Protein–RNA interactions for Protein: Q8IUD6

RNF135, E3 ubiquitin-protein ligase RNF135, humanhuman

Predictions only

Length 432 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF135Q8IUD6 AL135936.1-201ENST00000617956 998 ntTSL 5 BASIC14.73□□□□□ -0.05
RNF135Q8IUD6 OSMR-AS1-204ENST00000636516 850 ntTSL 5 BASIC14.73□□□□□ -0.05
RNF135Q8IUD6 TYK2-210ENST00000529370 3176 ntTSL 2 BASIC14.73□□□□□ -0.05
RNF135Q8IUD6 CMBL-201ENST00000296658 2335 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
RNF135Q8IUD6 AFAP1L1-205ENST00000515000 2319 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
RNF135Q8IUD6 SARS2-202ENST00000430193 1886 ntAPPRIS ALT2 TSL 5 BASIC14.73□□□□□ -0.05
RNF135Q8IUD6 LAP3-210ENST00000606142 1876 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
RNF135Q8IUD6 AIPL1-207ENST00000574506 2074 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
RNF135Q8IUD6 EFR3B-202ENST00000401432 5162 ntTSL 2 BASIC14.73□□□□□ -0.05
RNF135Q8IUD6 SLC11A2-204ENST00000541174 2470 ntAPPRIS P3 TSL 1 (best) BASIC14.73□□□□□ -0.05
RNF135Q8IUD6 MED14-201ENST00000324817 7984 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
RNF135Q8IUD6 SLC26A8-201ENST00000355574 3463 ntAPPRIS P1 TSL 2 BASIC14.73□□□□□ -0.05
RNF135Q8IUD6 PELP1-212ENST00000574876 3465 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
RNF135Q8IUD6 OAS3-201ENST00000228928 6719 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
RNF135Q8IUD6 MRM2-201ENST00000242257 1601 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
RNF135Q8IUD6 EIF4E2-201ENST00000258416 1604 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
RNF135Q8IUD6 SPATS2-203ENST00000547865 1810 ntTSL 2 BASIC14.73□□□□□ -0.05
RNF135Q8IUD6 GNPNAT1-203ENST00000554230 2238 ntTSL 5 BASIC14.73□□□□□ -0.05
RNF135Q8IUD6 TIGD1-201ENST00000408957 2625 ntAPPRIS P1 BASIC14.73□□□□□ -0.05
RNF135Q8IUD6 CICP16-201ENST00000502609 2813 ntBASIC14.73□□□□□ -0.05
RNF135Q8IUD6 WNT7A-201ENST00000285018 4041 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
RNF135Q8IUD6 SELENON-201ENST00000354177 4227 ntAPPRIS ALT2 TSL 5 BASIC14.73□□□□□ -0.05
RNF135Q8IUD6 FBN3-205ENST00000600128 9362 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
RNF135Q8IUD6 FGD6-203ENST00000546711 4568 ntTSL 5 BASIC14.73□□□□□ -0.05
RNF135Q8IUD6 PAWR-201ENST00000328827 9129 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
RNF135Q8IUD6 CCDC88A-201ENST00000263630 9667 ntAPPRIS P3 TSL 1 (best) BASIC14.73□□□□□ -0.05
RNF135Q8IUD6 TMEM9-203ENST00000367333 1564 ntAPPRIS P3 TSL 1 (best) BASIC14.73□□□□□ -0.05
RNF135Q8IUD6 NECTIN1-203ENST00000341398 1377 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
RNF135Q8IUD6 MSANTD2P1-201ENST00000445341 1368 ntBASIC14.73□□□□□ -0.05
RNF135Q8IUD6 CARMIL2-202ENST00000545661 4119 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
RNF135Q8IUD6 ASGR1-209ENST00000619926 1384 ntTSL 5 BASIC14.73□□□□□ -0.05
RNF135Q8IUD6 TFCP2-201ENST00000257915 3546 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
RNF135Q8IUD6 TMEM87B-201ENST00000283206 5212 ntAPPRIS P1 TSL 2 BASIC14.72□□□□□ -0.05
RNF135Q8IUD6 DNAJC27-207ENST00000534855 4831 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
RNF135Q8IUD6 OR2C3-201ENST00000366487 8467 ntAPPRIS P1 BASIC14.72□□□□□ -0.05
RNF135Q8IUD6 PSME4-202ENST00000404125 7099 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
RNF135Q8IUD6 KLHL9-201ENST00000359039 5710 ntAPPRIS P1 BASIC14.72□□□□□ -0.05
RNF135Q8IUD6 OXSM-201ENST00000280701 1519 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
RNF135Q8IUD6 SMTN-223ENST00000619644 3227 ntTSL 2 BASIC14.72□□□□□ -0.05
RNF135Q8IUD6 SC5D-202ENST00000392789 2258 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
RNF135Q8IUD6 PRMT2-216ENST00000621201 1301 ntTSL 5 BASIC14.72□□□□□ -0.05
RNF135Q8IUD6 HBP1-201ENST00000222574 2829 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
RNF135Q8IUD6 GIT1-211ENST00000581348 2827 ntAPPRIS ALT2 TSL 2 BASIC14.72□□□□□ -0.05
RNF135Q8IUD6 ERG-207ENST00000398919 1868 ntAPPRIS ALT1 TSL 1 (best) BASIC14.72□□□□□ -0.05
RNF135Q8IUD6 PSG4-203ENST00000433626 1887 ntTSL 2 BASIC14.72□□□□□ -0.05
RNF135Q8IUD6 AL356275.1-201ENST00000638446 7440 ntTSL 5 BASIC14.72□□□□□ -0.05
RNF135Q8IUD6 PSMC1-201ENST00000261303 4448 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
RNF135Q8IUD6 ARHGEF37-201ENST00000333677 4968 ntAPPRIS P1 TSL 2 BASIC14.72□□□□□ -0.05
RNF135Q8IUD6 PGLYRP3-201ENST00000290722 1173 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
RNF135Q8IUD6 C18orf21-202ENST00000333234 958 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
RNF135Q8IUD6 ATP5H-202ENST00000344546 553 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
RNF135Q8IUD6 GALP-201ENST00000357330 938 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
RNF135Q8IUD6 CD300LG-203ENST00000377203 1060 ntAPPRIS ALT2 TSL 2 BASIC14.72□□□□□ -0.05
RNF135Q8IUD6 AC104961.1-201ENST00000427605 771 ntBASIC14.72□□□□□ -0.05
RNF135Q8IUD6 GAS5-209ENST00000430245 723 ntTSL 3 BASIC14.72□□□□□ -0.05
RNF135Q8IUD6 UBE3A-204ENST00000438097 8939 ntAPPRIS P3 TSL 5 BASIC14.72□□□□□ -0.05
RNF135Q8IUD6 GALP-202ENST00000440823 889 ntTSL 5 BASIC14.72□□□□□ -0.05
RNF135Q8IUD6 TIMP1-205ENST00000456754 1095 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
RNF135Q8IUD6 LINC02435-201ENST00000508291 584 ntTSL 3 BASIC14.72□□□□□ -0.05
RNF135Q8IUD6 IKBKB-223ENST00000522147 954 ntTSL 5 BASIC14.72□□□□□ -0.05
RNF135Q8IUD6 C11orf1-202ENST00000528125 534 ntTSL 2 BASIC14.72□□□□□ -0.05
RNF135Q8IUD6 URB1-AS1-201ENST00000534991 831 ntBASIC14.72□□□□□ -0.05
RNF135Q8IUD6 CR383656.13-201ENST00000550928 563 ntTSL 3 BASIC14.72□□□□□ -0.05
RNF135Q8IUD6 AL512310.10-201ENST00000555580 563 ntTSL 3 BASIC14.72□□□□□ -0.05
RNF135Q8IUD6 IFI27L1-212ENST00000557218 413 ntTSL 3 BASIC14.72□□□□□ -0.05
RNF135Q8IUD6 USP3-AS1-204ENST00000559861 620 ntTSL 5 BASIC14.72□□□□□ -0.05
RNF135Q8IUD6 AC145285.5-201ENST00000562217 361 ntBASIC14.72□□□□□ -0.05
RNF135Q8IUD6 AC009163.5-202ENST00000571737 466 ntTSL 3 BASIC14.72□□□□□ -0.05
RNF135Q8IUD6 AC011489.1-201ENST00000586744 690 ntTSL 3 BASIC14.72□□□□□ -0.05
RNF135Q8IUD6 COL4A1-201ENST00000375820 6532 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
RNF135Q8IUD6 SFXN3-201ENST00000224807 3089 ntTSL 5 BASIC14.72□□□□□ -0.05
RNF135Q8IUD6 PTPN23-201ENST00000265562 5244 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
RNF135Q8IUD6 MFAP3-201ENST00000322602 2891 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
RNF135Q8IUD6 PIGT-203ENST00000372689 1971 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
RNF135Q8IUD6 CTNND2-202ENST00000458100 1962 ntTSL 5 BASIC14.72□□□□□ -0.05
RNF135Q8IUD6 MTCL1-202ENST00000359865 6093 ntAPPRIS P2 TSL 2 BASIC14.72□□□□□ -0.05
RNF135Q8IUD6 FCRL6-202ENST00000339348 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
RNF135Q8IUD6 SCUBE2-201ENST00000309263 3727 ntTSL 5 BASIC14.72□□□□□ -0.05
RNF135Q8IUD6 ANGPTL2-202ENST00000373425 3707 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
RNF135Q8IUD6 XPNPEP1-201ENST00000322238 2467 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
RNF135Q8IUD6 WDR27-201ENST00000423258 2465 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
RNF135Q8IUD6 CORO7-222ENST00000574025 2826 ntTSL 2 BASIC14.72□□□□□ -0.05
RNF135Q8IUD6 ZNF174-201ENST00000268655 2260 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
RNF135Q8IUD6 LDB3-204ENST00000372066 1598 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
RNF135Q8IUD6 PRICKLE3-204ENST00000453382 1937 ntAPPRIS ALT2 TSL 5 BASIC14.72□□□□□ -0.05
RNF135Q8IUD6 ALDH1A3-202ENST00000346623 3104 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
RNF135Q8IUD6 MAPK4-206ENST00000592595 4330 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
RNF135Q8IUD6 JPH3-201ENST00000284262 3985 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
RNF135Q8IUD6 LRRC8D-201ENST00000337338 3950 ntAPPRIS P1 TSL 2 BASIC14.72□□□□□ -0.05
RNF135Q8IUD6 NTN4-201ENST00000343702 3615 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
RNF135Q8IUD6 OCRL-202ENST00000371113 5162 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
RNF135Q8IUD6 CFAP46-202ENST00000368586 8278 ntAPPRIS P2 TSL 5 BASIC14.72□□□□□ -0.05
RNF135Q8IUD6 DUSP18-204ENST00000403268 2920 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
RNF135Q8IUD6 PDPR-202ENST00000398122 2734 ntTSL 2 BASIC14.72□□□□□ -0.05
RNF135Q8IUD6 PDE4A-209ENST00000592685 2707 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
RNF135Q8IUD6 ZKSCAN4-201ENST00000377294 2375 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
RNF135Q8IUD6 ENDOV-206ENST00000518901 2549 ntTSL 2 BASIC14.71□□□□□ -0.05
RNF135Q8IUD6 SHROOM1-203ENST00000378679 4019 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
RNF135Q8IUD6 ETNPPL-206ENST00000510706 1692 ntTSL 2 BASIC14.71□□□□□ -0.05
RNF135Q8IUD6 PTPRO-201ENST00000281171 5301 ntAPPRIS P3 TSL 1 (best) BASIC14.71□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 58 ms