Protein–RNA interactions for Protein: Q96PV0

SYNGAP1, Ras/Rap GTPase-activating protein SynGAP, humanhuman

Predictions only

Length 1,343 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1Q96PV0 WIZ-203ENST00000545156 4466 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
SYNGAP1Q96PV0 ANO10-203ENST00000396091 2419 ntTSL 2 BASIC15.65■□□□□ 0.1
SYNGAP1Q96PV0 KIFC3-207ENST00000543930 3018 ntTSL 2 BASIC15.65■□□□□ 0.1
SYNGAP1Q96PV0 DDC-204ENST00000426377 1700 ntTSL 3 BASIC15.65■□□□□ 0.1
SYNGAP1Q96PV0 MECP2-217ENST00000628176 1712 ntTSL 3 BASIC15.65■□□□□ 0.1
SYNGAP1Q96PV0 CDCA3-207ENST00000538862 1943 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
SYNGAP1Q96PV0 NUP98-203ENST00000359171 7023 ntTSL 5 BASIC15.65■□□□□ 0.1
SYNGAP1Q96PV0 HIST1H1D-201ENST00000244534 666 ntAPPRIS P1 BASIC15.65■□□□□ 0.1
SYNGAP1Q96PV0 KCNK9-201ENST00000303015 1245 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
SYNGAP1Q96PV0 EIF3F-201ENST00000309828 1254 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
SYNGAP1Q96PV0 MRPS11-202ENST00000353598 766 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
SYNGAP1Q96PV0 SKOR2-201ENST00000400404 891 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
SYNGAP1Q96PV0 OST4-201ENST00000429985 559 ntAPPRIS P1 TSL 2 BASIC15.65■□□□□ 0.1
SYNGAP1Q96PV0 AC079250.1-201ENST00000456046 531 ntBASIC15.65■□□□□ 0.1
SYNGAP1Q96PV0 TBC1D3P6-201ENST00000505954 962 ntBASIC15.65■□□□□ 0.1
SYNGAP1Q96PV0 AC109479.3-201ENST00000520163 360 ntTSL 3 BASIC15.65■□□□□ 0.1
SYNGAP1Q96PV0 RMDN1-218ENST00000523911 950 ntTSL 2 BASIC15.65■□□□□ 0.1
SYNGAP1Q96PV0 SCAMP5-216ENST00000568081 710 ntTSL 2 BASIC15.65■□□□□ 0.1
SYNGAP1Q96PV0 STAG3L1-204ENST00000619870 1192 ntTSL 2 BASIC15.65■□□□□ 0.1
SYNGAP1Q96PV0 CHRNA1-203ENST00000409219 1466 ntTSL 3 BASIC15.65■□□□□ 0.1
SYNGAP1Q96PV0 SLC38A9-202ENST00000396865 2927 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
SYNGAP1Q96PV0 CHEK2-201ENST00000328354 1867 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
SYNGAP1Q96PV0 TBC1D24-207ENST00000627285 4382 ntAPPRIS P3 TSL 5 BASIC15.65■□□□□ 0.1
SYNGAP1Q96PV0 RERG-201ENST00000256953 2264 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.1
SYNGAP1Q96PV0 EZH2-202ENST00000350995 2477 ntAPPRIS ALT1 TSL 1 (best) BASIC15.64■□□□□ 0.1
SYNGAP1Q96PV0 TOP3B-201ENST00000357179 2863 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
SYNGAP1Q96PV0 GPAT2-202ENST00000434632 3061 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
SYNGAP1Q96PV0 MLXIPL-201ENST00000313375 3278 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
SYNGAP1Q96PV0 MLXIPL-206ENST00000434326 3252 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
SYNGAP1Q96PV0 HMGCS2-201ENST00000369406 2428 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
SYNGAP1Q96PV0 TFDP1-201ENST00000375370 2648 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
SYNGAP1Q96PV0 MAP2K1-201ENST00000307102 3410 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
SYNGAP1Q96PV0 DDX20-201ENST00000369702 4212 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
SYNGAP1Q96PV0 TJP2-208ENST00000535702 3984 ntAPPRIS ALT2 TSL 2 BASIC15.64■□□□□ 0.09
SYNGAP1Q96PV0 MLXIPL-205ENST00000429400 3173 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
SYNGAP1Q96PV0 SPECC1-202ENST00000395522 2982 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
SYNGAP1Q96PV0 SUOX-201ENST00000266971 2364 ntAPPRIS P1 TSL 2 BASIC15.64■□□□□ 0.09
SYNGAP1Q96PV0 AL117190.1-201ENST00000637474 1985 ntTSL 5 BASIC15.64■□□□□ 0.09
SYNGAP1Q96PV0 KIF3C-201ENST00000264712 5344 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
SYNGAP1Q96PV0 HEXA-206ENST00000566304 1795 ntTSL 2 BASIC15.64■□□□□ 0.09
SYNGAP1Q96PV0 SLC4A7-210ENST00000440156 4120 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
SYNGAP1Q96PV0 SPAG9-222ENST00000618113 8246 ntAPPRIS ALT1 TSL 5 BASIC15.64■□□□□ 0.09
SYNGAP1Q96PV0 AGFG1-204ENST00000409315 2912 ntTSL 5 BASIC15.64■□□□□ 0.09
SYNGAP1Q96PV0 GLIPR1L2-201ENST00000320460 1729 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
SYNGAP1Q96PV0 MEFV-203ENST00000536379 1713 ntAPPRIS ALT2 TSL 5 BASIC15.64■□□□□ 0.09
SYNGAP1Q96PV0 ART3-201ENST00000341029 1517 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
SYNGAP1Q96PV0 C17orf53-201ENST00000245382 2272 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
SYNGAP1Q96PV0 KLK4-201ENST00000324041 1347 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
SYNGAP1Q96PV0 AC007491.1-201ENST00000637560 1306 ntTSL 5 BASIC15.64■□□□□ 0.09
SYNGAP1Q96PV0 CPPED1-201ENST00000261660 1898 ntTSL 2 BASIC15.64■□□□□ 0.09
SYNGAP1Q96PV0 CHRNB4-201ENST00000261751 2623 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
SYNGAP1Q96PV0 APBB3-202ENST00000356738 1804 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
SYNGAP1Q96PV0 ZNF614-202ENST00000356322 1293 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
SYNGAP1Q96PV0 TMEM95-202ENST00000389982 1191 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
SYNGAP1Q96PV0 AL359853.1-202ENST00000415218 544 ntTSL 2 BASIC15.64■□□□□ 0.09
SYNGAP1Q96PV0 GNAT1-202ENST00000433068 1224 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
SYNGAP1Q96PV0 GOLGA6L16P-201ENST00000441780 1299 ntBASIC15.64■□□□□ 0.09
SYNGAP1Q96PV0 AL445471.1-201ENST00000456316 820 ntTSL 5 BASIC15.64■□□□□ 0.09
SYNGAP1Q96PV0 NAA38-205ENST00000575771 852 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
SYNGAP1Q96PV0 SEPT14P19-201ENST00000587432 336 ntTSL 2 BASIC15.64■□□□□ 0.09
SYNGAP1Q96PV0 AC113385.2-201ENST00000614465 762 ntBASIC15.64■□□□□ 0.09
SYNGAP1Q96PV0 IDH3A-224ENST00000629769 114 ntTSL 5 BASIC15.64■□□□□ 0.09
SYNGAP1Q96PV0 EIF3F-209ENST00000640290 372 ntTSL 5 BASIC15.64■□□□□ 0.09
SYNGAP1Q96PV0 ENDOV-206ENST00000518901 2549 ntTSL 2 BASIC15.64■□□□□ 0.09
SYNGAP1Q96PV0 PRICKLE1-201ENST00000345127 5902 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
SYNGAP1Q96PV0 TDRD12-202ENST00000444215 3934 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
SYNGAP1Q96PV0 ARID3B-201ENST00000346246 4271 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
SYNGAP1Q96PV0 ALDOA-202ENST00000395240 1447 ntAPPRIS ALT1 TSL 5 BASIC15.64■□□□□ 0.09
SYNGAP1Q96PV0 GAK-214ENST00000511163 4280 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
SYNGAP1Q96PV0 TMEM9B-202ENST00000525069 1433 ntTSL 2 BASIC15.64■□□□□ 0.09
SYNGAP1Q96PV0 AC062028.1-201ENST00000536743 1422 ntTSL 5 BASIC15.64■□□□□ 0.09
SYNGAP1Q96PV0 XPNPEP1-201ENST00000322238 2467 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
SYNGAP1Q96PV0 CCDC186-202ENST00000369286 1928 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
SYNGAP1Q96PV0 SAR1A-204ENST00000373241 2996 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
SYNGAP1Q96PV0 INF2-203ENST00000392634 4672 ntAPPRIS P3 TSL 5 BASIC15.63■□□□□ 0.09
SYNGAP1Q96PV0 RPF1-201ENST00000370654 1385 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
SYNGAP1Q96PV0 GRHL1-202ENST00000405379 1881 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
SYNGAP1Q96PV0 SELENBP1-208ENST00000447402 1530 ntTSL 2 BASIC15.63■□□□□ 0.09
SYNGAP1Q96PV0 AC003986.1-201ENST00000452700 1526 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
SYNGAP1Q96PV0 GOPC-201ENST00000052569 4590 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
SYNGAP1Q96PV0 DDN-201ENST00000421952 3749 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
SYNGAP1Q96PV0 GPRASP1-205ENST00000537097 5980 ntAPPRIS P1 TSL 2 BASIC15.63■□□□□ 0.09
SYNGAP1Q96PV0 CDH16-209ENST00000570262 2604 ntTSL 5 BASIC15.63■□□□□ 0.09
SYNGAP1Q96PV0 MSMO1-201ENST00000261507 2269 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
SYNGAP1Q96PV0 ELOA2-202ENST00000620522 1641 ntAPPRIS ALT2 TSL 5 BASIC15.63■□□□□ 0.09
SYNGAP1Q96PV0 Z98885.3-201ENST00000624882 1757 ntBASIC15.63■□□□□ 0.09
SYNGAP1Q96PV0 PCDHA5-201ENST00000529619 4157 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
SYNGAP1Q96PV0 CFAP52-202ENST00000396219 1912 ntTSL 2 BASIC15.63■□□□□ 0.09
SYNGAP1Q96PV0 VPS9D1-201ENST00000389386 2748 ntAPPRIS P2 TSL 1 (best) BASIC15.63■□□□□ 0.09
SYNGAP1Q96PV0 KRTAP4-12-201ENST00000394014 1077 ntAPPRIS P1 BASIC15.63■□□□□ 0.09
SYNGAP1Q96PV0 AL121983.2-202ENST00000419983 535 ntTSL 3 BASIC15.63■□□□□ 0.09
SYNGAP1Q96PV0 AC104961.1-201ENST00000427605 771 ntBASIC15.63■□□□□ 0.09
SYNGAP1Q96PV0 BX248123.1-201ENST00000429070 606 ntTSL 3 BASIC15.63■□□□□ 0.09
SYNGAP1Q96PV0 MED19-202ENST00000431606 1203 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
SYNGAP1Q96PV0 AL365500.1-201ENST00000442783 868 ntTSL 3 BASIC15.63■□□□□ 0.09
SYNGAP1Q96PV0 AC092896.1-201ENST00000465850 380 ntBASIC15.63■□□□□ 0.09
SYNGAP1Q96PV0 C9orf135-205ENST00000527647 748 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
SYNGAP1Q96PV0 AC078814.4-201ENST00000546650 327 ntBASIC15.63■□□□□ 0.09
SYNGAP1Q96PV0 MIR5001-201ENST00000580185 100 ntBASIC15.63■□□□□ 0.09
SYNGAP1Q96PV0 ZFP36-201ENST00000594045 690 ntTSL 3 BASIC15.63■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 113.4 ms