Protein–RNA interactions for Protein: Q8N7P3

CLDN22, Claudin-22, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN22Q8N7P3 RNH1-224ENST00000534797 2973 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
CLDN22Q8N7P3 CCT6P3-201ENST00000419314 3702 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
CLDN22Q8N7P3 AC027369.3-201ENST00000530465 3707 ntBASIC12.63□□□□□ -0.39
CLDN22Q8N7P3 BTRC-202ENST00000370187 6134 ntAPPRIS P4 TSL 1 (best) BASIC12.63□□□□□ -0.39
CLDN22Q8N7P3 PLXNB2-201ENST00000359337 6335 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
CLDN22Q8N7P3 SHC1-202ENST00000368445 3472 ntAPPRIS ALT1 TSL 1 (best) BASIC12.63□□□□□ -0.39
CLDN22Q8N7P3 KLHL9-201ENST00000359039 5710 ntAPPRIS P1 BASIC12.63□□□□□ -0.39
CLDN22Q8N7P3 ELN-211ENST00000414324 3139 ntAPPRIS ALT2 TSL 2 BASIC12.63□□□□□ -0.39
CLDN22Q8N7P3 BRD7P5-201ENST00000299197 1822 ntBASIC12.63□□□□□ -0.39
CLDN22Q8N7P3 BX324167.2-201ENST00000623717 3316 ntBASIC12.63□□□□□ -0.39
CLDN22Q8N7P3 GUCY1B2-205ENST00000532104 1912 ntTSL 2 BASIC12.63□□□□□ -0.39
CLDN22Q8N7P3 ZNF239-205ENST00000535642 1904 ntAPPRIS P1 TSL 2 BASIC12.63□□□□□ -0.39
CLDN22Q8N7P3 LINC01679-201ENST00000442815 2798 ntTSL 3 BASIC12.63□□□□□ -0.39
CLDN22Q8N7P3 CNKSR3-204ENST00000479339 2023 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
CLDN22Q8N7P3 GOPC-202ENST00000368498 4450 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
CLDN22Q8N7P3 VILL-201ENST00000283713 2970 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
CLDN22Q8N7P3 SH3BGRL3-202ENST00000319041 768 ntTSL 2 BASIC12.63□□□□□ -0.39
CLDN22Q8N7P3 FAM86C1-202ENST00000359244 2110 ntAPPRIS ALT2 TSL 2 BASIC12.63□□□□□ -0.39
CLDN22Q8N7P3 DPM3-202ENST00000368399 517 ntBASIC12.63□□□□□ -0.39
CLDN22Q8N7P3 NPPA-201ENST00000376476 728 ntTSL 3 BASIC12.63□□□□□ -0.39
CLDN22Q8N7P3 BAX-205ENST00000391871 687 ntTSL 5 BASIC12.63□□□□□ -0.39
CLDN22Q8N7P3 KRTAP10-13P-201ENST00000412914 571 ntBASIC12.63□□□□□ -0.39
CLDN22Q8N7P3 LINC01756-201ENST00000417651 2148 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
CLDN22Q8N7P3 AL139125.1-201ENST00000420395 557 ntTSL 3 BASIC12.63□□□□□ -0.39
CLDN22Q8N7P3 LINC01665-201ENST00000422917 1241 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
CLDN22Q8N7P3 OARD1-212ENST00000482515 832 ntTSL 2 BASIC12.63□□□□□ -0.39
CLDN22Q8N7P3 ATG10-207ENST00000513443 978 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
CLDN22Q8N7P3 AC015689.1-201ENST00000525365 462 ntTSL 2 BASIC12.63□□□□□ -0.39
CLDN22Q8N7P3 AL163974.1-201ENST00000554540 466 ntTSL 5 BASIC12.63□□□□□ -0.39
CLDN22Q8N7P3 AL133153.2-201ENST00000557524 303 ntTSL 3 BASIC12.63□□□□□ -0.39
CLDN22Q8N7P3 AL132711.1-201ENST00000557546 722 ntTSL 3 BASIC12.63□□□□□ -0.39
CLDN22Q8N7P3 ANP32A-210ENST00000560303 724 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
CLDN22Q8N7P3 LRRC37A6P-204ENST00000575554 573 ntTSL 3 BASIC12.63□□□□□ -0.39
CLDN22Q8N7P3 MIR3615-201ENST00000581999 87 ntBASIC12.63□□□□□ -0.39
CLDN22Q8N7P3 RN7SL163P-201ENST00000583100 276 ntBASIC12.63□□□□□ -0.39
CLDN22Q8N7P3 AP005264.3-201ENST00000592370 485 ntTSL 5 BASIC12.63□□□□□ -0.39
CLDN22Q8N7P3 MAP3K14-AS1-210ENST00000592422 831 ntTSL 3 BASIC12.63□□□□□ -0.39
CLDN22Q8N7P3 AL354740.1-203ENST00000593917 424 ntTSL 3 BASIC12.63□□□□□ -0.39
CLDN22Q8N7P3 BX537318.1-201ENST00000608290 1207 ntTSL 5 BASIC12.63□□□□□ -0.39
CLDN22Q8N7P3 NPPA-203ENST00000610706 849 ntAPPRIS ALT1 TSL 5 BASIC12.63□□□□□ -0.39
CLDN22Q8N7P3 STPG3-204ENST00000611378 1015 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
CLDN22Q8N7P3 AC091271.1-201ENST00000611877 1162 ntBASIC12.63□□□□□ -0.39
CLDN22Q8N7P3 AL157813.1-201ENST00000612996 587 ntBASIC12.63□□□□□ -0.39
CLDN22Q8N7P3 SUPT4H1-201ENST00000225504 1489 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
CLDN22Q8N7P3 RAB18-208ENST00000611151 4931 ntTSL 5 BASIC12.63□□□□□ -0.39
CLDN22Q8N7P3 RIPK4-201ENST00000332512 3889 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
CLDN22Q8N7P3 SVOPL-203ENST00000421622 1653 ntTSL 5 BASIC12.63□□□□□ -0.39
CLDN22Q8N7P3 KIAA1161-201ENST00000297625 6398 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
CLDN22Q8N7P3 MAP3K4-203ENST00000366920 5445 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
CLDN22Q8N7P3 PRPF40B-209ENST00000548825 3307 ntAPPRIS P2 TSL 5 BASIC12.63□□□□□ -0.39
CLDN22Q8N7P3 LSM14A-201ENST00000433627 3424 ntAPPRIS ALT1 TSL 1 (best) BASIC12.63□□□□□ -0.39
CLDN22Q8N7P3 PPT1-204ENST00000439754 2195 ntTSL 3 BASIC12.63□□□□□ -0.39
CLDN22Q8N7P3 ZMIZ2-206ENST00000441627 5089 ntAPPRIS P4 TSL 1 (best) BASIC12.63□□□□□ -0.39
CLDN22Q8N7P3 RPS15A-213ENST00000576436 2190 ntTSL 4 BASIC12.63□□□□□ -0.39
CLDN22Q8N7P3 DNAJB8-201ENST00000319153 2465 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
CLDN22Q8N7P3 NEU3-204ENST00000531509 2468 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
CLDN22Q8N7P3 FXYD3-208ENST00000604404 1322 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
CLDN22Q8N7P3 SCAF4-201ENST00000286835 4193 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
CLDN22Q8N7P3 AP1B1-202ENST00000357586 4176 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
CLDN22Q8N7P3 TRMT1L-201ENST00000367506 4392 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
CLDN22Q8N7P3 EHF-212ENST00000533754 1501 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
CLDN22Q8N7P3 CNTLN-201ENST00000380641 4871 ntAPPRIS ALT2 TSL 2 BASIC12.62□□□□□ -0.39
CLDN22Q8N7P3 SERPINA13P-201ENST00000469935 1718 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
CLDN22Q8N7P3 AC009542.1-201ENST00000412549 1810 ntTSL 2 BASIC12.62□□□□□ -0.39
CLDN22Q8N7P3 TNFSF8-201ENST00000223795 1906 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
CLDN22Q8N7P3 AC245140.2-201ENST00000624054 1939 ntBASIC12.62□□□□□ -0.39
CLDN22Q8N7P3 IKBKB-218ENST00000520835 2403 ntTSL 2 BASIC12.62□□□□□ -0.39
CLDN22Q8N7P3 DDX50-201ENST00000373585 2538 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
CLDN22Q8N7P3 KIF3A-208ENST00000618515 3333 ntTSL 5 BASIC12.62□□□□□ -0.39
CLDN22Q8N7P3 NTSR1-201ENST00000370501 4132 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
CLDN22Q8N7P3 ST5-256ENST00000534127 4545 ntAPPRIS P4 TSL 1 (best) BASIC12.62□□□□□ -0.39
CLDN22Q8N7P3 RAPGEF4-AS1-202ENST00000435328 4625 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
CLDN22Q8N7P3 EMC10-201ENST00000334976 9446 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
CLDN22Q8N7P3 ABCB8-202ENST00000358849 4683 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
CLDN22Q8N7P3 CIITA-213ENST00000618327 4657 ntAPPRIS ALT2 TSL 2 BASIC12.62□□□□□ -0.39
CLDN22Q8N7P3 SNX25-201ENST00000264694 3264 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
CLDN22Q8N7P3 FBRSL1-205ENST00000542061 3175 ntAPPRIS ALT2 TSL 2 BASIC12.62□□□□□ -0.39
CLDN22Q8N7P3 NRROS-201ENST00000328557 2564 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
CLDN22Q8N7P3 FAM90A26-201ENST00000512047 2492 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
CLDN22Q8N7P3 PRUNE1-205ENST00000368937 1850 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
CLDN22Q8N7P3 SARS2-202ENST00000430193 1886 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
CLDN22Q8N7P3 LYRM9-202ENST00000379103 1685 ntAPPRIS P1 TSL 3 BASIC12.62□□□□□ -0.39
CLDN22Q8N7P3 SLC35G2-201ENST00000393079 1577 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
CLDN22Q8N7P3 LINC01029-204ENST00000583106 1465 ntTSL 5 BASIC12.62□□□□□ -0.39
CLDN22Q8N7P3 LINC00969-231ENST00000597482 1476 ntTSL 5 BASIC12.62□□□□□ -0.39
CLDN22Q8N7P3 PHYHD1-202ENST00000353176 1374 ntTSL 5 BASIC12.62□□□□□ -0.39
CLDN22Q8N7P3 RPL18A-205ENST00000600147 1391 ntTSL 5 BASIC12.62□□□□□ -0.39
CLDN22Q8N7P3 ABHD4-201ENST00000216327 716 ntTSL 5 BASIC12.62□□□□□ -0.39
CLDN22Q8N7P3 BX679664.3-201ENST00000414070 555 ntBASIC12.62□□□□□ -0.39
CLDN22Q8N7P3 KLC4-205ENST00000458460 1251 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
CLDN22Q8N7P3 AC113935.1-201ENST00000471722 555 ntBASIC12.62□□□□□ -0.39
CLDN22Q8N7P3 ROPN1-207ENST00000484329 566 ntTSL 3 BASIC12.62□□□□□ -0.39
CLDN22Q8N7P3 AC044849.1-201ENST00000519737 1188 ntBASIC12.62□□□□□ -0.39
CLDN22Q8N7P3 WDYHV1-206ENST00000523356 869 ntTSL 3 BASIC12.62□□□□□ -0.39
CLDN22Q8N7P3 AC009779.1-201ENST00000551138 283 ntBASIC12.62□□□□□ -0.39
CLDN22Q8N7P3 AC120498.1-201ENST00000563593 476 ntTSL 4 BASIC12.62□□□□□ -0.39
CLDN22Q8N7P3 Six3os1_5.1-201ENST00000611000 271 ntBASIC12.62□□□□□ -0.39
CLDN22Q8N7P3 THAP4-206ENST00000612200 969 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
CLDN22Q8N7P3 SMIM11B-202ENST00000619874 843 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
CLDN22Q8N7P3 AC079336.7-201ENST00000623428 1078 ntBASIC12.62□□□□□ -0.39
Retrieved 100 of 98,524 protein–RNA pairs in 83.5 ms