntTSL 2 BASIC12.62□□□□□ -0.39
NPIPA3F8WFD2 BCL2L12-211ENST00000614495 1402 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
NPIPA3F8WFD2 TAB1-201ENST00000216160 3237 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
NPIPA3F8WFD2 RHOG-201ENST00000351018 1319 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
NPIPA3F8WFD2 PDXDC2P-206ENST00000534700 1315 ntBASIC12.62□□□□□ -0.39
NPIPA3F8WFD2 RAB6B-201ENST00000285208 5526 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
NPIPA3F8WFD2 KRT75-201ENST00000252245 2324 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
NPIPA3F8WFD2 SCAMP5-202ENST00000425597 3411 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
NPIPA3F8WFD2 SLC25A35-201ENST00000380067 2785 ntTSL 2 BASIC12.61□□□□□ -0.39
NPIPA3F8WFD2 AC004554.1-201ENST00000422830 1468 ntBASIC12.61□□□□□ -0.39
NPIPA3F8WFD2 PGRMC1-201ENST00000217971 1911 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
NPIPA3F8WFD2 PSEN2-201ENST00000366782 2465 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
NPIPA3F8WFD2 SNED1-205ENST00000405547 7986 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
NPIPA3F8WFD2 POLM-203ENST00000395831 2380 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
NPIPA3F8WFD2 AC027288.3-202ENST00000550268 1820 ntTSL 2 BASIC12.61□□□□□ -0.39
Retrieved 100 of 98,524 protein–RNA pairs in 80.4 ms