Protein–RNA interactions for Protein: F8WFD2

NPIPA3, Nuclear pore complex-interacting protein family member A3, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA3F8WFD2 SLC20A2-207ENST00000520179 2284 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
NPIPA3F8WFD2 CASC10-201ENST00000377113 3801 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
NPIPA3F8WFD2 SEC13-202ENST00000350697 1425 ntAPPRIS P2 TSL 1 (best) BASIC12.64□□□□□ -0.39
NPIPA3F8WFD2 CEP250-201ENST00000397524 1419 ntTSL 5 BASIC12.64□□□□□ -0.39
NPIPA3F8WFD2 ZNF663P-201ENST00000400371 2722 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
NPIPA3F8WFD2 HERPUD1-203ENST00000379792 1782 ntTSL 5 BASIC12.64□□□□□ -0.39
NPIPA3F8WFD2 DLGAP1-205ENST00000400150 5332 ntTSL 5 BASIC12.64□□□□□ -0.39
NPIPA3F8WFD2 CACNA1G-214ENST00000505165 6633 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
NPIPA3F8WFD2 CACNA1G-220ENST00000507896 6600 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
NPIPA3F8WFD2 SEZ6L-206ENST00000404234 3444 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
NPIPA3F8WFD2 RNF41-202ENST00000394013 2452 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
NPIPA3F8WFD2 MED22-209ENST00000610888 3867 ntAPPRIS ALT1 TSL 1 (best) BASIC12.64□□□□□ -0.39
NPIPA3F8WFD2 WDSUB1-201ENST00000358147 1535 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
NPIPA3F8WFD2 MPP2-219ENST00000612133 4938 ntTSL 5 BASIC12.64□□□□□ -0.39
NPIPA3F8WFD2 CHEK2-201ENST00000328354 1867 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
NPIPA3F8WFD2 MTMR4-204ENST00000579925 5622 ntTSL 5 BASIC12.64□□□□□ -0.39
NPIPA3F8WFD2 TRAF3-202ENST00000351691 2239 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
NPIPA3F8WFD2 MED15-203ENST00000382974 2235 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
NPIPA3F8WFD2 C1R-201ENST00000535233 2211 ntTSL 2 BASIC12.64□□□□□ -0.39
NPIPA3F8WFD2 DNER-201ENST00000341772 3260 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
NPIPA3F8WFD2 ZNF785-201ENST00000395216 3282 ntAPPRIS P2 TSL 1 (best) BASIC12.64□□□□□ -0.39
NPIPA3F8WFD2 ZNF75A-205ENST00000574298 2347 ntAPPRIS P1 TSL 2 BASIC12.64□□□□□ -0.39
NPIPA3F8WFD2 PREX1-201ENST00000371941 6636 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
NPIPA3F8WFD2 GOT2-202ENST00000434819 1615 ntTSL 2 BASIC12.64□□□□□ -0.39
NPIPA3F8WFD2 POLR2L-201ENST00000322028 892 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
NPIPA3F8WFD2 FAM163B-201ENST00000356873 1131 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
NPIPA3F8WFD2 FLJ37035-201ENST00000419400 446 ntTSL 3 BASIC12.64□□□□□ -0.39
NPIPA3F8WFD2 VEGFB-202ENST00000426086 979 ntAPPRIS ALT1 TSL 1 (best) BASIC12.64□□□□□ -0.39
NPIPA3F8WFD2 AL663074.1-201ENST00000436642 299 ntTSL 3 BASIC12.64□□□□□ -0.39
NPIPA3F8WFD2 TEX36-AS1-202ENST00000446081 749 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
NPIPA3F8WFD2 AL356218.1-201ENST00000450864 353 ntTSL 3 BASIC12.64□□□□□ -0.39
NPIPA3F8WFD2 ATP1A4-205ENST00000470705 886 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
NPIPA3F8WFD2 LINC00634-202ENST00000505157 222 ntBASIC12.64□□□□□ -0.39
NPIPA3F8WFD2 AC108474.1-201ENST00000507776 421 ntTSL 3 BASIC12.64□□□□□ -0.39
NPIPA3F8WFD2 AC022182.2-201ENST00000525556 859 ntTSL 2 BASIC12.64□□□□□ -0.39
NPIPA3F8WFD2 DCTPP1-202ENST00000565758 749 ntTSL 3 BASIC12.64□□□□□ -0.39
NPIPA3F8WFD2 MIR5196-201ENST00000578146 115 ntBASIC12.64□□□□□ -0.39
NPIPA3F8WFD2 AC145207.8-201ENST00000580897 563 ntTSL 4 BASIC12.64□□□□□ -0.39
NPIPA3F8WFD2 AC061992.1-201ENST00000592569 777 ntTSL 3 BASIC12.64□□□□□ -0.39
NPIPA3F8WFD2 ZNF528-AS1-202ENST00000596746 929 ntTSL 5 BASIC12.64□□□□□ -0.39
NPIPA3F8WFD2 AC011462.2-201ENST00000598887 344 ntTSL 5 BASIC12.64□□□□□ -0.39
NPIPA3F8WFD2 CR589904.1-202ENST00000611154 660 ntTSL 5 BASIC12.64□□□□□ -0.39
NPIPA3F8WFD2 AC138466.5-201ENST00000624002 808 ntBASIC12.64□□□□□ -0.39
NPIPA3F8WFD2 SLC12A5-219ENST00000628272 401 ntTSL 3 BASIC12.64□□□□□ -0.39
NPIPA3F8WFD2 LINC00431-202ENST00000636375 159 ntBASIC12.64□□□□□ -0.39
NPIPA3F8WFD2 DFFA-202ENST00000377038 6032 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
NPIPA3F8WFD2 AGAP10P-201ENST00000454844 2418 ntBASIC12.64□□□□□ -0.39
NPIPA3F8WFD2 PNPLA5-201ENST00000216177 2539 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
NPIPA3F8WFD2 ZFP64-203ENST00000361387 2545 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
NPIPA3F8WFD2 IL1RN-201ENST00000259206 1810 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
NPIPA3F8WFD2 PRCP-201ENST00000313010 3090 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
NPIPA3F8WFD2 NCOR2-204ENST00000405201 8533 ntAPPRIS P4 TSL 1 (best) BASIC12.64□□□□□ -0.39
NPIPA3F8WFD2 MAPK12-203ENST00000395780 1459 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
NPIPA3F8WFD2 CKMT2-203ENST00000437669 1479 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
NPIPA3F8WFD2 RCC2P1-201ENST00000452257 1476 ntBASIC12.64□□□□□ -0.39
NPIPA3F8WFD2 ASXL1-201ENST00000306058 6591 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
NPIPA3F8WFD2 PBRM1-204ENST00000394830 5071 ntAPPRIS P2 TSL 1 (best) BASIC12.64□□□□□ -0.39
NPIPA3F8WFD2 DUOX2-201ENST00000389039 6533 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
NPIPA3F8WFD2 TMEM26-202ENST00000399298 5151 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
NPIPA3F8WFD2 RBP3-201ENST00000584701 4276 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
NPIPA3F8WFD2 AC148477.2-201ENST00000537762 3039 ntTSL 3 BASIC12.64□□□□□ -0.39
NPIPA3F8WFD2 GFRA1-201ENST00000355422 2583 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
NPIPA3F8WFD2 STXBP6-202ENST00000396700 4021 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
NPIPA3F8WFD2 DPEP2-202ENST00000393847 1697 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
NPIPA3F8WFD2 MICAL1-201ENST00000358577 3142 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
NPIPA3F8WFD2 OR2V1-202ENST00000641318 2665 ntAPPRIS P1 BASIC12.64□□□□□ -0.39
NPIPA3F8WFD2 CPSF7-201ENST00000340437 3695 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
NPIPA3F8WFD2 ACER2-201ENST00000340967 2238 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
NPIPA3F8WFD2 THBS4-201ENST00000350881 3222 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
NPIPA3F8WFD2 PIGG-202ENST00000383028 2787 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
NPIPA3F8WFD2 ZNF717-204ENST00000478296 3875 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
NPIPA3F8WFD2 TSPAN3-205ENST00000558745 1340 ntTSL 5 BASIC12.63□□□□□ -0.39
NPIPA3F8WFD2 IMPDH1-204ENST00000419067 2431 ntTSL 3 BASIC12.63□□□□□ -0.39
NPIPA3F8WFD2 ABR-202ENST00000302538 5289 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
NPIPA3F8WFD2 RMDN1-201ENST00000406452 3063 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
NPIPA3F8WFD2 LRRC17-202ENST00000339431 1963 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
NPIPA3F8WFD2 GIT2-201ENST00000320063 2094 ntTSL 5 BASIC12.63□□□□□ -0.39
NPIPA3F8WFD2 TAF5-201ENST00000369839 3268 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
NPIPA3F8WFD2 ARHGEF33-202ENST00000409978 4484 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
NPIPA3F8WFD2 NIT1-204ENST00000392190 1518 ntAPPRIS ALT1 TSL 3 BASIC12.63□□□□□ -0.39
NPIPA3F8WFD2 AC021305.1-201ENST00000520656 1514 ntBASIC12.63□□□□□ -0.39
NPIPA3F8WFD2 NLRC3-202ENST00000359128 6401 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
NPIPA3F8WFD2 LANCL1-205ENST00000443314 4781 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
NPIPA3F8WFD2 RGS12-204ENST00000382788 5512 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
NPIPA3F8WFD2 ODCP-201ENST00000459650 1639 ntBASIC12.63□□□□□ -0.39
NPIPA3F8WFD2 CACNA1C-214ENST00000399634 7590 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
NPIPA3F8WFD2 CACNA1C-222ENST00000406454 7590 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
NPIPA3F8WFD2 RAD17-207ENST00000361732 3002 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
NPIPA3F8WFD2 MLXIPL-204ENST00000414749 3224 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
NPIPA3F8WFD2 SLC25A31-201ENST00000281154 1841 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
NPIPA3F8WFD2 CSPG4P11-201ENST00000560634 4910 ntBASIC12.63□□□□□ -0.39
NPIPA3F8WFD2 RBPMS-201ENST00000287771 2974 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
NPIPA3F8WFD2 OR2V1-201ENST00000329365 948 ntAPPRIS P1 BASIC12.63□□□□□ -0.39
NPIPA3F8WFD2 C7orf57-201ENST00000348904 2125 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
NPIPA3F8WFD2 BGLAP-201ENST00000368272 732 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
NPIPA3F8WFD2 PPM1N-201ENST00000396735 895 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
NPIPA3F8WFD2 LIF-202ENST00000403987 592 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
NPIPA3F8WFD2 AL357563.1-201ENST00000404728 395 ntBASIC12.63□□□□□ -0.39
NPIPA3F8WFD2 AC112721.1-201ENST00000409162 588 ntTSL 3 BASIC12.63□□□□□ -0.39
NPIPA3F8WFD2 AL627389.1-201ENST00000413508 1182 ntBASIC12.63□□□□□ -0.39
Retrieved 100 of 98,524 protein–RNA pairs in 35.1 ms