Protein–RNA interactions for Protein: Q5VT25

CDC42BPA, Serine/threonine-protein kinase MRCK alpha, humanhuman

Predictions only

Length 1,732 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPAQ5VT25 CDC20P1-201ENST00000488829 1500 ntBASIC20.03■□□□□ 0.8
CDC42BPAQ5VT25 MVK-207ENST00000539575 2747 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CDC42BPAQ5VT25 CNOT6-202ENST00000393356 6303 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CDC42BPAQ5VT25 ERGIC3-202ENST00000348547 1359 ntAPPRIS ALT1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CDC42BPAQ5VT25 LINC01114-203ENST00000425879 2434 ntTSL 2 BASIC20.03■□□□□ 0.8
CDC42BPAQ5VT25 AC007686.3-201ENST00000619017 3487 ntBASIC20.03■□□□□ 0.8
CDC42BPAQ5VT25 MTMR1-208ENST00000445323 4516 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
CDC42BPAQ5VT25 HIF3A-202ENST00000244303 2250 ntTSL 2 BASIC20.03■□□□□ 0.8
CDC42BPAQ5VT25 SAFB2-201ENST00000252542 3371 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CDC42BPAQ5VT25 NUMBL-201ENST00000252891 3561 ntAPPRIS P3 TSL 1 (best) BASIC20.03■□□□□ 0.8
CDC42BPAQ5VT25 SLC26A11-201ENST00000361193 2885 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CDC42BPAQ5VT25 LINC01833-204ENST00000444871 581 ntTSL 3 BASIC20.03■□□□□ 0.8
CDC42BPAQ5VT25 TMA16-204ENST00000508268 608 ntTSL 2 BASIC20.03■□□□□ 0.8
CDC42BPAQ5VT25 NEMF-210ENST00000556672 590 ntTSL 2 BASIC20.03■□□□□ 0.8
CDC42BPAQ5VT25 TTC39A-AS1-201ENST00000564479 812 ntTSL 3 BASIC20.03■□□□□ 0.8
CDC42BPAQ5VT25 SOX2-OT-228ENST00000597828 864 ntTSL 5 BASIC20.03■□□□□ 0.8
CDC42BPAQ5VT25 ZNF677-207ENST00000598806 701 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
CDC42BPAQ5VT25 SMG9-211ENST00000601170 2387 ntTSL 2 BASIC20.03■□□□□ 0.8
CDC42BPAQ5VT25 NTRK3-203ENST00000357724 2980 ntTSL 5 BASIC20.03■□□□□ 0.8
CDC42BPAQ5VT25 CALU-202ENST00000449187 2438 ntAPPRIS ALT1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CDC42BPAQ5VT25 DEGS1-202ENST00000391877 1345 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
CDC42BPAQ5VT25 FOLR1-203ENST00000393679 1331 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CDC42BPAQ5VT25 DNM1-203ENST00000393594 3245 ntAPPRIS ALT1 TSL 2 BASIC20.03■□□□□ 0.8
CDC42BPAQ5VT25 SNX9-201ENST00000392185 4198 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CDC42BPAQ5VT25 A1BG-AS1-203ENST00000594950 1718 ntTSL 2 BASIC20.03■□□□□ 0.8
CDC42BPAQ5VT25 ANXA13-201ENST00000262219 1588 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
CDC42BPAQ5VT25 DRD3-204ENST00000467632 1554 ntAPPRIS P3 TSL 1 (best) BASIC20.03■□□□□ 0.8
CDC42BPAQ5VT25 MITF-204ENST00000352241 4814 ntAPPRIS ALT1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CDC42BPAQ5VT25 LINC00324-201ENST00000315707 2082 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
CDC42BPAQ5VT25 AMPD2-219ENST00000528667 3134 ntAPPRIS P2 TSL 1 (best) BASIC20.02■□□□□ 0.8
CDC42BPAQ5VT25 CYP4F12-201ENST00000324632 1687 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
CDC42BPAQ5VT25 RN7SL452P-201ENST00000482923 291 ntBASIC20.02■□□□□ 0.8
CDC42BPAQ5VT25 AC100788.1-201ENST00000591108 945 ntTSL 5 BASIC20.02■□□□□ 0.8
CDC42BPAQ5VT25 CHSY3-201ENST00000305031 3850 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
CDC42BPAQ5VT25 ZFP69B-201ENST00000361584 2029 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
CDC42BPAQ5VT25 RTN4RL1-201ENST00000331238 3625 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
CDC42BPAQ5VT25 TUBB8-207ENST00000568866 1367 ntTSL 5 BASIC20.02■□□□□ 0.8
CDC42BPAQ5VT25 RBL1-201ENST00000344359 3225 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
CDC42BPAQ5VT25 ZDHHC20-202ENST00000382466 5338 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.8
CDC42BPAQ5VT25 RNF11-201ENST00000242719 3084 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
CDC42BPAQ5VT25 ABAT-213ENST00000567812 1959 ntTSL 2 BASIC20.02■□□□□ 0.79
CDC42BPAQ5VT25 ADRA2A-201ENST00000280155 3745 ntAPPRIS P1 BASIC20.02■□□□□ 0.79
CDC42BPAQ5VT25 EIF2AK4-208ENST00000559624 3548 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
CDC42BPAQ5VT25 NUTM2A-202ENST00000381707 3290 ntAPPRIS P2 TSL 1 (best) BASIC20.02■□□□□ 0.79
CDC42BPAQ5VT25 ADGRA3-202ENST00000334304 4566 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
CDC42BPAQ5VT25 MAP6-202ENST00000434603 4329 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.79
CDC42BPAQ5VT25 CTLA4-201ENST00000295854 525 ntTSL 5 BASIC20.02■□□□□ 0.79
CDC42BPAQ5VT25 TPI1P3-201ENST00000335020 740 ntBASIC20.02■□□□□ 0.79
CDC42BPAQ5VT25 KRBOX4-203ENST00000377919 993 ntAPPRIS ALT2 TSL 3 BASIC20.02■□□□□ 0.79
CDC42BPAQ5VT25 NAA10-205ENST00000393712 908 ntTSL 5 BASIC20.02■□□□□ 0.79
CDC42BPAQ5VT25 AC105446.1-201ENST00000441882 407 ntTSL 3 BASIC20.02■□□□□ 0.79
CDC42BPAQ5VT25 SCOC-209ENST00000512749 841 ntAPPRIS ALT1 TSL 3 BASIC20.02■□□□□ 0.79
CDC42BPAQ5VT25 AL137779.3-201ENST00000553295 729 ntBASIC20.02■□□□□ 0.79
CDC42BPAQ5VT25 GABARAPL2-203ENST00000565057 571 ntTSL 2 BASIC20.02■□□□□ 0.79
CDC42BPAQ5VT25 NAT9-219ENST00000582524 573 ntTSL 4 BASIC20.02■□□□□ 0.79
CDC42BPAQ5VT25 AC091691.1-201ENST00000583587 1018 ntBASIC20.02■□□□□ 0.79
CDC42BPAQ5VT25 AL589743.3-201ENST00000604121 517 ntBASIC20.02■□□□□ 0.79
CDC42BPAQ5VT25 KRT75-201ENST00000252245 2324 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
CDC42BPAQ5VT25 SLC26A8-202ENST00000394602 3144 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
CDC42BPAQ5VT25 AC135782.3-201ENST00000562782 2105 ntBASIC20.01■□□□□ 0.79
CDC42BPAQ5VT25 PXN-201ENST00000228307 3785 ntAPPRIS P4 TSL 1 (best) BASIC20.01■□□□□ 0.79
CDC42BPAQ5VT25 ITGA7-202ENST00000347027 4084 ntAPPRIS ALT2 TSL 5 BASIC20.01■□□□□ 0.79
CDC42BPAQ5VT25 CDC45-201ENST00000263201 1976 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
CDC42BPAQ5VT25 TMEM182-202ENST00000409528 3112 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
CDC42BPAQ5VT25 TRAF3-202ENST00000351691 2239 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
CDC42BPAQ5VT25 ECHDC2-201ENST00000358358 1126 ntTSL 2 BASIC20.01■□□□□ 0.79
CDC42BPAQ5VT25 OBP2A-203ENST00000371776 689 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
CDC42BPAQ5VT25 CDCA4P3-201ENST00000442572 689 ntBASIC20.01■□□□□ 0.79
CDC42BPAQ5VT25 RPL7AP53-201ENST00000468834 793 ntBASIC20.01■□□□□ 0.79
CDC42BPAQ5VT25 LINC01606-208ENST00000521653 557 ntTSL 4 BASIC20.01■□□□□ 0.79
CDC42BPAQ5VT25 ALG10-202ENST00000538927 571 ntTSL 5 BASIC20.01■□□□□ 0.79
CDC42BPAQ5VT25 MLXIPL-203ENST00000354613 3215 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
CDC42BPAQ5VT25 ZNF362-201ENST00000373428 2936 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
CDC42BPAQ5VT25 ABHD13-201ENST00000375898 5338 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
CDC42BPAQ5VT25 PPHLN1-206ENST00000395580 1693 ntAPPRIS P3 TSL 1 (best) BASIC20.01■□□□□ 0.79
CDC42BPAQ5VT25 PLEKHG5-201ENST00000340850 4715 ntAPPRIS P3 TSL 5 BASIC20.01■□□□□ 0.79
CDC42BPAQ5VT25 PLEKHG5-211ENST00000535355 4725 ntAPPRIS ALT2 TSL 2 BASIC20.01■□□□□ 0.79
CDC42BPAQ5VT25 RAF1-205ENST00000442415 3085 ntTSL 5 BASIC20.01■□□□□ 0.79
CDC42BPAQ5VT25 CLASRP-204ENST00000544944 2769 ntAPPRIS ALT2 TSL 2 BASIC20.01■□□□□ 0.79
CDC42BPAQ5VT25 PCDHGC5-202ENST00000610789 2763 ntAPPRIS ALT2 BASIC20.01■□□□□ 0.79
CDC42BPAQ5VT25 DNM1L-220ENST00000549701 2487 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
CDC42BPAQ5VT25 MAN1A1-201ENST00000368468 5014 ntAPPRIS P1 TSL 2 BASIC20.01■□□□□ 0.79
CDC42BPAQ5VT25 TAS1R1-201ENST00000333172 2892 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
CDC42BPAQ5VT25 OPRL1-202ENST00000349451 3369 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
CDC42BPAQ5VT25 PSMA1-201ENST00000396394 1505 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
CDC42BPAQ5VT25 GDAP2-201ENST00000369442 2436 ntTSL 1 (best) BASIC20■□□□□ 0.79
CDC42BPAQ5VT25 NLRX1-204ENST00000409991 3716 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
CDC42BPAQ5VT25 AC008429.1-202ENST00000518818 2067 ntTSL 2 BASIC20■□□□□ 0.79
CDC42BPAQ5VT25 AL022323.5-201ENST00000624101 2059 ntBASIC20■□□□□ 0.79
CDC42BPAQ5VT25 LYRM1-202ENST00000396052 1659 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
CDC42BPAQ5VT25 FAM114A2-215ENST00000522858 3379 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
CDC42BPAQ5VT25 FCRLA-202ENST00000294796 766 ntTSL 1 (best) BASIC20■□□□□ 0.79
CDC42BPAQ5VT25 AP000487.2-201ENST00000324630 394 ntTSL 3 BASIC20■□□□□ 0.79
CDC42BPAQ5VT25 LMO1-201ENST00000335790 1279 ntAPPRIS P3 TSL 1 (best) BASIC20■□□□□ 0.79
CDC42BPAQ5VT25 LMO1-204ENST00000534484 770 ntAPPRIS ALT1 TSL 5 BASIC20■□□□□ 0.79
CDC42BPAQ5VT25 AC009061.2-202ENST00000602596 696 ntTSL 2 BASIC20■□□□□ 0.79
CDC42BPAQ5VT25 SPAG8-201ENST00000340291 1759 ntAPPRIS P3 TSL 1 (best) BASIC20■□□□□ 0.79
CDC42BPAQ5VT25 AKT1S1-205ENST00000391833 3640 ntAPPRIS P1 TSL 2 BASIC20■□□□□ 0.79
CDC42BPAQ5VT25 TP73-207ENST00000378290 1831 ntTSL 2 BASIC20■□□□□ 0.79
CDC42BPAQ5VT25 RUSC1-AS1-202ENST00000446880 1836 ntTSL 2 BASIC20■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 98.4 ms