Protein–RNA interactions for Protein: Q5VTQ0

TTC39B, Tetratricopeptide repeat protein 39B, humanhuman

Predicted RBP Predictions only

Length 682 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39BQ5VTQ0 AXL-203ENST00000593513 2557 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
TTC39BQ5VTQ0 GRSF1-201ENST00000254799 6666 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
TTC39BQ5VTQ0 ARHGAP10-201ENST00000336498 3299 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
TTC39BQ5VTQ0 SCNN1A-215ENST00000540037 3040 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
TTC39BQ5VTQ0 TARDBP-201ENST00000240185 5367 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
TTC39BQ5VTQ0 BTRC-203ENST00000393441 6084 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
TTC39BQ5VTQ0 ACTG1-206ENST00000573283 2002 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
TTC39BQ5VTQ0 MSRA-201ENST00000317173 1536 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
TTC39BQ5VTQ0 MARK1-201ENST00000366917 2946 ntAPPRIS P3 TSL 1 (best) BASIC14.48□□□□□ -0.09
TTC39BQ5VTQ0 SLC8A2-203ENST00000542837 3603 ntTSL 2 BASIC14.48□□□□□ -0.09
TTC39BQ5VTQ0 MED6-201ENST00000256379 1995 ntAPPRIS P2 TSL 1 (best) BASIC14.48□□□□□ -0.09
TTC39BQ5VTQ0 EIF3F-201ENST00000309828 1254 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
TTC39BQ5VTQ0 NUDT1-203ENST00000356714 662 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
TTC39BQ5VTQ0 CD1E-202ENST00000368155 696 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
TTC39BQ5VTQ0 CD1E-204ENST00000368157 399 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
TTC39BQ5VTQ0 TSPO2-201ENST00000373158 718 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
TTC39BQ5VTQ0 IGHV1-3-201ENST00000390595 395 ntAPPRIS P1 BASIC14.48□□□□□ -0.09
TTC39BQ5VTQ0 AL512430.1-201ENST00000392575 860 ntBASIC14.48□□□□□ -0.09
TTC39BQ5VTQ0 NUDT1-204ENST00000397046 712 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
TTC39BQ5VTQ0 AC092506.1-202ENST00000401022 528 ntBASIC14.48□□□□□ -0.09
TTC39BQ5VTQ0 CAMKMT-203ENST00000403853 1114 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
TTC39BQ5VTQ0 AL606489.1-201ENST00000443515 486 ntTSL 3 BASIC14.48□□□□□ -0.09
TTC39BQ5VTQ0 AL355803.1-201ENST00000455524 188 ntTSL 2 BASIC14.48□□□□□ -0.09
TTC39BQ5VTQ0 AC087269.1-202ENST00000519147 400 ntTSL 3 BASIC14.48□□□□□ -0.09
TTC39BQ5VTQ0 AC026310.2-201ENST00000546353 728 ntTSL 4 BASIC14.48□□□□□ -0.09
TTC39BQ5VTQ0 LINC01500-204ENST00000556815 752 ntTSL 3 BASIC14.48□□□□□ -0.09
TTC39BQ5VTQ0 AC008743.1-201ENST00000596350 813 ntTSL 4 BASIC14.48□□□□□ -0.09
TTC39BQ5VTQ0 AC138894.2-201ENST00000602838 371 ntBASIC14.48□□□□□ -0.09
TTC39BQ5VTQ0 TUBGCP6-201ENST00000248846 5612 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
TTC39BQ5VTQ0 STX16-207ENST00000371141 4937 ntAPPRIS P3 TSL 2 BASIC14.48□□□□□ -0.09
TTC39BQ5VTQ0 AC046130.1-201ENST00000501954 2179 ntTSL 5 BASIC14.48□□□□□ -0.09
TTC39BQ5VTQ0 EPHA2-201ENST00000358432 3964 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
TTC39BQ5VTQ0 ERLIN1-202ENST00000407654 1453 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
TTC39BQ5VTQ0 ENO2-205ENST00000535366 2827 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
TTC39BQ5VTQ0 NLRX1-201ENST00000292199 3744 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
TTC39BQ5VTQ0 CDK5RAP1-202ENST00000346416 2122 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
TTC39BQ5VTQ0 SHMT2-203ENST00000449049 2121 ntTSL 2 BASIC14.48□□□□□ -0.09
TTC39BQ5VTQ0 LINC01662-201ENST00000342888 1859 ntTSL 2 BASIC14.48□□□□□ -0.09
TTC39BQ5VTQ0 C7orf57-203ENST00000430738 2056 ntTSL 5 BASIC14.48□□□□□ -0.09
TTC39BQ5VTQ0 L3MBTL1-204ENST00000418998 3365 ntAPPRIS ALT2 TSL 2 BASIC14.48□□□□□ -0.09
TTC39BQ5VTQ0 SLC35D1-201ENST00000235345 6162 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
TTC39BQ5VTQ0 HMGCL-203ENST00000374490 1600 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
TTC39BQ5VTQ0 GRM7-203ENST00000389336 2901 ntAPPRIS ALT1 TSL 1 (best) BASIC14.48□□□□□ -0.09
TTC39BQ5VTQ0 EGR1-201ENST00000239938 3138 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
TTC39BQ5VTQ0 VIPAS39-208ENST00000556412 1832 ntTSL 2 BASIC14.48□□□□□ -0.09
TTC39BQ5VTQ0 SLC37A3-201ENST00000326232 3349 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
TTC39BQ5VTQ0 MAP7-202ENST00000432797 4375 ntAPPRIS ALT2 TSL 2 BASIC14.48□□□□□ -0.09
TTC39BQ5VTQ0 STK26-202ENST00000394334 3288 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
TTC39BQ5VTQ0 GPR88-201ENST00000315033 3491 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
TTC39BQ5VTQ0 CHRNA1-204ENST00000409323 1585 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
TTC39BQ5VTQ0 LIMK1-208ENST00000538333 2170 ntTSL 2 BASIC14.47□□□□□ -0.09
TTC39BQ5VTQ0 LATS1-207ENST00000543571 7517 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
TTC39BQ5VTQ0 MKRN1-201ENST00000255977 3151 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
TTC39BQ5VTQ0 NLRP2B-201ENST00000434992 3194 ntAPPRIS P1 BASIC14.47□□□□□ -0.09
TTC39BQ5VTQ0 USF1-202ENST00000368020 1717 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
TTC39BQ5VTQ0 XRRA1-207ENST00000527087 2505 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
TTC39BQ5VTQ0 TRIM10-204ENST00000449742 3546 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
TTC39BQ5VTQ0 GNAS-213ENST00000371099 3709 ntTSL 5 BASIC14.47□□□□□ -0.09
TTC39BQ5VTQ0 GIPC3-201ENST00000322315 4335 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
TTC39BQ5VTQ0 DMTN-214ENST00000519907 2658 ntTSL 5 BASIC14.47□□□□□ -0.09
TTC39BQ5VTQ0 LARP7-202ENST00000344442 2286 ntAPPRIS P1 TSL 2 BASIC14.47□□□□□ -0.09
TTC39BQ5VTQ0 MKS1-201ENST00000313863 2091 ntTSL 5 BASIC14.47□□□□□ -0.09
TTC39BQ5VTQ0 SEC61B-201ENST00000223641 545 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
TTC39BQ5VTQ0 MT1H-201ENST00000332374 397 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
TTC39BQ5VTQ0 SOD2-202ENST00000367054 815 ntTSL 2 BASIC14.47□□□□□ -0.09
TTC39BQ5VTQ0 AC005392.1-201ENST00000419624 500 ntTSL 5 BASIC14.47□□□□□ -0.09
TTC39BQ5VTQ0 LINC00466-203ENST00000436475 1059 ntTSL 5 BASIC14.47□□□□□ -0.09
TTC39BQ5VTQ0 AP000356.1-201ENST00000438893 364 ntTSL 3 BASIC14.47□□□□□ -0.09
TTC39BQ5VTQ0 AL139246.4-201ENST00000442305 514 ntTSL 3 BASIC14.47□□□□□ -0.09
TTC39BQ5VTQ0 AC084030.1-201ENST00000455068 561 ntTSL 4 BASIC14.47□□□□□ -0.09
TTC39BQ5VTQ0 RN7SL788P-201ENST00000460504 316 ntBASIC14.47□□□□□ -0.09
TTC39BQ5VTQ0 RN7SL767P-201ENST00000493013 295 ntBASIC14.47□□□□□ -0.09
TTC39BQ5VTQ0 SEC61B-203ENST00000498603 587 ntTSL 3 BASIC14.47□□□□□ -0.09
TTC39BQ5VTQ0 ANXA5-210ENST00000515017 1190 ntTSL 5 BASIC14.47□□□□□ -0.09
TTC39BQ5VTQ0 KLF17P1-201ENST00000547105 1126 ntBASIC14.47□□□□□ -0.09
TTC39BQ5VTQ0 LINC01475-201ENST00000548010 766 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
TTC39BQ5VTQ0 TBC1D16-203ENST00000570373 961 ntTSL 5 BASIC14.47□□□□□ -0.09
TTC39BQ5VTQ0 AC132825.4-202ENST00000578792 434 ntBASIC14.47□□□□□ -0.09
TTC39BQ5VTQ0 MIR2392-201ENST00000584881 84 ntBASIC14.47□□□□□ -0.09
TTC39BQ5VTQ0 AC242426.4-201ENST00000606856 573 ntTSL 5 BASIC14.47□□□□□ -0.09
TTC39BQ5VTQ0 AP001184.1-201ENST00000637936 376 ntBASIC14.47□□□□□ -0.09
TTC39BQ5VTQ0 ALDH7A1-201ENST00000409134 4964 ntAPPRIS P2 TSL 1 (best) BASIC14.47□□□□□ -0.09
TTC39BQ5VTQ0 VGLL3-202ENST00000398399 10400 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
TTC39BQ5VTQ0 GGT1-203ENST00000400382 2628 ntAPPRIS P1 TSL 2 BASIC14.47□□□□□ -0.09
TTC39BQ5VTQ0 ACAD8-201ENST00000281182 2249 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
TTC39BQ5VTQ0 OS9-218ENST00000551035 2246 ntTSL 2 BASIC14.47□□□□□ -0.09
TTC39BQ5VTQ0 NPFFR1-201ENST00000277942 8921 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
TTC39BQ5VTQ0 PPM1L-201ENST00000295839 1449 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
TTC39BQ5VTQ0 CAB39L-204ENST00000409130 1411 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
TTC39BQ5VTQ0 KRT8P18-201ENST00000413425 1445 ntBASIC14.47□□□□□ -0.09
TTC39BQ5VTQ0 C7orf65-201ENST00000408988 2911 ntTSL 2 BASIC14.47□□□□□ -0.09
TTC39BQ5VTQ0 TGFBR3-204ENST00000465892 2908 ntAPPRIS ALT1 TSL 1 (best) BASIC14.47□□□□□ -0.09
TTC39BQ5VTQ0 CHRND-206ENST00000543200 2918 ntTSL 2 BASIC14.47□□□□□ -0.09
TTC39BQ5VTQ0 FAM198B-201ENST00000296530 4985 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
TTC39BQ5VTQ0 SNHG28-201ENST00000368102 2501 ntAPPRIS P1 TSL 2 BASIC14.47□□□□□ -0.09
TTC39BQ5VTQ0 HERPUD1-203ENST00000379792 1782 ntTSL 5 BASIC14.47□□□□□ -0.09
TTC39BQ5VTQ0 ZNF75A-205ENST00000574298 2347 ntAPPRIS P1 TSL 2 BASIC14.47□□□□□ -0.09
TTC39BQ5VTQ0 RGS9-210ENST00000635833 2308 ntAPPRIS ALT2 TSL 5 BASIC14.47□□□□□ -0.09
TTC39BQ5VTQ0 RNF145-202ENST00000424310 3613 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
TTC39BQ5VTQ0 LINC00887-202ENST00000414120 2880 ntTSL 3 BASIC14.47□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 44.2 ms