Protein–RNA interactions for Protein: P43307

SSR1, Translocon-associated protein subunit alpha, humanhuman

Known RBP Predictions only

Length 286 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1P43307 SMYD4-201ENST00000305513 4384 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
SSR1P43307 UMODL1-205ENST00000408910 4878 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
SSR1P43307 C7orf65-201ENST00000408988 2911 ntTSL 2 BASIC14.84□□□□□ -0.03
SSR1P43307 KLHL7-202ENST00000339077 5620 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
SSR1P43307 SELENOV-202ENST00000423711 1701 ntTSL 5 BASIC14.84□□□□□ -0.03
SSR1P43307 SNCAIP-222ENST00000542191 2729 ntTSL 5 BASIC14.84□□□□□ -0.03
SSR1P43307 HDLBP-214ENST00000427183 6238 ntTSL 2 BASIC14.84□□□□□ -0.03
SSR1P43307 CATSPERE-202ENST00000366533 3019 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
SSR1P43307 CNN2-202ENST00000348419 2033 ntTSL 2 BASIC14.84□□□□□ -0.03
SSR1P43307 CNKSR3-204ENST00000479339 2023 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
SSR1P43307 MRPL53-201ENST00000258105 1162 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
SSR1P43307 NAA10-201ENST00000370009 837 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
SSR1P43307 NAA10-203ENST00000370015 1002 ntTSL 5 BASIC14.84□□□□□ -0.03
SSR1P43307 TREM2-203ENST00000373122 1012 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
SSR1P43307 AL391647.1-201ENST00000395664 511 ntBASIC14.84□□□□□ -0.03
SSR1P43307 AC078875.1-201ENST00000431907 724 ntBASIC14.84□□□□□ -0.03
SSR1P43307 PTPA-218ENST00000435132 618 ntTSL 2 BASIC14.84□□□□□ -0.03
SSR1P43307 AC114488.1-201ENST00000435872 591 ntTSL 3 BASIC14.84□□□□□ -0.03
SSR1P43307 SGO1-AS1-201ENST00000441442 499 ntTSL 4 BASIC14.84□□□□□ -0.03
SSR1P43307 AL139412.1-202ENST00000452465 675 ntTSL 3 BASIC14.84□□□□□ -0.03
SSR1P43307 AC005740.2-201ENST00000511085 419 ntBASIC14.84□□□□□ -0.03
SSR1P43307 AC011365.2-201ENST00000520041 810 ntTSL 5 BASIC14.84□□□□□ -0.03
SSR1P43307 AC084859.1-201ENST00000533002 670 ntTSL 4 BASIC14.84□□□□□ -0.03
SSR1P43307 GFER-204ENST00000567719 483 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
SSR1P43307 CEP95-212ENST00000581056 903 ntAPPRIS ALT2 TSL 2 BASIC14.84□□□□□ -0.03
SSR1P43307 NFIC-204ENST00000586919 1221 ntTSL 5 BASIC14.84□□□□□ -0.03
SSR1P43307 PRKN-211ENST00000615065 261 ntTSL 5 BASIC14.84□□□□□ -0.03
SSR1P43307 AC022748.3-201ENST00000621828 275 ntBASIC14.84□□□□□ -0.03
SSR1P43307 SYNE2-228ENST00000639659 1290 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
SSR1P43307 AC068587.8-201ENST00000641239 219 ntBASIC14.84□□□□□ -0.03
SSR1P43307 TRPM2-201ENST00000300481 5627 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
SSR1P43307 ABCA2-202ENST00000341511 8063 ntAPPRIS P2 TSL 5 BASIC14.84□□□□□ -0.03
SSR1P43307 RARS2-201ENST00000369536 1818 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
SSR1P43307 GOLGA6L10-209ENST00000621197 4160 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
SSR1P43307 IGHG1-202ENST00000390548 2619 ntAPPRIS P5 BASIC14.84□□□□□ -0.03
SSR1P43307 TUBB4AP1-201ENST00000450755 1325 ntBASIC14.84□□□□□ -0.03
SSR1P43307 MARK1-201ENST00000366917 2946 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
SSR1P43307 KCNJ5-202ENST00000529694 5940 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
SSR1P43307 HMGCS2-201ENST00000369406 2428 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
SSR1P43307 PLEKHM1P1-202ENST00000578036 4318 ntTSL 2 BASIC14.84□□□□□ -0.03
SSR1P43307 LIMS2-206ENST00000409754 1620 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
SSR1P43307 GUSBP11-206ENST00000455485 3816 ntTSL 2 BASIC14.84□□□□□ -0.03
SSR1P43307 AL008727.1-201ENST00000564460 4728 ntTSL 2 BASIC14.84□□□□□ -0.03
SSR1P43307 SLC43A3-214ENST00000529554 2207 ntAPPRIS P3 TSL 2 BASIC14.84□□□□□ -0.03
SSR1P43307 ARHGAP45-210ENST00000590214 4191 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
SSR1P43307 GK-205ENST00000378946 3638 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
SSR1P43307 KLHL34-201ENST00000379499 3641 ntAPPRIS P1 BASIC14.84□□□□□ -0.03
SSR1P43307 RC3H2-205ENST00000423239 3623 ntTSL 5 BASIC14.84□□□□□ -0.03
SSR1P43307 PPHLN1-206ENST00000395580 1693 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
SSR1P43307 MRPL17-201ENST00000288937 1969 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
SSR1P43307 LINC02346-201ENST00000383019 1967 ntTSL 2 BASIC14.84□□□□□ -0.03
SSR1P43307 ENO2-205ENST00000535366 2827 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
SSR1P43307 CCDC117-201ENST00000249064 3985 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
SSR1P43307 RBM10-202ENST00000345781 3108 ntAPPRIS ALT2 TSL 2 BASIC14.83□□□□□ -0.03
SSR1P43307 FIBCD1-204ENST00000448616 3119 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.03
SSR1P43307 LINC00511-213ENST00000581549 2265 ntTSL 2 BASIC14.83□□□□□ -0.03
SSR1P43307 SAMD15-201ENST00000216471 2564 ntAPPRIS P1 TSL 2 BASIC14.83□□□□□ -0.03
SSR1P43307 TGFBR3-204ENST00000465892 2908 ntAPPRIS ALT1 TSL 1 (best) BASIC14.83□□□□□ -0.03
SSR1P43307 DNAJA4-203ENST00000394855 3245 ntTSL 1 (best) BASIC14.83□□□□□ -0.03
SSR1P43307 PSMD12-201ENST00000356126 4406 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
SSR1P43307 ERLIN1-202ENST00000407654 1453 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
SSR1P43307 LPO-204ENST00000543544 2350 ntTSL 2 BASIC14.83□□□□□ -0.03
SSR1P43307 URGCP-201ENST00000336086 5658 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.03
SSR1P43307 SEMA4D-212ENST00000450295 5684 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
SSR1P43307 LPO-203ENST00000421678 2729 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
SSR1P43307 IL18BP-205ENST00000393705 1549 ntAPPRIS P2 TSL 1 (best) BASIC14.83□□□□□ -0.04
SSR1P43307 SIRPA-204ENST00000622179 4570 ntAPPRIS ALT1 TSL 5 BASIC14.83□□□□□ -0.04
SSR1P43307 HNRNPH1-202ENST00000356731 3667 ntAPPRIS P1 TSL 2 BASIC14.83□□□□□ -0.04
SSR1P43307 TRIM37-201ENST00000262294 4330 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
SSR1P43307 SMU1-201ENST00000397149 7122 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
SSR1P43307 LIMK1-208ENST00000538333 2170 ntTSL 2 BASIC14.83□□□□□ -0.04
SSR1P43307 CASC4-202ENST00000345795 3764 ntAPPRIS ALT1 TSL 1 (best) BASIC14.83□□□□□ -0.04
SSR1P43307 AC009474.1-201ENST00000455096 1565 ntBASIC14.83□□□□□ -0.04
SSR1P43307 XRRA1-207ENST00000527087 2505 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
SSR1P43307 ACADM-218ENST00000541113 2535 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
SSR1P43307 UBN1-202ENST00000396658 6336 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
SSR1P43307 LGALS2-201ENST00000215886 591 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
SSR1P43307 RPS3-201ENST00000278572 907 ntTSL 3 BASIC14.83□□□□□ -0.04
SSR1P43307 APOC3-202ENST00000375345 604 ntTSL 5 BASIC14.83□□□□□ -0.04
SSR1P43307 MKX-201ENST00000375790 3846 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
SSR1P43307 LRRC30-201ENST00000383467 923 ntAPPRIS P1 BASIC14.83□□□□□ -0.04
SSR1P43307 BRWD1P1-201ENST00000401091 371 ntBASIC14.83□□□□□ -0.04
SSR1P43307 KRTAP10-13P-201ENST00000412914 571 ntBASIC14.83□□□□□ -0.04
SSR1P43307 LINC01694-201ENST00000424569 821 ntTSL 5 BASIC14.83□□□□□ -0.04
SSR1P43307 AL591846.1-201ENST00000451736 433 ntBASIC14.83□□□□□ -0.04
SSR1P43307 EIF4HP1-201ENST00000453115 687 ntBASIC14.83□□□□□ -0.04
SSR1P43307 MPZL1-209ENST00000474859 630 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
SSR1P43307 AC005586.1-201ENST00000488310 577 ntTSL 4 BASIC14.83□□□□□ -0.04
SSR1P43307 GOLGA2P8-201ENST00000505201 779 ntBASIC14.83□□□□□ -0.04
SSR1P43307 FAM8A2P-201ENST00000528813 1142 ntBASIC14.83□□□□□ -0.04
SSR1P43307 AL583810.1-201ENST00000553344 1045 ntBASIC14.83□□□□□ -0.04
SSR1P43307 AL132639.2-202ENST00000553520 467 ntTSL 2 BASIC14.83□□□□□ -0.04
SSR1P43307 AC010754.1-201ENST00000582300 1061 ntTSL 3 BASIC14.83□□□□□ -0.04
SSR1P43307 TECR-207ENST00000596073 1170 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
SSR1P43307 TUBB4A-212ENST00000601152 590 ntTSL 4 BASIC14.83□□□□□ -0.04
SSR1P43307 ABBA01031663.1-201ENST00000635630 790 ntBASIC14.83□□□□□ -0.04
SSR1P43307 GAP43-202ENST00000393780 1901 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
SSR1P43307 ORC6-201ENST00000219097 1628 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
SSR1P43307 PCDHGB1-201ENST00000523390 4590 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
SSR1P43307 OFD1-201ENST00000340096 3611 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 65.9 ms