Protein–RNA interactions for Protein: Q9P0W2

HMG20B, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1-related, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20BQ9P0W2 LINC01725-203ENST00000417975 3177 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
HMG20BQ9P0W2 APOBEC3D-202ENST00000427494 1961 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
HMG20BQ9P0W2 AC020917.4-201ENST00000623994 1999 ntBASIC16.77■□□□□ 0.27
HMG20BQ9P0W2 HS3ST5-201ENST00000312719 3901 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.27
HMG20BQ9P0W2 ARHGEF10-207ENST00000520359 5472 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
HMG20BQ9P0W2 DAZL-201ENST00000250863 3104 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
HMG20BQ9P0W2 SLC26A1-201ENST00000361661 3660 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
HMG20BQ9P0W2 MEFV-203ENST00000536379 1713 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
HMG20BQ9P0W2 MAGED4B-211ENST00000497164 2482 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
HMG20BQ9P0W2 NFE2L1-218ENST00000583378 2051 ntTSL 5 BASIC16.76■□□□□ 0.27
HMG20BQ9P0W2 FAM219B-201ENST00000357635 3550 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
HMG20BQ9P0W2 PITRM1-206ENST00000451104 3183 ntTSL 2 BASIC16.76■□□□□ 0.27
HMG20BQ9P0W2 ZMYND15-202ENST00000433935 2411 ntAPPRIS P1 TSL 2 BASIC16.76■□□□□ 0.27
HMG20BQ9P0W2 SVOPL-203ENST00000421622 1653 ntTSL 5 BASIC16.76■□□□□ 0.27
HMG20BQ9P0W2 SLC43A3-214ENST00000529554 2207 ntAPPRIS P3 TSL 2 BASIC16.76■□□□□ 0.27
HMG20BQ9P0W2 EPB42-210ENST00000622454 2227 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
HMG20BQ9P0W2 TMEM47-201ENST00000275954 4054 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
HMG20BQ9P0W2 ZNF718-202ENST00000609714 2772 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
HMG20BQ9P0W2 IGHG3-202ENST00000641136 2751 ntAPPRIS P1 BASIC16.76■□□□□ 0.27
HMG20BQ9P0W2 INMT-201ENST00000013222 2559 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
HMG20BQ9P0W2 APP-205ENST00000358918 2366 ntTSL 5 BASIC16.76■□□□□ 0.27
HMG20BQ9P0W2 AGAP12P-201ENST00000585227 2359 ntBASIC16.76■□□□□ 0.27
HMG20BQ9P0W2 COA6-203ENST00000366615 710 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
HMG20BQ9P0W2 SLC50A1-202ENST00000368401 1166 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
HMG20BQ9P0W2 AK1-202ENST00000373156 757 ntAPPRIS P1 TSL 3 BASIC16.76■□□□□ 0.27
HMG20BQ9P0W2 IGLC1-201ENST00000390321 460 ntAPPRIS P1 BASIC16.76■□□□□ 0.27
HMG20BQ9P0W2 ACTBP14-201ENST00000411655 1089 ntBASIC16.76■□□□□ 0.27
HMG20BQ9P0W2 IFI35-203ENST00000415816 1241 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
HMG20BQ9P0W2 AC097065.1-201ENST00000425737 517 ntBASIC16.76■□□□□ 0.27
HMG20BQ9P0W2 IFI35-204ENST00000438323 1232 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
HMG20BQ9P0W2 DLEU2-205ENST00000443587 705 ntTSL 5 BASIC16.76■□□□□ 0.27
HMG20BQ9P0W2 SH3BGR-209ENST00000458295 812 ntTSL 3 BASIC16.76■□□□□ 0.27
HMG20BQ9P0W2 AC107463.1-201ENST00000508605 667 ntTSL 3 BASIC16.76■□□□□ 0.27
HMG20BQ9P0W2 TPP1-209ENST00000528657 578 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
HMG20BQ9P0W2 LINC02369-202ENST00000540745 801 ntTSL 5 BASIC16.76■□□□□ 0.27
HMG20BQ9P0W2 DUXAP9-201ENST00000547220 665 ntTSL 3 BASIC16.76■□□□□ 0.27
HMG20BQ9P0W2 FOXN3-AS2-201ENST00000554071 1262 ntBASIC16.76■□□□□ 0.27
HMG20BQ9P0W2 MT2A-202ENST00000561491 581 ntTSL 2 BASIC16.76■□□□□ 0.27
HMG20BQ9P0W2 AC074050.2-201ENST00000563338 538 ntTSL 3 BASIC16.76■□□□□ 0.27
HMG20BQ9P0W2 AC090617.4-201ENST00000572404 422 ntTSL 3 BASIC16.76■□□□□ 0.27
HMG20BQ9P0W2 SNHG15-205ENST00000580458 710 ntTSL 2 BASIC16.76■□□□□ 0.27
HMG20BQ9P0W2 Metazoa_SRP.144-201ENST00000617007 311 ntBASIC16.76■□□□□ 0.27
HMG20BQ9P0W2 NOP16-211ENST00000621444 954 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
HMG20BQ9P0W2 AC011471.3-201ENST00000623576 402 ntBASIC16.76■□□□□ 0.27
HMG20BQ9P0W2 VAMP2-201ENST00000316509 2153 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
HMG20BQ9P0W2 SWAP70-201ENST00000318950 4882 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
HMG20BQ9P0W2 C17orf80-202ENST00000268942 3449 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
HMG20BQ9P0W2 GRIN1-203ENST00000371550 3940 ntTSL 5 BASIC16.76■□□□□ 0.27
HMG20BQ9P0W2 CERCAM-214ENST00000613052 1429 ntTSL 5 BASIC16.76■□□□□ 0.27
HMG20BQ9P0W2 CFAP36-204ENST00000406691 1575 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
HMG20BQ9P0W2 RNF44-201ENST00000274811 4155 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
HMG20BQ9P0W2 ISY1-203ENST00000393295 3842 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
HMG20BQ9P0W2 LPCAT4-209ENST00000617710 1719 ntTSL 5 BASIC16.76■□□□□ 0.27
HMG20BQ9P0W2 PRDM4-201ENST00000228437 4210 ntAPPRIS P1 TSL 2 BASIC16.75■□□□□ 0.27
HMG20BQ9P0W2 CDC45-202ENST00000404724 1693 ntTSL 2 BASIC16.75■□□□□ 0.27
HMG20BQ9P0W2 HOXC4-202ENST00000430889 1666 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
HMG20BQ9P0W2 TMEM182-201ENST00000409173 3198 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
HMG20BQ9P0W2 F2-205ENST00000530231 1849 ntTSL 5 BASIC16.75■□□□□ 0.27
HMG20BQ9P0W2 DDC-214ENST00000622873 1839 ntTSL 3 BASIC16.75■□□□□ 0.27
HMG20BQ9P0W2 TMEM30B-202ENST00000555868 4471 ntAPPRIS P1 BASIC16.75■□□□□ 0.27
HMG20BQ9P0W2 CNDP2-201ENST00000324262 5130 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
HMG20BQ9P0W2 AL139193.2-201ENST00000553712 1954 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
HMG20BQ9P0W2 TNIK-202ENST00000341852 4727 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
HMG20BQ9P0W2 ITGAM-202ENST00000544665 4718 ntAPPRIS ALT1 TSL 1 (best) BASIC16.75■□□□□ 0.27
HMG20BQ9P0W2 GP6-201ENST00000310373 2268 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
HMG20BQ9P0W2 NIPSNAP3A-201ENST00000374767 1633 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
HMG20BQ9P0W2 CCDC138-203ENST00000412964 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
HMG20BQ9P0W2 ANO6-202ENST00000423947 5504 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
HMG20BQ9P0W2 TPM3P9-201ENST00000424846 2920 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
HMG20BQ9P0W2 ANKHD1-202ENST00000297183 7606 ntTSL 5 BASIC16.75■□□□□ 0.27
HMG20BQ9P0W2 NKX2-1-AS1-201ENST00000521292 1775 ntTSL 2 BASIC16.75■□□□□ 0.27
HMG20BQ9P0W2 PCMTD2-204ENST00000369758 3212 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
HMG20BQ9P0W2 SPATA20-227ENST00000634597 2587 ntAPPRIS ALT1 TSL 5 BASIC16.75■□□□□ 0.27
HMG20BQ9P0W2 AC245140.2-201ENST00000624054 1939 ntBASIC16.75■□□□□ 0.27
HMG20BQ9P0W2 GTF3C6-201ENST00000329970 952 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
HMG20BQ9P0W2 SEPT7-AS1-201ENST00000412856 587 ntTSL 4 BASIC16.75■□□□□ 0.27
HMG20BQ9P0W2 AL355334.1-201ENST00000417713 215 ntBASIC16.75■□□□□ 0.27
HMG20BQ9P0W2 AC147651.3-201ENST00000429872 731 ntTSL 2 BASIC16.75■□□□□ 0.27
HMG20BQ9P0W2 POLR2H-203ENST00000430783 1159 ntTSL 2 BASIC16.75■□□□□ 0.27
HMG20BQ9P0W2 CD44-224ENST00000526669 870 ntTSL 5 BASIC16.75■□□□□ 0.27
HMG20BQ9P0W2 AC020763.1-201ENST00000567186 551 ntTSL 4 BASIC16.75■□□□□ 0.27
HMG20BQ9P0W2 AC005323.2-202ENST00000581304 493 ntTSL 3 BASIC16.75■□□□□ 0.27
HMG20BQ9P0W2 HKR1-220ENST00000591259 734 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
HMG20BQ9P0W2 LIPE-AS1-204ENST00000594624 1448 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
HMG20BQ9P0W2 ANOS1-201ENST00000262648 6314 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
HMG20BQ9P0W2 CFAP43-201ENST00000278064 2963 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
HMG20BQ9P0W2 ADAM17-203ENST00000497134 1873 ntTSL 5 BASIC16.75■□□□□ 0.27
HMG20BQ9P0W2 KIF12-201ENST00000374118 2001 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
HMG20BQ9P0W2 MAGI2-218ENST00000630991 2349 ntTSL 2 BASIC16.75■□□□□ 0.27
HMG20BQ9P0W2 ITGB2-206ENST00000397852 2769 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
HMG20BQ9P0W2 ATP8B3-201ENST00000310127 5095 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
HMG20BQ9P0W2 HSP90AA1-201ENST00000216281 3379 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
HMG20BQ9P0W2 ARHGAP45-201ENST00000313093 4273 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
HMG20BQ9P0W2 AC026904.3-201ENST00000636550 1530 ntTSL 5 BASIC16.75■□□□□ 0.27
HMG20BQ9P0W2 APBB3-202ENST00000356738 1804 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
HMG20BQ9P0W2 PELP1-212ENST00000574876 3465 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
HMG20BQ9P0W2 ARHGEF26-202ENST00000465093 3929 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
HMG20BQ9P0W2 ATXN2L-204ENST00000382686 3739 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
HMG20BQ9P0W2 CLEC20A-202ENST00000623247 1491 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
HMG20BQ9P0W2 SSTR3-201ENST00000610913 4100 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 39.7 ms