Protein–RNA interactions for Protein: Q99795

GPA33, Cell surface A33 antigen, humanhuman

Predictions only

Length 319 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GPA33Q99795 NEXN-201ENST00000330010 3195 ntTSL 2 BASIC12.59□□□□□ -0.39
GPA33Q99795 PDZRN3-208ENST00000479530 2778 ntTSL 2 BASIC12.59□□□□□ -0.39
GPA33Q99795 ZNF200-205ENST00000431561 3348 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
GPA33Q99795 ZNF564-201ENST00000339282 2935 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
GPA33Q99795 MAP3K12-203ENST00000547035 2944 ntAPPRIS ALT2 TSL 5 BASIC12.59□□□□□ -0.39
GPA33Q99795 CHMP5-202ENST00000419016 1957 ntTSL 2 BASIC12.59□□□□□ -0.39
GPA33Q99795 STXBP6-202ENST00000396700 4021 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
GPA33Q99795 FAM86C1-202ENST00000359244 2110 ntAPPRIS ALT2 TSL 2 BASIC12.59□□□□□ -0.39
GPA33Q99795 KLHL24-211ENST00000476808 2126 ntTSL 2 BASIC12.59□□□□□ -0.39
GPA33Q99795 TBC1D24-201ENST00000293970 4340 ntAPPRIS ALT1 TSL 1 (best) BASIC12.59□□□□□ -0.39
GPA33Q99795 DNMT3B-202ENST00000328111 4336 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
GPA33Q99795 MIEF2-201ENST00000323019 3364 ntAPPRIS P1 TSL 2 BASIC12.59□□□□□ -0.39
GPA33Q99795 ADRA2B-201ENST00000620793 3371 ntAPPRIS P1 BASIC12.59□□□□□ -0.39
GPA33Q99795 ZCCHC17-204ENST00000546109 1705 ntTSL 2 BASIC12.59□□□□□ -0.39
GPA33Q99795 PLXNB1-204ENST00000456774 5859 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
GPA33Q99795 SH2D3C-201ENST00000314830 3124 ntAPPRIS P4 TSL 1 (best) BASIC12.59□□□□□ -0.39
GPA33Q99795 C1QTNF9-202ENST00000382071 1854 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
GPA33Q99795 KIR3DL1-203ENST00000391728 1871 ntAPPRIS P2 TSL 1 (best) BASIC12.59□□□□□ -0.39
GPA33Q99795 ESRRB-201ENST00000380887 2745 ntTSL 5 BASIC12.59□□□□□ -0.39
GPA33Q99795 KIAA1191-202ENST00000393725 2700 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
GPA33Q99795 PCGF2-202ENST00000611883 2179 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
GPA33Q99795 RNASE7-201ENST00000298690 1498 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
GPA33Q99795 AC004554.1-201ENST00000422830 1468 ntBASIC12.59□□□□□ -0.39
GPA33Q99795 BAIAP3-203ENST00000421665 3875 ntTSL 2 BASIC12.59□□□□□ -0.39
GPA33Q99795 PAX3-205ENST00000392069 3170 ntTSL 5 BASIC12.59□□□□□ -0.39
GPA33Q99795 SUPV3L1-201ENST00000359655 2484 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
GPA33Q99795 SRP72-205ENST00000510663 2473 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
GPA33Q99795 MKL1-203ENST00000402042 4343 ntTSL 1 (best) BASIC12.58□□□□□ -0.39
GPA33Q99795 SUGP2-214ENST00000600377 4752 ntAPPRIS ALT2 TSL 2 BASIC12.58□□□□□ -0.39
GPA33Q99795 CLASP2-218ENST00000487200 1940 ntTSL 2 BASIC12.58□□□□□ -0.39
GPA33Q99795 ALPP-201ENST00000392027 2971 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
GPA33Q99795 IL9RP3-201ENST00000442856 1674 ntBASIC12.58□□□□□ -0.4
GPA33Q99795 EHMT2-202ENST00000375530 3856 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.4
GPA33Q99795 C7orf57-201ENST00000348904 2125 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
GPA33Q99795 DMBX1-201ENST00000360032 2880 ntAPPRIS P2 TSL 1 (best) BASIC12.58□□□□□ -0.4
GPA33Q99795 MYADM-201ENST00000336967 3047 ntAPPRIS P1 TSL 2 BASIC12.58□□□□□ -0.4
GPA33Q99795 TTK-201ENST00000230510 3477 ntAPPRIS ALT2 TSL 2 BASIC12.58□□□□□ -0.4
GPA33Q99795 HIST1H2AH-201ENST00000377459 387 ntAPPRIS P1 BASIC12.58□□□□□ -0.4
GPA33Q99795 AC006987.1-201ENST00000413610 527 ntBASIC12.58□□□□□ -0.4
GPA33Q99795 PLSCR4-204ENST00000446574 1442 ntAPPRIS P1 TSL 2 BASIC12.58□□□□□ -0.4
GPA33Q99795 AL591846.1-201ENST00000451736 433 ntBASIC12.58□□□□□ -0.4
GPA33Q99795 CHIA-209ENST00000483391 1188 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
GPA33Q99795 LYRM9-204ENST00000503642 432 ntTSL 3 BASIC12.58□□□□□ -0.4
GPA33Q99795 ALG1L13P-202ENST00000519320 584 ntBASIC12.58□□□□□ -0.4
GPA33Q99795 LINC02417-201ENST00000542449 515 ntTSL 2 BASIC12.58□□□□□ -0.4
GPA33Q99795 SLC25A29-208ENST00000554912 5169 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
GPA33Q99795 BFAR-203ENST00000562442 1414 ntTSL 2 BASIC12.58□□□□□ -0.4
GPA33Q99795 RPS15A-213ENST00000576436 2190 ntTSL 4 BASIC12.58□□□□□ -0.4
GPA33Q99795 MIR3940-201ENST00000579148 102 ntBASIC12.58□□□□□ -0.4
GPA33Q99795 FBXL12-204ENST00000586469 544 ntTSL 2 BASIC12.58□□□□□ -0.4
GPA33Q99795 AC005695.3-201ENST00000614522 232 ntBASIC12.58□□□□□ -0.4
GPA33Q99795 PCDHB17P-202ENST00000623466 3066 ntBASIC12.58□□□□□ -0.4
GPA33Q99795 POLD1-201ENST00000440232 3444 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
GPA33Q99795 CYTH1-215ENST00000591455 3286 ntAPPRIS P3 TSL 2 BASIC12.58□□□□□ -0.4
GPA33Q99795 APBA2-212ENST00000561069 3138 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
GPA33Q99795 E2F7-201ENST00000322886 5740 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
GPA33Q99795 ZNF571-AS1-203ENST00000586139 2684 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
GPA33Q99795 PRKACB-205ENST00000370688 1905 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
GPA33Q99795 SMPDL3B-206ENST00000549094 1611 ntTSL 5 BASIC12.58□□□□□ -0.4
GPA33Q99795 APBB3-205ENST00000412920 1455 ntAPPRIS ALT1 TSL 1 (best) BASIC12.58□□□□□ -0.4
GPA33Q99795 TRPM1-203ENST00000542188 6004 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
GPA33Q99795 MTMR9-202ENST00000526292 1960 ntTSL 2 BASIC12.58□□□□□ -0.4
GPA33Q99795 GK-203ENST00000378943 3707 ntAPPRIS ALT1 TSL 1 (best) BASIC12.58□□□□□ -0.4
GPA33Q99795 KCNH4-202ENST00000607371 3723 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
GPA33Q99795 MUC1-225ENST00000612778 1836 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.4
GPA33Q99795 PCDHA11-202ENST00000616325 3418 ntAPPRIS ALT2 BASIC12.58□□□□□ -0.4
GPA33Q99795 BRWD1-201ENST00000333229 10141 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
GPA33Q99795 DNAJB8-201ENST00000319153 2465 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
GPA33Q99795 RNF216-202ENST00000389902 3293 ntAPPRIS P4 TSL 1 (best) BASIC12.57□□□□□ -0.4
GPA33Q99795 CC2D1A-208ENST00000589606 3117 ntAPPRIS ALT1 TSL 1 (best) BASIC12.57□□□□□ -0.4
GPA33Q99795 AL133338.1-201ENST00000565695 1517 ntBASIC12.57□□□□□ -0.4
GPA33Q99795 PNPLA6-201ENST00000221249 4617 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
GPA33Q99795 ZBED8-201ENST00000408953 2851 ntAPPRIS P1 TSL 2 BASIC12.57□□□□□ -0.4
GPA33Q99795 AC008764.8-201ENST00000623966 2717 ntBASIC12.57□□□□□ -0.4
GPA33Q99795 SNX25-201ENST00000264694 3264 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
GPA33Q99795 AMDHD2-202ENST00000302956 3273 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
GPA33Q99795 VPS25-201ENST00000253794 1101 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
GPA33Q99795 CCDC88B-201ENST00000301897 870 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
GPA33Q99795 ZNF138-201ENST00000307355 1141 ntAPPRIS ALT2 TSL 4 BASIC12.57□□□□□ -0.4
GPA33Q99795 SH3BGRL3-202ENST00000319041 768 ntTSL 2 BASIC12.57□□□□□ -0.4
GPA33Q99795 PGGHG-204ENST00000409655 2963 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
GPA33Q99795 AC005722.1-201ENST00000431878 964 ntBASIC12.57□□□□□ -0.4
GPA33Q99795 AC018685.1-201ENST00000457813 368 ntTSL 3 BASIC12.57□□□□□ -0.4
GPA33Q99795 DSCR3-207ENST00000476950 937 ntTSL 2 BASIC12.57□□□□□ -0.4
GPA33Q99795 HOXB-AS3-209ENST00000477144 743 ntTSL 5 BASIC12.57□□□□□ -0.4
GPA33Q99795 AC233724.6-201ENST00000503184 1088 ntAPPRIS P1 BASIC12.57□□□□□ -0.4
GPA33Q99795 CCNC-217ENST00000523985 958 ntTSL 2 BASIC12.57□□□□□ -0.4
GPA33Q99795 AC084859.1-201ENST00000533002 670 ntTSL 4 BASIC12.57□□□□□ -0.4
GPA33Q99795 AC104982.3-201ENST00000581995 514 ntBASIC12.57□□□□□ -0.4
GPA33Q99795 STPG3-204ENST00000611378 1015 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
GPA33Q99795 AC091271.1-201ENST00000611877 1162 ntBASIC12.57□□□□□ -0.4
GPA33Q99795 MIR6869-201ENST00000619434 62 ntBASIC12.57□□□□□ -0.4
GPA33Q99795 LINC00987-201ENST00000427111 2472 ntTSL 2 BASIC12.57□□□□□ -0.4
GPA33Q99795 NUDT16-202ENST00000521288 6108 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
GPA33Q99795 FUT8-202ENST00000358307 2664 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
GPA33Q99795 IL19-201ENST00000270218 1473 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
GPA33Q99795 BISPR-204ENST00000634675 1806 ntTSL 2 BASIC12.57□□□□□ -0.4
GPA33Q99795 ATXN7-201ENST00000295900 7224 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
GPA33Q99795 COPS7B-201ENST00000350033 2544 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
GPA33Q99795 SNX12-202ENST00000374274 2376 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
Retrieved 100 of 98,524 protein–RNA pairs in 52.4 ms