Protein–RNA interactions for Protein: Q8TCU4

ALMS1, Alstrom syndrome protein 1, humanhuman

Predictions only

Length 4,167 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALMS1Q8TCU4 AP002414.5-201ENST00000591853 258 ntTSL 4 BASIC8.86□□□□□ -0.99
ALMS1Q8TCU4 ZNF256-201ENST00000282308 2172 ntAPPRIS P1 TSL 1 (best) BASIC8.86□□□□□ -0.99
ALMS1Q8TCU4 C17orf80-202ENST00000268942 3449 ntAPPRIS ALT2 TSL 1 (best) BASIC8.86□□□□□ -0.99
ALMS1Q8TCU4 PDXDC1-218ENST00000627450 2683 ntTSL 2 BASIC8.86□□□□□ -0.99
ALMS1Q8TCU4 TMPRSS4-213ENST00000522824 2052 ntAPPRIS ALT2 TSL 1 (best) BASIC8.86□□□□□ -0.99
ALMS1Q8TCU4 FAM163A-201ENST00000341785 2909 ntAPPRIS P1 TSL 1 (best) BASIC8.86□□□□□ -0.99
ALMS1Q8TCU4 USP28-214ENST00000545540 3431 ntTSL 2 BASIC8.85□□□□□ -0.99
ALMS1Q8TCU4 ACSS1-201ENST00000323482 3680 ntAPPRIS P1 TSL 1 (best) BASIC8.85□□□□□ -0.99
ALMS1Q8TCU4 UBE2I-201ENST00000325437 2832 ntAPPRIS P1 TSL 3 BASIC8.85□□□□□ -0.99
ALMS1Q8TCU4 TEAD3-201ENST00000338863 2983 ntAPPRIS ALT2 TSL 1 (best) BASIC8.85□□□□□ -0.99
ALMS1Q8TCU4 TRAF3IP1-201ENST00000373327 4279 ntAPPRIS P3 TSL 1 (best) BASIC8.85□□□□□ -0.99
ALMS1Q8TCU4 GPN1-211ENST00000610189 1778 ntAPPRIS ALT2 TSL 1 (best) BASIC8.85□□□□□ -0.99
ALMS1Q8TCU4 GLB1L-202ENST00000392089 2574 ntAPPRIS P1 TSL 1 (best) BASIC8.85□□□□□ -0.99
ALMS1Q8TCU4 HFE-202ENST00000317896 1922 ntTSL 1 (best) BASIC8.85□□□□□ -0.99
ALMS1Q8TCU4 ADORA1-201ENST00000309502 2896 ntAPPRIS P1 TSL 1 (best) BASIC8.85□□□□□ -0.99
ALMS1Q8TCU4 RN7SKP245-201ENST00000364025 320 ntBASIC8.85□□□□□ -0.99
ALMS1Q8TCU4 METTL5-203ENST00000392640 800 ntAPPRIS P2 TSL 1 (best) BASIC8.85□□□□□ -0.99
ALMS1Q8TCU4 KRT41P-201ENST00000393988 1293 ntBASIC8.85□□□□□ -0.99
ALMS1Q8TCU4 OR2T32P-201ENST00000403423 963 ntBASIC8.85□□□□□ -0.99
ALMS1Q8TCU4 AC253536.2-201ENST00000423307 254 ntBASIC8.85□□□□□ -0.99
ALMS1Q8TCU4 LINC00271-202ENST00000436554 655 ntTSL 5 BASIC8.85□□□□□ -0.99
ALMS1Q8TCU4 MTND6P9-201ENST00000458075 519 ntBASIC8.85□□□□□ -0.99
ALMS1Q8TCU4 PTDSS1-206ENST00000522072 1112 ntTSL 2 BASIC8.85□□□□□ -0.99
ALMS1Q8TCU4 AC011773.4-202ENST00000566000 1264 ntBASIC8.85□□□□□ -0.99
ALMS1Q8TCU4 AL137028.1-201ENST00000620521 555 ntBASIC8.85□□□□□ -0.99
ALMS1Q8TCU4 LINC00643-207ENST00000637212 734 ntBASIC8.85□□□□□ -0.99
ALMS1Q8TCU4 COPS7A-201ENST00000229251 1721 ntAPPRIS P1 TSL 1 (best) BASIC8.85□□□□□ -0.99
ALMS1Q8TCU4 IL9R-202ENST00000369423 2032 ntAPPRIS ALT2 TSL 1 (best) BASIC8.85□□□□□ -0.99
ALMS1Q8TCU4 THEMIS2-201ENST00000328928 2337 ntTSL 2 BASIC8.85□□□□□ -0.99
ALMS1Q8TCU4 LINC00839-202ENST00000429940 2253 ntTSL 2 BASIC8.85□□□□□ -0.99
ALMS1Q8TCU4 ANKLE2-210ENST00000542657 2446 ntTSL 2 BASIC8.85□□□□□ -0.99
ALMS1Q8TCU4 GGACT-201ENST00000376250 2804 ntAPPRIS P1 TSL 3 BASIC8.85□□□□□ -0.99
ALMS1Q8TCU4 MPZL1-201ENST00000359523 5010 ntAPPRIS P1 TSL 1 (best) BASIC8.85□□□□□ -0.99
ALMS1Q8TCU4 PSMD9-207ENST00000541212 2784 ntAPPRIS P2 TSL 1 (best) BASIC8.85□□□□□ -0.99
ALMS1Q8TCU4 VRK3-202ENST00000377011 1749 ntAPPRIS ALT2 TSL 5 BASIC8.85□□□□□ -0.99
ALMS1Q8TCU4 AL353801.2-201ENST00000436877 1444 ntTSL 5 BASIC8.85□□□□□ -0.99
ALMS1Q8TCU4 TP73-205ENST00000378285 2117 ntTSL 1 (best) BASIC8.85□□□□□ -0.99
ALMS1Q8TCU4 IGLV3-21-201ENST00000390308 602 ntAPPRIS P1 BASIC8.85□□□□□ -0.99
ALMS1Q8TCU4 HLA-DRB6-202ENST00000437183 1090 ntBASIC8.85□□□□□ -0.99
ALMS1Q8TCU4 PHKG1-210ENST00000537360 2139 ntAPPRIS ALT1 TSL 1 (best) BASIC8.85□□□□□ -0.99
ALMS1Q8TCU4 FXYD3-212ENST00000605550 590 ntTSL 4 BASIC8.85□□□□□ -0.99
ALMS1Q8TCU4 GOLGA8IP-202ENST00000611635 2100 ntBASIC8.85□□□□□ -0.99
ALMS1Q8TCU4 AC091807.1-201ENST00000418838 1544 ntBASIC8.85□□□□□ -0.99
ALMS1Q8TCU4 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC8.85□□□□□ -0.99
ALMS1Q8TCU4 AC009093.9-201ENST00000566038 1611 ntBASIC8.85□□□□□ -0.99
ALMS1Q8TCU4 CLUHP8-201ENST00000547527 1485 ntBASIC8.85□□□□□ -0.99
ALMS1Q8TCU4 DDX43-201ENST00000370336 2513 ntAPPRIS P1 TSL 1 (best) BASIC8.85□□□□□ -0.99
ALMS1Q8TCU4 GHRL-201ENST00000287656 1313 ntAPPRIS ALT1 TSL 1 (best) BASIC8.85□□□□□ -0.99
ALMS1Q8TCU4 PVR-202ENST00000344956 3166 ntAPPRIS ALT2 TSL 5 BASIC8.85□□□□□ -0.99
ALMS1Q8TCU4 OSGIN1-201ENST00000343939 2391 ntTSL 2 BASIC8.85□□□□□ -0.99
ALMS1Q8TCU4 GRB7-203ENST00000394209 1955 ntAPPRIS P1 TSL 2 BASIC8.85□□□□□ -0.99
ALMS1Q8TCU4 PHF19-203ENST00000419155 3525 ntTSL 2 BASIC8.85□□□□□ -0.99
ALMS1Q8TCU4 MEIS2-215ENST00000559561 1442 ntAPPRIS ALT1 TSL 5 BASIC8.85□□□□□ -0.99
ALMS1Q8TCU4 WIZ-206ENST00000599686 3644 ntTSL 5 BASIC8.85□□□□□ -0.99
ALMS1Q8TCU4 GSTA4-201ENST00000370959 793 ntAPPRIS P1 TSL 5 BASIC8.85□□□□□ -0.99
ALMS1Q8TCU4 DMKN-202ENST00000392206 458 ntAPPRIS ALT2 TSL 2 BASIC8.85□□□□□ -0.99
ALMS1Q8TCU4 RPL10P12-201ENST00000427342 318 ntBASIC8.85□□□□□ -0.99
ALMS1Q8TCU4 AC002451.1-202ENST00000432265 771 ntTSL 2 BASIC8.85□□□□□ -0.99
ALMS1Q8TCU4 AC103925.1-201ENST00000453155 771 ntTSL 3 BASIC8.85□□□□□ -0.99
ALMS1Q8TCU4 AC096919.1-201ENST00000472730 652 ntBASIC8.85□□□□□ -0.99
ALMS1Q8TCU4 PSMD7-205ENST00000568615 931 ntTSL 2 BASIC8.85□□□□□ -0.99
ALMS1Q8TCU4 MIR4296-201ENST00000581038 88 ntBASIC8.85□□□□□ -0.99
ALMS1Q8TCU4 AC069366.2-201ENST00000583643 430 ntBASIC8.85□□□□□ -0.99
ALMS1Q8TCU4 uc_338.24-201ENST00000617802 182 ntBASIC8.85□□□□□ -0.99
ALMS1Q8TCU4 DTX3-202ENST00000548198 3199 ntAPPRIS P3 TSL 2 BASIC8.85□□□□□ -0.99
ALMS1Q8TCU4 WDR20-203ENST00000335263 2616 ntTSL 1 (best) BASIC8.85□□□□□ -0.99
ALMS1Q8TCU4 C1QTNF9-202ENST00000382071 1854 ntAPPRIS P1 TSL 5 BASIC8.85□□□□□ -0.99
ALMS1Q8TCU4 AL109615.2-201ENST00000455005 1608 ntTSL 1 (best) BASIC8.85□□□□□ -0.99
ALMS1Q8TCU4 CADPS-219ENST00000612439 5455 ntTSL 1 (best) BASIC8.85□□□□□ -0.99
ALMS1Q8TCU4 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC8.85□□□□□ -0.99
ALMS1Q8TCU4 ARNT2-204ENST00000527771 2458 ntAPPRIS ALT1 TSL 2 BASIC8.85□□□□□ -0.99
ALMS1Q8TCU4 SIRT1-201ENST00000212015 4094 ntAPPRIS P1 TSL 1 (best) BASIC8.85□□□□□ -0.99
ALMS1Q8TCU4 BX005132.1-201ENST00000641403 1580 ntBASIC8.85□□□□□ -0.99
ALMS1Q8TCU4 IL17RB-201ENST00000288167 2010 ntAPPRIS P1 TSL 1 (best) BASIC8.84□□□□□ -0.99
ALMS1Q8TCU4 CACNA1H-202ENST00000358590 8069 ntAPPRIS ALT2 TSL 5 BASIC8.84□□□□□ -0.99
ALMS1Q8TCU4 DNAAF5-201ENST00000297440 3410 ntAPPRIS P2 TSL 1 (best) BASIC8.84□□□□□ -0.99
ALMS1Q8TCU4 MAP2K1-201ENST00000307102 3410 ntAPPRIS P1 TSL 1 (best) BASIC8.84□□□□□ -0.99
ALMS1Q8TCU4 SMN1-202ENST00000380707 1536 ntAPPRIS P3 TSL 1 (best) BASIC8.84□□□□□ -0.99
ALMS1Q8TCU4 SMN2-203ENST00000380743 1536 ntAPPRIS P4 TSL 1 (best) BASIC8.84□□□□□ -0.99
ALMS1Q8TCU4 AC107375.1-201ENST00000564464 2231 ntBASIC8.84□□□□□ -0.99
ALMS1Q8TCU4 LYSMD4-204ENST00000409796 2672 ntAPPRIS P1 TSL 1 (best) BASIC8.84□□□□□ -0.99
ALMS1Q8TCU4 OR8B8-201ENST00000328064 1033 ntAPPRIS P1 BASIC8.84□□□□□ -0.99
ALMS1Q8TCU4 TPT1-203ENST00000379056 1101 ntTSL 1 (best) BASIC8.84□□□□□ -0.99
ALMS1Q8TCU4 LINC01128-201ENST00000415295 894 ntTSL 1 (best) BASIC8.84□□□□□ -0.99
ALMS1Q8TCU4 CD63-212ENST00000552067 621 ntTSL 5 BASIC8.84□□□□□ -0.99
ALMS1Q8TCU4 DEGS2-202ENST00000553834 421 ntTSL 3 BASIC8.84□□□□□ -0.99
ALMS1Q8TCU4 AL357137.1-201ENST00000604645 203 ntBASIC8.84□□□□□ -0.99
ALMS1Q8TCU4 Metazoa_SRP.85-201ENST00000610909 260 ntBASIC8.84□□□□□ -0.99
ALMS1Q8TCU4 TMPRSS3-204ENST00000433957 2403 ntAPPRIS ALT1 TSL 1 (best) BASIC8.84□□□□□ -0.99
ALMS1Q8TCU4 ABHD15-201ENST00000307201 3592 ntAPPRIS P1 TSL 1 (best) BASIC8.84□□□□□ -0.99
ALMS1Q8TCU4 RPUSD4-208ENST00000533628 2053 ntTSL 1 (best) BASIC8.84□□□□□ -0.99
ALMS1Q8TCU4 MEG8-220ENST00000636052 1369 ntTSL 5 BASIC8.84□□□□□ -0.99
ALMS1Q8TCU4 WASHC1-201ENST00000442898 1827 ntAPPRIS P1 TSL 2 BASIC8.84□□□□□ -0.99
ALMS1Q8TCU4 APP-204ENST00000357903 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC8.84□□□□□ -0.99
ALMS1Q8TCU4 CNOT10-201ENST00000328834 2815 ntAPPRIS P1 TSL 1 (best) BASIC8.84□□□□□ -0.99
ALMS1Q8TCU4 FAM183BP-201ENST00000409072 1595 ntBASIC8.84□□□□□ -0.99
ALMS1Q8TCU4 GMPR2-224ENST00000559910 1562 ntTSL 5 BASIC8.84□□□□□ -0.99
ALMS1Q8TCU4 HOXB3-205ENST00000470495 4208 ntAPPRIS P1 TSL 1 (best) BASIC8.84□□□□□ -0.99
ALMS1Q8TCU4 APTX-201ENST00000309615 1859 ntTSL 1 (best) BASIC8.84□□□□□ -0.99
ALMS1Q8TCU4 PSG8-AS1-201ENST00000425668 1873 ntTSL 2 BASIC8.84□□□□□ -0.99
Retrieved 100 of 98,524 protein–RNA pairs in 79.3 ms