Protein–RNA interactions for Protein: P20338

RAB4A, Ras-related protein Rab-4A, humanhuman

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB4AP20338 GNLY-210ENST00000524600 750 ntAPPRIS ALT2 TSL 2 BASIC10.68□□□□□ -0.7
RAB4AP20338 GMDS-AS1-205ENST00000529893 900 ntTSL 5 BASIC10.68□□□□□ -0.7
RAB4AP20338 TAPBPL-205ENST00000544021 772 ntTSL 3 BASIC10.68□□□□□ -0.7
RAB4AP20338 C12orf76-202ENST00000546627 461 ntTSL 4 BASIC10.68□□□□□ -0.7
RAB4AP20338 AC093520.2-201ENST00000561830 333 ntBASIC10.68□□□□□ -0.7
RAB4AP20338 AC051619.7-201ENST00000568314 623 ntBASIC10.68□□□□□ -0.7
RAB4AP20338 TVP23B-206ENST00000574226 1080 ntAPPRIS ALT1 TSL 1 (best) BASIC10.68□□□□□ -0.7
RAB4AP20338 AC009630.3-201ENST00000581909 729 ntTSL 5 BASIC10.68□□□□□ -0.7
RAB4AP20338 PIN1-206ENST00000587625 878 ntTSL 2 BASIC10.68□□□□□ -0.7
RAB4AP20338 PRELID3A-208ENST00000590956 777 ntTSL 2 BASIC10.68□□□□□ -0.7
RAB4AP20338 GMFG-207ENST00000598034 1028 ntAPPRIS ALT1 TSL 1 (best) BASIC10.68□□□□□ -0.7
RAB4AP20338 FSTL3-207ENST00000605925 748 ntTSL 4 BASIC10.68□□□□□ -0.7
RAB4AP20338 MIR6080-201ENST00000617359 66 ntBASIC10.68□□□□□ -0.7
RAB4AP20338 GPER1-207ENST00000619052 571 ntTSL 2 BASIC10.68□□□□□ -0.7
RAB4AP20338 GRAMD4P3-201ENST00000621665 1669 ntBASIC10.68□□□□□ -0.7
RAB4AP20338 PDE4DIP-219ENST00000524974 8305 ntAPPRIS ALT2 TSL 5 BASIC10.68□□□□□ -0.7
RAB4AP20338 CSTF2-203ENST00000415585 2074 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
RAB4AP20338 ZFYVE19-209ENST00000564258 2059 ntTSL 2 BASIC10.68□□□□□ -0.7
RAB4AP20338 CDH8-201ENST00000299345 3728 ntTSL 5 BASIC10.68□□□□□ -0.7
RAB4AP20338 AP002360.1-203ENST00000321844 5363 ntAPPRIS P3 TSL 1 (best) BASIC10.68□□□□□ -0.7
RAB4AP20338 RHBDD1-201ENST00000341329 4883 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
RAB4AP20338 FGGY-203ENST00000371212 1640 ntTSL 2 BASIC10.68□□□□□ -0.7
RAB4AP20338 MARCH10-209ENST00000583600 3214 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
RAB4AP20338 NEK11-209ENST00000510688 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC10.68□□□□□ -0.7
RAB4AP20338 LOXHD1-203ENST00000398686 1958 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
RAB4AP20338 RHBDL3-201ENST00000269051 4661 ntAPPRIS P3 TSL 1 (best) BASIC10.68□□□□□ -0.7
RAB4AP20338 OTOA-203ENST00000388957 2703 ntAPPRIS ALT2 TSL 2 BASIC10.68□□□□□ -0.7
RAB4AP20338 PSKH1-201ENST00000291041 3481 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
RAB4AP20338 LIMK2-202ENST00000333611 3462 ntAPPRIS ALT1 TSL 1 (best) BASIC10.68□□□□□ -0.7
RAB4AP20338 IL2RG-203ENST00000374202 1534 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
RAB4AP20338 ATP6V1B1-201ENST00000234396 1891 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
RAB4AP20338 LINC00365-201ENST00000413591 2618 ntTSL 3 BASIC10.68□□□□□ -0.7
RAB4AP20338 TMEM25-208ENST00000524725 2630 ntAPPRIS ALT2 TSL 2 BASIC10.68□□□□□ -0.7
RAB4AP20338 EPPK1-201ENST00000568225 15530 ntAPPRIS ALT2 BASIC10.68□□□□□ -0.7
RAB4AP20338 APOBEC3A-202ENST00000402255 1478 ntAPPRIS P1 TSL 5 BASIC10.68□□□□□ -0.7
RAB4AP20338 CATSPER2P1-203ENST00000429276 1466 ntTSL 2 BASIC10.68□□□□□ -0.7
RAB4AP20338 PLEKHB2-207ENST00000438882 1460 ntTSL 2 BASIC10.68□□□□□ -0.7
RAB4AP20338 AC003102.2-201ENST00000589195 1469 ntBASIC10.68□□□□□ -0.7
RAB4AP20338 RNF13-201ENST00000344229 2866 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
RAB4AP20338 DRD5P1-201ENST00000456605 1438 ntBASIC10.67□□□□□ -0.7
RAB4AP20338 RPA2-203ENST00000373912 1752 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
RAB4AP20338 ESRRB-204ENST00000509242 2849 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
RAB4AP20338 RTFDC1-201ENST00000023939 1745 ntTSL 2 BASIC10.67□□□□□ -0.7
RAB4AP20338 CHST15-202ENST00000435907 4820 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
RAB4AP20338 SH2D3C-202ENST00000373276 3051 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
RAB4AP20338 TNS2-204ENST00000546602 4429 ntAPPRIS ALT2 TSL 5 BASIC10.67□□□□□ -0.7
RAB4AP20338 MST1R-215ENST00000621387 4449 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
RAB4AP20338 MUTYH-234ENST00000528013 1662 ntTSL 5 BASIC10.67□□□□□ -0.7
RAB4AP20338 MARCH9-202ENST00000548358 1668 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
RAB4AP20338 ZAN-207ENST00000620596 8396 ntAPPRIS ALT2 TSL 1 (best) BASIC10.67□□□□□ -0.7
RAB4AP20338 C8orf76-201ENST00000276704 1341 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
RAB4AP20338 SLC35G5-201ENST00000382435 1321 ntAPPRIS P1 BASIC10.67□□□□□ -0.7
RAB4AP20338 RAD51C-215ENST00000583539 1319 ntAPPRIS ALT2 TSL 2 BASIC10.67□□□□□ -0.7
RAB4AP20338 AC013472.1-203ENST00000380387 1966 ntTSL 4 BASIC10.67□□□□□ -0.7
RAB4AP20338 ABCD1P2-201ENST00000429313 1601 ntBASIC10.67□□□□□ -0.7
RAB4AP20338 SLC16A2-201ENST00000587091 4161 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
RAB4AP20338 GABBR1-201ENST00000355973 3506 ntTSL 2 BASIC10.67□□□□□ -0.7
RAB4AP20338 XPC-201ENST00000285021 3832 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
RAB4AP20338 CABP2-201ENST00000294288 925 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
RAB4AP20338 HINT1-201ENST00000304043 1081 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
RAB4AP20338 SWI5-201ENST00000320188 980 ntAPPRIS P3 TSL 1 (best) BASIC10.67□□□□□ -0.7
RAB4AP20338 MRPL55-202ENST00000336300 722 ntAPPRIS P1 TSL 2 BASIC10.67□□□□□ -0.7
RAB4AP20338 ERAS-201ENST00000338270 1266 ntAPPRIS P1 BASIC10.67□□□□□ -0.7
RAB4AP20338 CD82-202ENST00000342935 967 ntTSL 5 BASIC10.67□□□□□ -0.7
RAB4AP20338 MRPL55-206ENST00000366732 722 ntTSL 3 BASIC10.67□□□□□ -0.7
RAB4AP20338 TAF8-202ENST00000372978 794 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
RAB4AP20338 CRIP1-202ENST00000392531 485 ntAPPRIS P1 TSL 2 BASIC10.67□□□□□ -0.7
RAB4AP20338 MUSTN1-201ENST00000446157 721 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
RAB4AP20338 AC092910.3-201ENST00000484076 969 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
RAB4AP20338 GLI4-203ENST00000517468 963 ntTSL 5 BASIC10.67□□□□□ -0.7
RAB4AP20338 PXN-AS1-204ENST00000542265 854 ntTSL 2 BASIC10.67□□□□□ -0.7
RAB4AP20338 TIMM17BP1-201ENST00000545713 516 ntBASIC10.67□□□□□ -0.7
RAB4AP20338 AC021066.1-201ENST00000549788 647 ntTSL 3 BASIC10.67□□□□□ -0.7
RAB4AP20338 SORD2P-201ENST00000558556 1069 ntBASIC10.67□□□□□ -0.7
RAB4AP20338 COMMD4-207ENST00000562789 746 ntTSL 2 BASIC10.67□□□□□ -0.7
RAB4AP20338 AC010336.2-201ENST00000564226 506 ntBASIC10.67□□□□□ -0.7
RAB4AP20338 AL157832.3-201ENST00000635764 1005 ntTSL 5 BASIC10.67□□□□□ -0.7
RAB4AP20338 SEC23B-201ENST00000262544 3176 ntAPPRIS P1 TSL 5 BASIC10.67□□□□□ -0.7
RAB4AP20338 SPRTN-202ENST00000295050 3468 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
RAB4AP20338 TBC1D26-206ENST00000579428 1583 ntTSL 2 BASIC10.67□□□□□ -0.7
RAB4AP20338 AMHR2-201ENST00000257863 1863 ntAPPRIS P3 TSL 1 (best) BASIC10.67□□□□□ -0.7
RAB4AP20338 RMND1-202ENST00000367303 1854 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
RAB4AP20338 CDRT4-204ENST00000619038 2498 ntAPPRIS P2 TSL 1 (best) BASIC10.67□□□□□ -0.7
RAB4AP20338 AP2A1-201ENST00000354293 3388 ntAPPRIS ALT1 TSL 1 (best) BASIC10.67□□□□□ -0.7
RAB4AP20338 AC019205.2-203ENST00000421315 3362 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
RAB4AP20338 MBD1-207ENST00000398488 1512 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
RAB4AP20338 SMYD3-214ENST00000490107 1548 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
RAB4AP20338 ZCCHC17-206ENST00000616393 1534 ntTSL 5 BASIC10.67□□□□□ -0.7
RAB4AP20338 AGPAT1-204ENST00000395496 2103 ntAPPRIS P1 TSL 3 BASIC10.67□□□□□ -0.7
RAB4AP20338 CAST-223ENST00000508608 2425 ntAPPRIS ALT2 TSL 2 BASIC10.67□□□□□ -0.7
RAB4AP20338 PNMA3-203ENST00000619635 3627 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
RAB4AP20338 CPNE4-209ENST00000512055 5431 ntAPPRIS P1 TSL 2 BASIC10.67□□□□□ -0.7
RAB4AP20338 CORO7-PAM16-202ENST00000572467 3284 ntAPPRIS P1 TSL 2 BASIC10.67□□□□□ -0.7
RAB4AP20338 SLC12A8-207ENST00000469902 2989 ntAPPRIS P1 TSL 2 BASIC10.67□□□□□ -0.7
RAB4AP20338 ITFG2-201ENST00000228799 2361 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
RAB4AP20338 GIT2-201ENST00000320063 2094 ntTSL 5 BASIC10.67□□□□□ -0.7
RAB4AP20338 ACVR1-203ENST00000410057 2084 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
RAB4AP20338 CLN8-204ENST00000519254 1769 ntAPPRIS P1 TSL 5 BASIC10.67□□□□□ -0.7
RAB4AP20338 CIT-219ENST00000612548 1799 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
RAB4AP20338 CAMKV-217ENST00000620470 1485 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Retrieved 100 of 98,524 protein–RNA pairs in 35.8 ms