Protein–RNA interactions for Protein: P37268

FDFT1, Squalene synthase, humanhuman

Predictions only

Length 417 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FDFT1P37268 STRCP1-201ENST00000509801 5328 ntBASIC14.14□□□□□ -0.15
FDFT1P37268 WDR81-205ENST00000437219 3184 ntTSL 2 BASIC14.14□□□□□ -0.15
FDFT1P37268 SF1-202ENST00000334944 3094 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
FDFT1P37268 FCRL1-207ENST00000491942 1554 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
FDFT1P37268 INSC-205ENST00000525218 1576 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
FDFT1P37268 FAM86C1-202ENST00000359244 2110 ntAPPRIS ALT2 TSL 2 BASIC14.14□□□□□ -0.15
FDFT1P37268 FUT8-202ENST00000358307 2664 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
FDFT1P37268 AC105345.1-202ENST00000382488 3204 ntTSL 2 BASIC14.14□□□□□ -0.15
FDFT1P37268 CBLB-204ENST00000405772 3237 ntTSL 2 BASIC14.14□□□□□ -0.15
FDFT1P37268 RAB40A-202ENST00000372633 3126 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
FDFT1P37268 NCAPG-201ENST00000251496 4661 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
FDFT1P37268 NCSTN-201ENST00000294785 2936 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
FDFT1P37268 VIPAS39-208ENST00000556412 1832 ntTSL 2 BASIC14.14□□□□□ -0.15
FDFT1P37268 OR1J1-201ENST00000259357 969 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
FDFT1P37268 CSH1-201ENST00000316193 900 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
FDFT1P37268 C2orf70-201ENST00000329615 731 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
FDFT1P37268 INO80C-202ENST00000334598 974 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
FDFT1P37268 AGTRAP-202ENST00000376627 1055 ntTSL 5 BASIC14.14□□□□□ -0.15
FDFT1P37268 IGHV1-3-201ENST00000390595 395 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
FDFT1P37268 GSTP1-201ENST00000398603 700 ntTSL 3 BASIC14.14□□□□□ -0.15
FDFT1P37268 TUBB2BP1-201ENST00000404155 871 ntBASIC14.14□□□□□ -0.15
FDFT1P37268 BANF1P3-201ENST00000412556 261 ntBASIC14.14□□□□□ -0.15
FDFT1P37268 APOL3-207ENST00000424878 1240 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
FDFT1P37268 AC016700.1-201ENST00000429424 312 ntBASIC14.14□□□□□ -0.15
FDFT1P37268 AC006033.1-201ENST00000440505 426 ntBASIC14.14□□□□□ -0.15
FDFT1P37268 UPK1A-AS1-201ENST00000443196 795 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
FDFT1P37268 FAM162A-202ENST00000469967 1015 ntTSL 2 BASIC14.14□□□□□ -0.15
FDFT1P37268 SNHG12-210ENST00000483436 682 ntTSL 3 BASIC14.14□□□□□ -0.15
FDFT1P37268 AC084346.1-201ENST00000520962 528 ntTSL 4 BASIC14.14□□□□□ -0.15
FDFT1P37268 TMEM223-202ENST00000525631 736 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
FDFT1P37268 TPO-215ENST00000539820 1157 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
FDFT1P37268 AC040162.4-201ENST00000574912 1185 ntAPPRIS P1 TSL 3 BASIC14.14□□□□□ -0.15
FDFT1P37268 AC079336.1-201ENST00000583156 420 ntTSL 3 BASIC14.14□□□□□ -0.15
FDFT1P37268 AC011447.3-201ENST00000590606 722 ntTSL 3 BASIC14.14□□□□□ -0.15
FDFT1P37268 SMIM11B-202ENST00000619874 843 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
FDFT1P37268 RBM8A-206ENST00000632555 751 ntAPPRIS P1 TSL 3 BASIC14.14□□□□□ -0.15
FDFT1P37268 NDRG4-236ENST00000566192 3265 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
FDFT1P37268 YY1AP1-208ENST00000361831 2743 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
FDFT1P37268 ALOX15B-202ENST00000380183 2739 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
FDFT1P37268 TRGV9-201ENST00000444775 1735 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
FDFT1P37268 MAP7-201ENST00000354570 4152 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
FDFT1P37268 MCF2L-204ENST00000375608 3648 ntTSL 5 BASIC14.14□□□□□ -0.15
FDFT1P37268 ZNF721-205ENST00000511833 2966 ntAPPRIS P1 TSL 4 BASIC14.14□□□□□ -0.15
FDFT1P37268 TNN-202ENST00000621086 4234 ntTSL 5 BASIC14.14□□□□□ -0.15
FDFT1P37268 ZFP1-201ENST00000332307 1502 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
FDFT1P37268 PELP1-201ENST00000301396 3673 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
FDFT1P37268 PCDHGB7-202ENST00000612073 2785 ntAPPRIS ALT2 BASIC14.14□□□□□ -0.15
FDFT1P37268 MKL1-201ENST00000355630 4496 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
FDFT1P37268 SLC38A1-204ENST00000546893 2332 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
FDFT1P37268 RREB1-210ENST00000611109 3563 ntTSL 5 BASIC14.14□□□□□ -0.15
FDFT1P37268 AC237221.1-201ENST00000561575 1881 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
FDFT1P37268 STX3-207ENST00000633708 3111 ntTSL 5 BASIC14.14□□□□□ -0.15
FDFT1P37268 TMEM26-202ENST00000399298 5151 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
FDFT1P37268 CD276-202ENST00000318443 3469 ntAPPRIS P2 TSL 2 BASIC14.14□□□□□ -0.15
FDFT1P37268 KRT8P18-201ENST00000413425 1445 ntBASIC14.14□□□□□ -0.15
FDFT1P37268 CTSS-202ENST00000448301 1421 ntTSL 2 BASIC14.14□□□□□ -0.15
FDFT1P37268 PGM3-201ENST00000283977 2219 ntTSL 5 BASIC14.14□□□□□ -0.15
FDFT1P37268 USP2-201ENST00000260187 3732 ntAPPRIS P4 TSL 1 (best) BASIC14.14□□□□□ -0.15
FDFT1P37268 LRRFIP1-202ENST00000289175 3709 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
FDFT1P37268 MAP3K12-203ENST00000547035 2944 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
FDFT1P37268 KCNT1-212ENST00000628528 7057 ntAPPRIS ALT2 TSL 2 BASIC14.14□□□□□ -0.15
FDFT1P37268 SF3A1-201ENST00000215793 5143 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
FDFT1P37268 LBHD1-201ENST00000354588 1320 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
FDFT1P37268 FUT1-201ENST00000310160 4246 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
FDFT1P37268 SRPRA-201ENST00000332118 3069 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
FDFT1P37268 RHPN1-AS1-201ENST00000518049 1918 ntBASIC14.13□□□□□ -0.15
FDFT1P37268 AP1B1-201ENST00000317368 3903 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
FDFT1P37268 RIN2-202ENST00000440354 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
FDFT1P37268 CAP1-203ENST00000372797 3105 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
FDFT1P37268 WIZ-202ENST00000389282 4067 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
FDFT1P37268 SLC1A1-201ENST00000262352 3722 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
FDFT1P37268 WNK1-201ENST00000315939 10452 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
FDFT1P37268 DCUN1D4-201ENST00000334635 4312 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
FDFT1P37268 NIT1-202ENST00000368008 2081 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
FDFT1P37268 DSTN-201ENST00000246069 3617 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
FDFT1P37268 MYOM3-201ENST00000338909 2693 ntTSL 2 BASIC14.13□□□□□ -0.15
FDFT1P37268 TRIM11-204ENST00000493030 5774 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
FDFT1P37268 PTPRH-202ENST00000376350 3877 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
FDFT1P37268 JAKMIP3-201ENST00000298622 6626 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
FDFT1P37268 MAGED4B-201ENST00000335504 2578 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
FDFT1P37268 IKBKE-201ENST00000578328 2493 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
FDFT1P37268 CNOT7-211ENST00000523917 1885 ntTSL 2 BASIC14.13□□□□□ -0.15
FDFT1P37268 ABCA2-203ENST00000371605 8151 ntAPPRIS ALT2 TSL 2 BASIC14.13□□□□□ -0.15
FDFT1P37268 CC2D1A-201ENST00000318003 3581 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
FDFT1P37268 ZNF202-207ENST00000530393 3564 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
FDFT1P37268 SLURP2-201ENST00000317543 599 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
FDFT1P37268 NOSIP-201ENST00000339093 1000 ntAPPRIS ALT1 TSL 5 BASIC14.13□□□□□ -0.15
FDFT1P37268 MOGAT3-202ENST00000379423 933 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
FDFT1P37268 MIR645-201ENST00000385283 94 ntBASIC14.13□□□□□ -0.15
FDFT1P37268 SYNGR1-205ENST00000406293 564 ntTSL 2 BASIC14.13□□□□□ -0.15
FDFT1P37268 RBM24-203ENST00000425446 1034 ntTSL 3 BASIC14.13□□□□□ -0.15
FDFT1P37268 AL139158.2-202ENST00000428151 573 ntTSL 3 BASIC14.13□□□□□ -0.15
FDFT1P37268 AL596276.2-201ENST00000447525 331 ntBASIC14.13□□□□□ -0.15
FDFT1P37268 AC005234.1-201ENST00000457851 434 ntTSL 3 BASIC14.13□□□□□ -0.15
FDFT1P37268 MUC1-218ENST00000471283 635 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
FDFT1P37268 AC108725.1-201ENST00000495472 409 ntBASIC14.13□□□□□ -0.15
FDFT1P37268 POU5F1P2-201ENST00000521750 823 ntBASIC14.13□□□□□ -0.15
FDFT1P37268 ENDOV-229ENST00000523999 864 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
FDFT1P37268 GSTZ1-219ENST00000557639 873 ntTSL 2 BASIC14.13□□□□□ -0.15
FDFT1P37268 AC009088.2-201ENST00000564743 463 ntTSL 5 BASIC14.13□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 38.3 ms