Protein–RNA interactions for Protein: P48730

CSNK1D, Casein kinase I isoform delta, humanhuman

Predictions only

Length 415 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1DP48730 VPS36-207ENST00000611132 4607 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
CSNK1DP48730 ZFP28-204ENST00000591844 3475 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
CSNK1DP48730 MSL2-201ENST00000309993 4692 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
CSNK1DP48730 USP33-202ENST00000370792 2917 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
CSNK1DP48730 RAB18-207ENST00000535776 4811 ntTSL 2 BASIC13.79□□□□□ -0.2
CSNK1DP48730 GPATCH2L-202ENST00000312858 2438 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
CSNK1DP48730 ADRA1A-210ENST00000519229 1838 ntTSL 5 BASIC13.79□□□□□ -0.2
CSNK1DP48730 FGR-204ENST00000399173 2483 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
CSNK1DP48730 C20orf141-201ENST00000380589 730 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
CSNK1DP48730 TRBV4-1-201ENST00000390357 373 ntAPPRIS P1 BASIC13.79□□□□□ -0.2
CSNK1DP48730 TRBV4-2-201ENST00000390392 455 ntAPPRIS P1 BASIC13.79□□□□□ -0.2
CSNK1DP48730 CDRT15L2-201ENST00000399044 1048 ntAPPRIS P1 TSL 2 BASIC13.79□□□□□ -0.2
CSNK1DP48730 RPL10-203ENST00000406022 748 ntTSL 3 BASIC13.79□□□□□ -0.2
CSNK1DP48730 ID2-AS1-201ENST00000412712 953 ntTSL 5 BASIC13.79□□□□□ -0.2
CSNK1DP48730 TPT1-AS1-203ENST00000412946 744 ntTSL 3 BASIC13.79□□□□□ -0.2
CSNK1DP48730 AC005009.2-201ENST00000452471 687 ntTSL 3 BASIC13.79□□□□□ -0.2
CSNK1DP48730 AC008026.2-201ENST00000495438 348 ntBASIC13.79□□□□□ -0.2
CSNK1DP48730 AC091179.2-201ENST00000495536 532 ntTSL 3 BASIC13.79□□□□□ -0.2
CSNK1DP48730 OSMR-AS1-202ENST00000512519 837 ntTSL 2 BASIC13.79□□□□□ -0.2
CSNK1DP48730 ORMDL2-205ENST00000552672 760 ntTSL 2 BASIC13.79□□□□□ -0.2
CSNK1DP48730 AP005901.3-201ENST00000581666 415 ntTSL 3 BASIC13.79□□□□□ -0.2
CSNK1DP48730 UBA52-208ENST00000596304 554 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
CSNK1DP48730 PRMT5-AS1-206ENST00000599580 847 ntTSL 5 BASIC13.79□□□□□ -0.2
CSNK1DP48730 NAMA-206ENST00000605377 509 ntTSL 5 BASIC13.79□□□□□ -0.2
CSNK1DP48730 CSTP2-201ENST00000610599 398 ntBASIC13.79□□□□□ -0.2
CSNK1DP48730 AP001065.2-201ENST00000617205 644 ntBASIC13.79□□□□□ -0.2
CSNK1DP48730 AL132780.4-201ENST00000624870 1135 ntBASIC13.79□□□□□ -0.2
CSNK1DP48730 MGRN1-202ENST00000399577 6425 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
CSNK1DP48730 ZNF576-201ENST00000336564 2566 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
CSNK1DP48730 ATG13-215ENST00000529655 2566 ntAPPRIS P1 TSL 2 BASIC13.79□□□□□ -0.2
CSNK1DP48730 NID1-201ENST00000264187 5864 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
CSNK1DP48730 UPK3BL1-201ENST00000340457 1342 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
CSNK1DP48730 AC092978.1-201ENST00000474979 1309 ntTSL 5 BASIC13.79□□□□□ -0.2
CSNK1DP48730 AC092978.1-202ENST00000637590 1327 ntBASIC13.79□□□□□ -0.2
CSNK1DP48730 MEAF6-203ENST00000373074 2005 ntTSL 2 BASIC13.79□□□□□ -0.2
CSNK1DP48730 KBTBD7-201ENST00000379483 4734 ntAPPRIS P1 BASIC13.79□□□□□ -0.2
CSNK1DP48730 KIZ-213ENST00000620891 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
CSNK1DP48730 PCNA-202ENST00000379160 1359 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
CSNK1DP48730 ARVCF-203ENST00000406259 2871 ntAPPRIS ALT2 TSL 5 BASIC13.79□□□□□ -0.2
CSNK1DP48730 SEMA4F-202ENST00000357877 4312 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
CSNK1DP48730 FAH-201ENST00000261755 1471 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
CSNK1DP48730 DLGAP1-204ENST00000400149 5203 ntTSL 5 BASIC13.79□□□□□ -0.2
CSNK1DP48730 LRSAM1-204ENST00000373324 3044 ntTSL 2 BASIC13.79□□□□□ -0.2
CSNK1DP48730 AC013460.1-202ENST00000435062 2253 ntTSL 2 BASIC13.79□□□□□ -0.2
CSNK1DP48730 OSGIN1-201ENST00000343939 2391 ntTSL 2 BASIC13.79□□□□□ -0.2
CSNK1DP48730 HIST3H2BB-201ENST00000620438 2364 ntAPPRIS P1 BASIC13.79□□□□□ -0.2
CSNK1DP48730 REC8-213ENST00000620473 2405 ntAPPRIS P1 TSL 2 BASIC13.79□□□□□ -0.2
CSNK1DP48730 CEP128-201ENST00000216517 1606 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
CSNK1DP48730 PGM1-202ENST00000371084 2472 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
CSNK1DP48730 MAPRE2-201ENST00000300249 4265 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
CSNK1DP48730 AXL-203ENST00000593513 2557 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
CSNK1DP48730 HNRNPUL1-205ENST00000593587 2725 ntTSL 2 BASIC13.78□□□□□ -0.2
CSNK1DP48730 SLC9A7-205ENST00000616978 10024 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
CSNK1DP48730 DAZL-201ENST00000250863 3104 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
CSNK1DP48730 SNCA-204ENST00000394989 3167 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
CSNK1DP48730 LILRB5-203ENST00000449561 2137 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
CSNK1DP48730 TSC22D3-204ENST00000372384 2199 ntTSL 2 BASIC13.78□□□□□ -0.2
CSNK1DP48730 TMPRSS9-201ENST00000332578 3331 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
CSNK1DP48730 CSRNP2-201ENST00000228515 4471 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
CSNK1DP48730 RGMB-201ENST00000308234 4580 ntAPPRIS P2 TSL 1 (best) BASIC13.78□□□□□ -0.2
CSNK1DP48730 BAIAP3-216ENST00000628027 4732 ntTSL 5 BASIC13.78□□□□□ -0.2
CSNK1DP48730 PON3-201ENST00000265627 1105 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
CSNK1DP48730 KDM1B-201ENST00000297792 3811 ntAPPRIS P1 TSL 2 BASIC13.78□□□□□ -0.2
CSNK1DP48730 MORN2-201ENST00000340556 741 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
CSNK1DP48730 CMTM5-202ENST00000342473 725 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
CSNK1DP48730 APOA1-202ENST00000359492 932 ntAPPRIS P1 TSL 2 BASIC13.78□□□□□ -0.2
CSNK1DP48730 CMTM5-205ENST00000397227 818 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
CSNK1DP48730 SKOR2-201ENST00000400404 891 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
CSNK1DP48730 RPL15-205ENST00000415719 830 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
CSNK1DP48730 RPL17P11-201ENST00000417593 544 ntBASIC13.78□□□□□ -0.2
CSNK1DP48730 FAM21EP-201ENST00000417804 985 ntBASIC13.78□□□□□ -0.2
CSNK1DP48730 AC012362.1-201ENST00000434906 739 ntBASIC13.78□□□□□ -0.2
CSNK1DP48730 AL137026.2-201ENST00000437014 841 ntTSL 2 BASIC13.78□□□□□ -0.2
CSNK1DP48730 AC019118.1-201ENST00000454530 435 ntTSL 3 BASIC13.78□□□□□ -0.2
CSNK1DP48730 AC246817.2-203ENST00000517357 569 ntTSL 4 BASIC13.78□□□□□ -0.2
CSNK1DP48730 AC246817.2-202ENST00000519393 564 ntTSL 4 BASIC13.78□□□□□ -0.2
CSNK1DP48730 LZTS1-AS1-201ENST00000523103 892 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
CSNK1DP48730 YPEL4-209ENST00000534711 889 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
CSNK1DP48730 CMTM5-208ENST00000555731 831 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
CSNK1DP48730 AC013553.1-201ENST00000560906 267 ntBASIC13.78□□□□□ -0.2
CSNK1DP48730 MT2A-202ENST00000561491 581 ntTSL 2 BASIC13.78□□□□□ -0.2
CSNK1DP48730 AC012645.2-201ENST00000566190 553 ntTSL 4 BASIC13.78□□□□□ -0.2
CSNK1DP48730 MIR5572-201ENST00000583188 137 ntBASIC13.78□□□□□ -0.2
CSNK1DP48730 ZNF790-AS1-203ENST00000588906 850 ntTSL 2 BASIC13.78□□□□□ -0.2
CSNK1DP48730 AC005759.1-202ENST00000599416 415 ntTSL 3 BASIC13.78□□□□□ -0.2
CSNK1DP48730 AP003419.4-201ENST00000616071 517 ntBASIC13.78□□□□□ -0.2
CSNK1DP48730 CCDC113-206ENST00000616795 891 ntTSL 5 BASIC13.78□□□□□ -0.2
CSNK1DP48730 MIR7845-201ENST00000618396 99 ntBASIC13.78□□□□□ -0.2
CSNK1DP48730 CCL3L3-203ENST00000619989 784 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
CSNK1DP48730 RETN-203ENST00000629642 400 ntTSL 5 BASIC13.78□□□□□ -0.2
CSNK1DP48730 CTBP2P8-201ENST00000422584 1330 ntBASIC13.78□□□□□ -0.2
CSNK1DP48730 PCDHGA3-203ENST00000619750 2695 ntAPPRIS ALT2 BASIC13.78□□□□□ -0.2
CSNK1DP48730 SHANK2-202ENST00000357171 1373 ntTSL 5 BASIC13.78□□□□□ -0.2
CSNK1DP48730 DDX20-201ENST00000369702 4212 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
CSNK1DP48730 TTC7A-202ENST00000394850 4306 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
CSNK1DP48730 FCHO1-221ENST00000597512 2934 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
CSNK1DP48730 CFAP43-201ENST00000278064 2963 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
CSNK1DP48730 BTNL8-203ENST00000400707 1512 ntTSL 2 BASIC13.78□□□□□ -0.2
CSNK1DP48730 RBPMS-202ENST00000320203 3110 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
CSNK1DP48730 TNIK-202ENST00000341852 4727 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 33.3 ms