RNA–Protein interactions for RNA: ENST00000285021.11

XPC-201, Transcript of XPC complex subunit, DNA damage recognition and repair factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene XPC, Length 3,832 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XPC-201ENST00000285021 NISCHQ9Y2I1 1504 aa20.75■□□□□ 0.91
XPC-201ENST00000285021 HRCP23327 699 aa20.08■□□□□ 0.8
XPC-201ENST00000285021 PELP1Q8IZL8 1130 aaKnown RBP19.94■□□□□ 0.78
XPC-201ENST00000285021 PPARGC1BQ86YN6 1023 aaKnown RBP19.77■□□□□ 0.75
XPC-201ENST00000285021 DCAF8L2P0C7V8 631 aa19.64■□□□□ 0.74
XPC-201ENST00000285021 PCGF6Q9BYE7 350 aa19.57■□□□□ 0.72
XPC-201ENST00000285021 SCAF1Q9H7N4 1312 aaKnown RBP19.27■□□□□ 0.68
XPC-201ENST00000285021 MYT1Q01538 1121 aa19.26■□□□□ 0.67
XPC-201ENST00000285021 SUPT5HO00267 1087 aaKnown RBP19.16■□□□□ 0.66
XPC-201ENST00000285021 MYO15BQ96JP2 1530 aa19.07■□□□□ 0.64
XPC-201ENST00000285021 SHROOM4Q9ULL8 1493 aa19.04■□□□□ 0.64
XPC-201ENST00000285021 CHIC1Q5VXU3 224 aa18.88■□□□□ 0.61
XPC-201ENST00000285021 TRIM26Q12899 539 aaPredicted RBP18.71■□□□□ 0.59
XPC-201ENST00000285021 DCAF1Q9Y4B6 1507 aa18.68■□□□□ 0.58
XPC-201ENST00000285021 ZEB1P37275 1124 aaPredicted RBP18.66■□□□□ 0.58
XPC-201ENST00000285021 ACIN1Q9UKV3 1341 aaKnown RBP18.65■□□□□ 0.58
XPC-201ENST00000285021 NEUROD1Q13562 356 aa18.62■□□□□ 0.57
XPC-201ENST00000285021 LOC105371045A0A1W2PR82 267 aa18.6■□□□□ 0.57
XPC-201ENST00000285021 GTF3C3Q9Y5Q9 886 aa18.58■□□□□ 0.56
XPC-201ENST00000285021 CCDC180Q9P1Z9 1646 aa18.5■□□□□ 0.55
XPC-201ENST00000285021 CENPBP07199 599 aaPredicted RBP18.36■□□□□ 0.53
XPC-201ENST00000285021 TTBK1Q5TCY1 1321 aaPredicted RBP18.14■□□□□ 0.49
XPC-201ENST00000285021 DIEXFQ68CQ4 756 aaKnown RBP18.13■□□□□ 0.49
XPC-201ENST00000285021 BCL11AQ9H165 835 aa18.1■□□□□ 0.49
XPC-201ENST00000285021 YTHDC1Q96MU7 727 aaKnown RBP18■□□□□ 0.47
XPC-201ENST00000285021 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.98■□□□□ 0.47
XPC-201ENST00000285021 FAM9AQ8IZU1 332 aaPredicted RBP17.97■□□□□ 0.47
XPC-201ENST00000285021 CCER1Q8TC90 406 aaPredicted RBP17.95■□□□□ 0.46
XPC-201ENST00000285021 EHMT2Q96KQ7 1210 aa17.87■□□□□ 0.45
XPC-201ENST00000285021 ANP32EQ9BTT0 268 aa17.81■□□□□ 0.44
XPC-201ENST00000285021 TRIM41Q8WV44 630 aa17.73■□□□□ 0.43
XPC-201ENST00000285021 ZCCHC6Q5VYS8 1495 aaKnown RBP17.69■□□□□ 0.42
XPC-201ENST00000285021 CSRNP3Q8WYN3 585 aa17.68■□□□□ 0.42
XPC-201ENST00000285021 PRKCSHP14314 528 aaPredicted RBP17.66■□□□□ 0.42
XPC-201ENST00000285021 ZNF316A6NFI3 1004 aaPredicted RBP17.64■□□□□ 0.41
XPC-201ENST00000285021 MIER1Q8N108 512 aa17.64■□□□□ 0.41
XPC-201ENST00000285021 TSHZ2Q9NRE2 1034 aa17.57■□□□□ 0.4
XPC-201ENST00000285021 SUPT16HQ9Y5B9 1047 aaKnown RBP17.53■□□□□ 0.4
XPC-201ENST00000285021 ABCC9O60706 1549 aa17.47■□□□□ 0.39
XPC-201ENST00000285021 CLSPNQ9HAW4 1339 aa17.33■□□□□ 0.36
XPC-201ENST00000285021 BCANQ96GW7 911 aa17.23■□□□□ 0.35
XPC-201ENST00000285021 ERICH6Q7L0X2 663 aa17.2■□□□□ 0.34
XPC-201ENST00000285021 PABPN1Q86U42 306 aaKnown RBP eCLIP17.15■□□□□ 0.34
XPC-201ENST00000285021 RBM19Q9Y4C8 960 aaKnown RBP17.13■□□□□ 0.33
XPC-201ENST00000285021 RANGAP1P46060 587 aaPredicted RBP17.08■□□□□ 0.32
XPC-201ENST00000285021 FKBP8Q14318 412 aa17.03■□□□□ 0.32
XPC-201ENST00000285021 MSH5O43196 834 aa17.02■□□□□ 0.32
XPC-201ENST00000285021 HNRNPUL2Q1KMD3 747 aaKnown RBP17.02■□□□□ 0.32
XPC-201ENST00000285021 ANO8Q9HCE9 1232 aaPredicted RBP16.99■□□□□ 0.31
XPC-201ENST00000285021 ITGAEP38570 1179 aa16.95■□□□□ 0.3
XPC-201ENST00000285021 APLP2Q06481 763 aa16.95■□□□□ 0.3
XPC-201ENST00000285021 RB1CC1Q8TDY2 1594 aa16.94■□□□□ 0.3
XPC-201ENST00000285021 RSF1Q96T23 1441 aaPredicted RBP16.94■□□□□ 0.3
XPC-201ENST00000285021 KCNH8Q96L42 1107 aa16.9■□□□□ 0.3
XPC-201ENST00000285021 WRNQ14191 1432 aaPredicted RBP eCLIP16.9■□□□□ 0.31e-6■■■■■ 58.5
XPC-201ENST00000285021 DEKP35659 375 aaKnown RBP16.87■□□□□ 0.29
XPC-201ENST00000285021 NEFLP07196 543 aa16.85■□□□□ 0.29
XPC-201ENST00000285021 UBTFP17480 764 aaKnown RBP16.83■□□□□ 0.28
XPC-201ENST00000285021 CEP162Q5TB80 1403 aa16.82■□□□□ 0.28
XPC-201ENST00000285021 SCRIBQ14160 1630 aa16.77■□□□□ 0.28
XPC-201ENST00000285021 SALL2Q9Y467 1007 aaPredicted RBP16.77■□□□□ 0.27
XPC-201ENST00000285021 FANCIQ9NVI1 1328 aa16.75■□□□□ 0.27
XPC-201ENST00000285021 MYT1LQ9UL68 1186 aa16.74■□□□□ 0.27
XPC-201ENST00000285021 CCDC136Q96JN2 1154 aa16.73■□□□□ 0.27
XPC-201ENST00000285021 CDK11AQ9UQ88 783 aaPredicted RBP16.65■□□□□ 0.26
XPC-201ENST00000285021 TRIM52Q96A61 297 aa16.64■□□□□ 0.25
XPC-201ENST00000285021 NBR1Q14596 966 aa16.63■□□□□ 0.25
XPC-201ENST00000285021 TNIKQ9UKE5 1360 aa16.62■□□□□ 0.25
XPC-201ENST00000285021 ATP1B4Q9UN42 357 aaPredicted RBP16.61■□□□□ 0.25
XPC-201ENST00000285021 ZBTB4Q9P1Z0 1013 aaPredicted RBP16.57■□□□□ 0.24
XPC-201ENST00000285021 ERICH6BQ5W0A0 696 aa16.56■□□□□ 0.24
XPC-201ENST00000285021 RTN4Q9NQC3 1192 aaKnown RBP16.56■□□□□ 0.24
XPC-201ENST00000285021 IRX6P78412 446 aaPredicted RBP16.55■□□□□ 0.24
XPC-201ENST00000285021 DHX57Q6P158 1386 aaKnown RBP16.55■□□□□ 0.24
XPC-201ENST00000285021 DDX10Q13206 875 aaKnown RBP16.54■□□□□ 0.24
XPC-201ENST00000285021 IL27Q8NEV9 243 aa16.52■□□□□ 0.23
XPC-201ENST00000285021 UBE2Q2Q8WVN8 375 aa16.51■□□□□ 0.23
XPC-201ENST00000285021 SOGA1O94964 1423 aa16.48■□□□□ 0.23
XPC-201ENST00000285021 ABCC8Q09428 1581 aa16.48■□□□□ 0.23
XPC-201ENST00000285021 CCDC88BA6NC98 1476 aa16.48■□□□□ 0.23
XPC-201ENST00000285021 NOP58Q9Y2X3 529 aaKnown RBP16.46■□□□□ 0.23
XPC-201ENST00000285021 PAK3O75914 559 aaPredicted RBP16.45■□□□□ 0.22
XPC-201ENST00000285021 RTL5Q5HYW3 569 aaPredicted RBP16.4■□□□□ 0.22
XPC-201ENST00000285021 RUSC2Q8N2Y8 1516 aa16.37■□□□□ 0.21
XPC-201ENST00000285021 ANP32CO43423 234 aa16.35■□□□□ 0.21
XPC-201ENST00000285021 CECR2Q9BXF3 1484 aa16.34■□□□□ 0.21
XPC-201ENST00000285021 GOLGA3Q08378 1498 aa16.33■□□□□ 0.21
XPC-201ENST00000285021 HIRIP3Q9BW71 556 aaPredicted RBP16.33■□□□□ 0.21
XPC-201ENST00000285021 CCER2I3L3R5 266 aa16.32■□□□□ 0.2
XPC-201ENST00000285021 MROH2BQ7Z745 1585 aa16.31■□□□□ 0.2
XPC-201ENST00000285021 EIF5BO60841 1220 aaKnown RBP16.31■□□□□ 0.2
XPC-201ENST00000285021 CLIP1P30622 1438 aa16.31■□□□□ 0.2
XPC-201ENST00000285021 PPP1R15AO75807 674 aaPredicted RBP16.3■□□□□ 0.2
XPC-201ENST00000285021 HNRNPUQ00839 825 aaKnown RBP eCLIP16.3■□□□□ 0.2
XPC-201ENST00000285021 B4GALNT3Q6L9W6 998 aa16.29■□□□□ 0.2
XPC-201ENST00000285021 PPP4R2Q9NY27 417 aa16.29■□□□□ 0.2
XPC-201ENST00000285021 WIZO95785 1651 aa16.28■□□□□ 0.2
XPC-201ENST00000285021 VPS8Q8N3P4 1428 aa16.28■□□□□ 0.2
XPC-201ENST00000285021 EIF4G1Q04637 1599 aaKnown RBP16.27■□□□□ 0.19
XPC-201ENST00000285021 NACADO15069 1562 aa16.26■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms