Protein–RNA interactions for Protein: Q00535

CDK5, Cyclin-dependent-like kinase 5, humanhuman

Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5Q00535 CELF2-216ENST00000637215 2724 ntTSL 5 BASIC12.51□□□□□ -0.41
CDK5Q00535 CD1E-206ENST00000368161 1689 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
CDK5Q00535 RMND5B-212ENST00000542098 1681 ntTSL 5 BASIC12.51□□□□□ -0.41
CDK5Q00535 AC040160.2-201ENST00000623816 1675 ntBASIC12.51□□□□□ -0.41
CDK5Q00535 ESRRB-204ENST00000509242 2849 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
CDK5Q00535 TREH-202ENST00000397925 1718 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
CDK5Q00535 AC004899.1-201ENST00000424687 1714 ntBASIC12.51□□□□□ -0.41
CDK5Q00535 DDC-204ENST00000426377 1700 ntTSL 3 BASIC12.51□□□□□ -0.41
CDK5Q00535 RSBN1-201ENST00000261441 6621 ntAPPRIS P1 TSL 2 BASIC12.51□□□□□ -0.41
CDK5Q00535 AC098934.1-201ENST00000443294 1835 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
CDK5Q00535 AC104590.1-202ENST00000558368 1921 ntBASIC12.5□□□□□ -0.41
CDK5Q00535 CHMP5-202ENST00000419016 1957 ntTSL 2 BASIC12.5□□□□□ -0.41
CDK5Q00535 RTN4-202ENST00000337526 4790 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
CDK5Q00535 ADCY6-201ENST00000307885 6464 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
CDK5Q00535 AL645937.6-201ENST00000641122 3727 ntBASIC12.5□□□□□ -0.41
CDK5Q00535 FUT1-201ENST00000310160 4246 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
CDK5Q00535 WNT5A-202ENST00000474267 6042 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
CDK5Q00535 AMOTL2-202ENST00000422605 4335 ntAPPRIS ALT2 TSL 5 BASIC12.5□□□□□ -0.41
CDK5Q00535 SLC28A1-201ENST00000286749 2636 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
CDK5Q00535 MRPS16-202ENST00000372945 2634 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
CDK5Q00535 EGLN3-205ENST00000547327 2849 ntBASIC12.5□□□□□ -0.41
CDK5Q00535 CARHSP1-217ENST00000611932 2833 ntAPPRIS P1 TSL 3 BASIC12.5□□□□□ -0.41
CDK5Q00535 TMOD1-201ENST00000259365 3343 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
CDK5Q00535 PRELP-201ENST00000343110 5747 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
CDK5Q00535 MTMR3-204ENST00000401950 6018 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
CDK5Q00535 OCEL1-201ENST00000215061 1133 ntAPPRIS P2 TSL 1 (best) BASIC12.5□□□□□ -0.41
CDK5Q00535 HFE-201ENST00000309234 1158 ntAPPRIS ALT2 TSL 2 BASIC12.5□□□□□ -0.41
CDK5Q00535 CALCA-201ENST00000331587 843 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
CDK5Q00535 ZCCHC13-201ENST00000339534 842 ntAPPRIS P1 BASIC12.5□□□□□ -0.41
CDK5Q00535 MRPL55-214ENST00000366741 603 ntAPPRIS P1 TSL 2 BASIC12.5□□□□□ -0.41
CDK5Q00535 MRPL55-218ENST00000366747 603 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
CDK5Q00535 TCEA3-201ENST00000374601 1197 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
CDK5Q00535 SMIM11A-203ENST00000399299 1033 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
CDK5Q00535 TAC3-208ENST00000441881 731 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
CDK5Q00535 NDUFAF2-203ENST00000511107 586 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
CDK5Q00535 PAGE3-202ENST00000519203 577 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
CDK5Q00535 AP001453.3-201ENST00000545800 853 ntTSL 3 BASIC12.5□□□□□ -0.41
CDK5Q00535 ZNF710-AS1-201ENST00000558334 1168 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
CDK5Q00535 RPL28-208ENST00000559463 852 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
CDK5Q00535 C15orf40-211ENST00000565712 559 ntTSL 3 BASIC12.5□□□□□ -0.41
CDK5Q00535 DUX4L45-201ENST00000566406 1057 ntBASIC12.5□□□□□ -0.41
CDK5Q00535 AC010754.1-201ENST00000582300 1061 ntTSL 3 BASIC12.5□□□□□ -0.41
CDK5Q00535 COPS9-205ENST00000607357 418 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
CDK5Q00535 AL022334.2-201ENST00000610000 484 ntBASIC12.5□□□□□ -0.41
CDK5Q00535 TAC3-211ENST00000615887 1120 ntAPPRIS P1 TSL 2 BASIC12.5□□□□□ -0.41
CDK5Q00535 AL391650.2-201ENST00000640097 941 ntTSL 5 BASIC12.5□□□□□ -0.41
CDK5Q00535 LIX1L-201ENST00000604000 3975 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
CDK5Q00535 GRM1-204ENST00000492807 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
CDK5Q00535 SVOPL-201ENST00000288513 1413 ntTSL 2 BASIC12.5□□□□□ -0.41
CDK5Q00535 TMEM176B-204ENST00000447204 1430 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
CDK5Q00535 LINC00563-201ENST00000566370 1400 ntBASIC12.5□□□□□ -0.41
CDK5Q00535 SUPT4H1-201ENST00000225504 1489 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
CDK5Q00535 TMC8-201ENST00000318430 4411 ntAPPRIS P2 TSL 1 (best) BASIC12.5□□□□□ -0.41
CDK5Q00535 UBL4B-201ENST00000334179 1478 ntAPPRIS P1 BASIC12.5□□□□□ -0.41
CDK5Q00535 SERPINF1-201ENST00000254722 1548 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
CDK5Q00535 CCDC163-203ENST00000626657 1526 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
CDK5Q00535 MRM2-201ENST00000242257 1601 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
CDK5Q00535 HOPX-202ENST00000337881 1611 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
CDK5Q00535 CBR4-202ENST00000504480 1602 ntTSL 2 BASIC12.5□□□□□ -0.41
CDK5Q00535 CSTF2-201ENST00000372972 1958 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
CDK5Q00535 DHRS7B-202ENST00000395511 2175 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
CDK5Q00535 AC110048.1-201ENST00000604293 2157 ntBASIC12.5□□□□□ -0.41
CDK5Q00535 PLIN3-201ENST00000221957 2333 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
CDK5Q00535 EFR3B-205ENST00000405108 2432 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
CDK5Q00535 DRD2-210ENST00000544518 2473 ntAPPRIS ALT1 TSL 1 (best) BASIC12.5□□□□□ -0.41
CDK5Q00535 FAM156B-201ENST00000416841 2537 ntAPPRIS P2 TSL 1 (best) BASIC12.5□□□□□ -0.41
CDK5Q00535 LPO-203ENST00000421678 2729 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
CDK5Q00535 ABCC4-206ENST00000536256 2840 ntTSL 2 BASIC12.5□□□□□ -0.41
CDK5Q00535 APBA2-212ENST00000561069 3138 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
CDK5Q00535 LEPROTL1-201ENST00000321250 3173 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
CDK5Q00535 SNX25-201ENST00000264694 3264 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
CDK5Q00535 TRHDE-AS1-201ENST00000426250 3684 ntTSL 5 BASIC12.5□□□□□ -0.41
CDK5Q00535 FAM78A-203ENST00000372271 3966 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
CDK5Q00535 TRPV1-206ENST00000571088 4105 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
CDK5Q00535 VCP-201ENST00000358901 4370 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
CDK5Q00535 EFR3B-202ENST00000401432 5162 ntTSL 2 BASIC12.5□□□□□ -0.41
CDK5Q00535 LARP4-201ENST00000293618 6296 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
CDK5Q00535 XPO7-201ENST00000252512 4861 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
CDK5Q00535 USP19-208ENST00000453664 4719 ntAPPRIS ALT2 TSL 2 BASIC12.49□□□□□ -0.41
CDK5Q00535 STAT3-202ENST00000389272 2615 ntTSL 2 BASIC12.49□□□□□ -0.41
CDK5Q00535 PDE4A-204ENST00000440014 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
CDK5Q00535 SRP72-205ENST00000510663 2473 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
CDK5Q00535 TXNDC12-201ENST00000371626 2396 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
CDK5Q00535 C12orf43-202ENST00000445832 2397 ntAPPRIS ALT2 TSL 5 BASIC12.49□□□□□ -0.41
CDK5Q00535 BAK1-203ENST00000442998 2212 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
CDK5Q00535 SLC4A5-201ENST00000346834 6233 ntAPPRIS P4 TSL 5 BASIC12.49□□□□□ -0.41
CDK5Q00535 AL357060.2-202ENST00000606998 1959 ntTSL 2 BASIC12.49□□□□□ -0.41
CDK5Q00535 RIOK3-203ENST00000577501 1904 ntAPPRIS ALT1 TSL 1 (best) BASIC12.49□□□□□ -0.41
CDK5Q00535 SLC35C2-213ENST00000543605 5740 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
CDK5Q00535 C1QTNF9-202ENST00000382071 1854 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
CDK5Q00535 KLF7-204ENST00000423015 1788 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
CDK5Q00535 GPN1-211ENST00000610189 1778 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
CDK5Q00535 ENTPD3-204ENST00000456402 1749 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
CDK5Q00535 TUBA3D-201ENST00000321253 1546 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
CDK5Q00535 ANKRD33-202ENST00000340970 1507 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
CDK5Q00535 CRYBG1-201ENST00000369066 7553 ntAPPRIS P2 TSL 1 (best) BASIC12.49□□□□□ -0.41
CDK5Q00535 OPRM1-201ENST00000229768 1465 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
CDK5Q00535 OPRM1-207ENST00000428397 1481 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
CDK5Q00535 POLR1C-203ENST00000372389 1355 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
CDK5Q00535 KLK11-207ENST00000594768 1347 ntAPPRIS P4 TSL 1 (best) BASIC12.49□□□□□ -0.41
Retrieved 100 of 98,524 protein–RNA pairs in 37.3 ms