Protein–RNA interactions for Protein: Q9C030

TRIM6, Tripartite motif-containing protein 6, humanhuman

Predicted RBP Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM6Q9C030 SGTB-201ENST00000381007 5469 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
TRIM6Q9C030 MCM9-202ENST00000316316 5101 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
TRIM6Q9C030 CYP26B1-201ENST00000001146 4732 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
TRIM6Q9C030 NPRL3-212ENST00000620134 3203 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
TRIM6Q9C030 FIG4-201ENST00000230124 3011 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
TRIM6Q9C030 IGHG3-202ENST00000641136 2751 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
TRIM6Q9C030 SMC6-201ENST00000351948 5173 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
TRIM6Q9C030 AC083964.2-201ENST00000623988 2396 ntBASIC15.29■□□□□ 0.04
TRIM6Q9C030 AL512306.2-201ENST00000444037 2219 ntTSL 2 BASIC15.29■□□□□ 0.04
TRIM6Q9C030 NCOA7-203ENST00000392477 6457 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
TRIM6Q9C030 MPP2-214ENST00000523501 2121 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
TRIM6Q9C030 AC152010.1-201ENST00000415779 2006 ntBASIC15.29■□□□□ 0.04
TRIM6Q9C030 AMT-221ENST00000538581 2038 ntTSL 2 BASIC15.29■□□□□ 0.04
TRIM6Q9C030 GAB1-202ENST00000262995 7981 ntAPPRIS P4 TSL 1 (best) BASIC15.29■□□□□ 0.04
TRIM6Q9C030 TKT-201ENST00000296289 1931 ntTSL 5 BASIC15.29■□□□□ 0.04
TRIM6Q9C030 PRPF8-205ENST00000572621 7445 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
TRIM6Q9C030 FAM219A-209ENST00000445726 3644 ntAPPRIS ALT1 TSL 2 BASIC15.29■□□□□ 0.04
TRIM6Q9C030 AL731571.1-201ENST00000617058 5428 ntBASIC15.29■□□□□ 0.04
TRIM6Q9C030 SPIN3-245ENST00000640768 1722 ntTSL 5 BASIC15.29■□□□□ 0.04
TRIM6Q9C030 NCF4-202ENST00000397147 1641 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
TRIM6Q9C030 ODCP-201ENST00000459650 1639 ntBASIC15.29■□□□□ 0.04
TRIM6Q9C030 ZNF395-201ENST00000344423 4808 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
TRIM6Q9C030 CIITA-213ENST00000618327 4657 ntAPPRIS ALT2 TSL 2 BASIC15.29■□□□□ 0.04
TRIM6Q9C030 RAD23A-209ENST00000592268 1526 ntTSL 5 BASIC15.29■□□□□ 0.04
TRIM6Q9C030 NAA60-202ENST00000407558 2735 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
TRIM6Q9C030 OR2V1-202ENST00000641318 2665 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
TRIM6Q9C030 SIRPA-202ENST00000358771 3996 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
TRIM6Q9C030 ZNF717-204ENST00000478296 3875 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
TRIM6Q9C030 HNRNPA1-201ENST00000330752 1294 ntTSL 5 BASIC15.29■□□□□ 0.04
TRIM6Q9C030 MT1H-201ENST00000332374 397 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
TRIM6Q9C030 BCL2L11-202ENST00000337565 720 ntTSL 5 BASIC15.29■□□□□ 0.04
TRIM6Q9C030 CMTM5-201ENST00000339180 1173 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
TRIM6Q9C030 PFDN6-204ENST00000395131 884 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
TRIM6Q9C030 LY6G6E-227ENST00000409239 776 ntAPPRIS ALT2 TSL 4 BASIC15.29■□□□□ 0.04
TRIM6Q9C030 NSUN5P1-203ENST00000422386 972 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
TRIM6Q9C030 AC012362.1-201ENST00000434906 739 ntBASIC15.29■□□□□ 0.04
TRIM6Q9C030 AC034231.1-201ENST00000507251 537 ntTSL 4 BASIC15.29■□□□□ 0.04
TRIM6Q9C030 AC068867.1-201ENST00000559855 150 ntBASIC15.29■□□□□ 0.04
TRIM6Q9C030 AC007952.4-201ENST00000573866 637 ntBASIC15.29■□□□□ 0.04
TRIM6Q9C030 LINC00244-201ENST00000625073 613 ntBASIC15.29■□□□□ 0.04
TRIM6Q9C030 LINC00475-202ENST00000416438 2506 ntTSL 2 BASIC15.29■□□□□ 0.04
TRIM6Q9C030 LMAN2L-201ENST00000264963 2397 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
TRIM6Q9C030 DCST2-202ENST00000368424 2392 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
TRIM6Q9C030 CAD-202ENST00000403525 6900 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
TRIM6Q9C030 ATL2-210ENST00000452935 2199 ntTSL 2 BASIC15.29■□□□□ 0.04
TRIM6Q9C030 SPATA16-201ENST00000351008 2106 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
TRIM6Q9C030 SHMT2-203ENST00000449049 2121 ntTSL 2 BASIC15.29■□□□□ 0.04
TRIM6Q9C030 USP39-207ENST00000450066 2086 ntTSL 2 BASIC15.29■□□□□ 0.04
TRIM6Q9C030 TRIT1-214ENST00000537440 2026 ntTSL 5 BASIC15.29■□□□□ 0.04
TRIM6Q9C030 PISD-209ENST00000439502 1963 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
TRIM6Q9C030 LRRC41-201ENST00000343304 2947 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
TRIM6Q9C030 ACAN-209ENST00000617301 8669 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
TRIM6Q9C030 AC019109.1-201ENST00000401725 1874 ntBASIC15.29■□□□□ 0.04
TRIM6Q9C030 CLEC16A-202ENST00000409552 3365 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
TRIM6Q9C030 DDX43-201ENST00000370336 2513 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
TRIM6Q9C030 WWTR1-203ENST00000465804 5030 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
TRIM6Q9C030 AL356275.1-201ENST00000638446 7440 ntTSL 5 BASIC15.28■□□□□ 0.04
TRIM6Q9C030 SOX21-AS1-201ENST00000438290 3287 ntTSL 2 BASIC15.28■□□□□ 0.04
TRIM6Q9C030 CLEC18B-204ENST00000617101 2321 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
TRIM6Q9C030 ATG3-202ENST00000402314 3010 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
TRIM6Q9C030 MAPK12-203ENST00000395780 1459 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
TRIM6Q9C030 AC138761.6-201ENST00000583997 1423 ntBASIC15.28■□□□□ 0.04
TRIM6Q9C030 PAX6-264ENST00000640125 1375 ntTSL 5 BASIC15.28■□□□□ 0.04
TRIM6Q9C030 MGLL-201ENST00000265052 4642 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
TRIM6Q9C030 ANKZF1-201ENST00000323348 2579 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
TRIM6Q9C030 RNF167-201ENST00000262482 1915 ntAPPRIS P3 TSL 2 BASIC15.28■□□□□ 0.04
TRIM6Q9C030 OR2V1-201ENST00000329365 948 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
TRIM6Q9C030 C7orf61-201ENST00000332375 1004 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
TRIM6Q9C030 TNNT2-203ENST00000367315 1083 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
TRIM6Q9C030 AL513211.1-201ENST00000429053 483 ntTSL 3 BASIC15.28■□□□□ 0.04
TRIM6Q9C030 AL391415.1-201ENST00000439844 400 ntTSL 3 BASIC15.28■□□□□ 0.04
TRIM6Q9C030 AC068134.1-201ENST00000441266 481 ntTSL 3 BASIC15.28■□□□□ 0.04
TRIM6Q9C030 DMKN-229ENST00000467637 827 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
TRIM6Q9C030 SOCS2-AS1-204ENST00000551626 618 ntTSL 4 BASIC15.28■□□□□ 0.04
TRIM6Q9C030 SNORD3B-1-201ENST00000577988 758 ntBASIC15.28■□□□□ 0.04
TRIM6Q9C030 AP005901.3-201ENST00000581666 415 ntTSL 3 BASIC15.28■□□□□ 0.04
TRIM6Q9C030 SPINT2-204ENST00000587090 1246 ntAPPRIS ALT2 TSL 3 BASIC15.28■□□□□ 0.04
TRIM6Q9C030 AC003043.1-201ENST00000588260 337 ntTSL 3 BASIC15.28■□□□□ 0.04
TRIM6Q9C030 AC011500.3-201ENST00000594676 647 ntTSL 4 BASIC15.28■□□□□ 0.04
TRIM6Q9C030 AC005041.3-201ENST00000606287 649 ntBASIC15.28■□□□□ 0.04
TRIM6Q9C030 ST5-261ENST00000626808 1071 ntTSL 5 BASIC15.28■□□□□ 0.04
TRIM6Q9C030 MTUS1-229ENST00000634613 1193 ntTSL 5 BASIC15.28■□□□□ 0.04
TRIM6Q9C030 C1orf232-202ENST00000635463 466 ntAPPRIS ALT2 TSL 2 BASIC15.28■□□□□ 0.04
TRIM6Q9C030 TRMT1L-201ENST00000367506 4392 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
TRIM6Q9C030 SNX14-203ENST00000369627 3111 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
TRIM6Q9C030 SARS-202ENST00000369923 1882 ntTSL 5 BASIC15.28■□□□□ 0.04
TRIM6Q9C030 TAF8-203ENST00000372982 1805 ntTSL 2 BASIC15.28■□□□□ 0.04
TRIM6Q9C030 AC093797.1-201ENST00000411847 1789 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
TRIM6Q9C030 REV1-202ENST00000393445 4686 ntAPPRIS ALT1 TSL 1 (best) BASIC15.28■□□□□ 0.04
TRIM6Q9C030 TFR2-201ENST00000223051 2888 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
TRIM6Q9C030 YPEL4-201ENST00000300022 1721 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
TRIM6Q9C030 GP6-202ENST00000333884 2210 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
TRIM6Q9C030 SGK2-204ENST00000373100 2225 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
TRIM6Q9C030 AC046130.1-201ENST00000501954 2179 ntTSL 5 BASIC15.28■□□□□ 0.04
TRIM6Q9C030 ZNF23-203ENST00000393539 3242 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
TRIM6Q9C030 SNAP91-215ENST00000521743 4263 ntAPPRIS P2 TSL 5 BASIC15.28■□□□□ 0.04
TRIM6Q9C030 VAC14-AS1-201ENST00000398177 2145 ntTSL 2 BASIC15.28■□□□□ 0.04
TRIM6Q9C030 TMEM104-201ENST00000335464 4745 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
TRIM6Q9C030 TMPO-202ENST00000266732 3615 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
TRIM6Q9C030 SPPL2B-209ENST00000613503 3456 ntAPPRIS P4 TSL 1 (best) BASIC15.27■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 44.8 ms