Protein–RNA interactions for Protein: P01562

IFNA1, Interferon alpha-1/13, humanhuman

Predictions only

Length 189 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFNA1P01562 HOTTIP-203ENST00000521028 3345 ntTSL 5 BASIC10.98□□□□□ -0.65
IFNA1P01562 PTCHD1-201ENST00000379361 13714 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
IFNA1P01562 WASHC5-201ENST00000318410 4187 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
IFNA1P01562 AGAP3-205ENST00000463381 2730 ntTSL 2 BASIC10.98□□□□□ -0.65
IFNA1P01562 BCL2L13-207ENST00000418951 5062 ntTSL 3 BASIC10.98□□□□□ -0.65
IFNA1P01562 USP33-204ENST00000370794 4327 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
IFNA1P01562 TNRC6C-202ENST00000335749 9740 ntAPPRIS P4 TSL 5 BASIC10.98□□□□□ -0.65
IFNA1P01562 GAL-201ENST00000265643 818 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
IFNA1P01562 FCN2-201ENST00000291744 1057 ntAPPRIS P2 TSL 1 (best) BASIC10.98□□□□□ -0.65
IFNA1P01562 RCHY1-201ENST00000324439 4686 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
IFNA1P01562 PNRC2-202ENST00000374468 814 ntAPPRIS P1 TSL 2 BASIC10.98□□□□□ -0.65
IFNA1P01562 HIST1H2BD-202ENST00000377777 496 ntAPPRIS P1 BASIC10.98□□□□□ -0.65
IFNA1P01562 ATP5G3-202ENST00000392541 842 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
IFNA1P01562 SUMF2-203ENST00000395435 1287 ntTSL 2 BASIC10.98□□□□□ -0.65
IFNA1P01562 CAPG-203ENST00000409670 1183 ntAPPRIS P1 TSL 5 BASIC10.98□□□□□ -0.65
IFNA1P01562 XG-202ENST00000419513 979 ntAPPRIS ALT2 TSL 1 (best) BASIC10.98□□□□□ -0.65
IFNA1P01562 TREML5P-201ENST00000421694 576 ntBASIC10.98□□□□□ -0.65
IFNA1P01562 AC134915.1-201ENST00000426461 574 ntBASIC10.98□□□□□ -0.65
IFNA1P01562 TEX48-201ENST00000436752 708 ntAPPRIS P1 TSL 5 BASIC10.98□□□□□ -0.65
IFNA1P01562 AC114501.2-201ENST00000439631 535 ntBASIC10.98□□□□□ -0.65
IFNA1P01562 AC078785.1-203ENST00000467342 573 ntTSL 4 BASIC10.98□□□□□ -0.65
IFNA1P01562 IQSEC2-204ENST00000485377 835 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
IFNA1P01562 FTLP10-202ENST00000505798 471 ntBASIC10.98□□□□□ -0.65
IFNA1P01562 UBE2V2-201ENST00000517630 612 ntTSL 4 BASIC10.98□□□□□ -0.65
IFNA1P01562 CCND1-203ENST00000536559 553 ntTSL 3 BASIC10.98□□□□□ -0.65
IFNA1P01562 SEC23A-206ENST00000553970 574 ntTSL 4 BASIC10.98□□□□□ -0.65
IFNA1P01562 LINC01220-201ENST00000558575 715 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
IFNA1P01562 AC093520.2-201ENST00000561830 333 ntBASIC10.98□□□□□ -0.65
IFNA1P01562 ARL16-202ENST00000570561 768 ntTSL 2 BASIC10.98□□□□□ -0.65
IFNA1P01562 ARL16-210ENST00000574938 751 ntTSL 2 BASIC10.98□□□□□ -0.65
IFNA1P01562 AC009630.3-201ENST00000581909 729 ntTSL 5 BASIC10.98□□□□□ -0.65
IFNA1P01562 DRG2-220ENST00000583355 891 ntTSL 3 BASIC10.98□□□□□ -0.65
IFNA1P01562 AC068473.4-201ENST00000587527 585 ntTSL 4 BASIC10.98□□□□□ -0.65
IFNA1P01562 AC008738.3-201ENST00000589932 659 ntTSL 2 BASIC10.98□□□□□ -0.65
IFNA1P01562 TIMM13-202ENST00000591871 631 ntTSL 5 BASIC10.98□□□□□ -0.65
IFNA1P01562 MZF1-202ENST00000594108 1110 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
IFNA1P01562 AC004835.2-201ENST00000603762 682 ntBASIC10.98□□□□□ -0.65
IFNA1P01562 TEX48-202ENST00000612244 662 ntTSL 3 BASIC10.98□□□□□ -0.65
IFNA1P01562 AL662799.1-202ENST00000614205 422 ntBASIC10.98□□□□□ -0.65
IFNA1P01562 AP005019.2-201ENST00000615104 511 ntBASIC10.98□□□□□ -0.65
IFNA1P01562 AC009093.7-201ENST00000623853 1223 ntBASIC10.98□□□□□ -0.65
IFNA1P01562 COL8A1-202ENST00000273342 3029 ntAPPRIS P1 TSL 2 BASIC10.98□□□□□ -0.65
IFNA1P01562 SEC31A-202ENST00000311785 3909 ntAPPRIS ALT2 TSL 1 (best) BASIC10.98□□□□□ -0.65
IFNA1P01562 EHMT2-203ENST00000375537 3965 ntAPPRIS P4 TSL 1 (best) BASIC10.98□□□□□ -0.65
IFNA1P01562 TRAPPC2L-211ENST00000565504 3102 ntTSL 2 BASIC10.98□□□□□ -0.65
IFNA1P01562 TXNRD1-201ENST00000354940 4082 ntAPPRIS ALT1 TSL 5 BASIC10.98□□□□□ -0.65
IFNA1P01562 XRCC6-202ENST00000360079 2296 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
IFNA1P01562 CST3-203ENST00000398411 3286 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
IFNA1P01562 MMD2-203ENST00000406755 2372 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
IFNA1P01562 DOCK10-201ENST00000258390 7260 ntAPPRIS P3 TSL 5 BASIC10.98□□□□□ -0.65
IFNA1P01562 CTAGE13P-201ENST00000416709 2446 ntBASIC10.98□□□□□ -0.65
IFNA1P01562 ZNF771-204ENST00000566625 2415 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
IFNA1P01562 AC007952.5-201ENST00000572818 1486 ntBASIC10.98□□□□□ -0.65
IFNA1P01562 PTPRS-202ENST00000353284 4518 ntTSL 5 BASIC10.98□□□□□ -0.65
IFNA1P01562 BRD1-203ENST00000404760 4550 ntTSL 2 BASIC10.98□□□□□ -0.65
IFNA1P01562 RALGDS-203ENST00000372062 3596 ntAPPRIS ALT2 TSL 2 BASIC10.98□□□□□ -0.65
IFNA1P01562 CDCA2-202ENST00000380665 3565 ntAPPRIS ALT2 TSL 1 (best) BASIC10.98□□□□□ -0.65
IFNA1P01562 TMEM123-202ENST00000398136 3579 ntAPPRIS P2 TSL 1 (best) BASIC10.98□□□□□ -0.65
IFNA1P01562 ZNF641-203ENST00000544117 7819 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
IFNA1P01562 TCF4-276ENST00000635822 7805 ntTSL 5 BASIC10.98□□□□□ -0.65
IFNA1P01562 HLA-E-201ENST00000376630 2601 ntAPPRIS P1 BASIC10.98□□□□□ -0.65
IFNA1P01562 LDLR-203ENST00000535915 2768 ntTSL 2 BASIC10.98□□□□□ -0.65
IFNA1P01562 CHIAP2-201ENST00000369743 2829 ntTSL 5 BASIC10.98□□□□□ -0.65
IFNA1P01562 EPS15L1-201ENST00000248070 2924 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
IFNA1P01562 LRIF1-202ENST00000485275 1796 ntAPPRIS ALT2 TSL 2 BASIC10.98□□□□□ -0.65
IFNA1P01562 SYT4-205ENST00000590752 1765 ntTSL 2 BASIC10.98□□□□□ -0.65
IFNA1P01562 BANK1-202ENST00000428908 3044 ntTSL 5 BASIC10.98□□□□□ -0.65
IFNA1P01562 DNM3-206ENST00000520906 4454 ntTSL 2 BASIC10.98□□□□□ -0.65
IFNA1P01562 FAM156A-208ENST00000615092 2098 ntAPPRIS P2 TSL 5 BASIC10.97□□□□□ -0.65
IFNA1P01562 BAG5-203ENST00000445922 4867 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
IFNA1P01562 STK40-203ENST00000373130 3628 ntAPPRIS ALT1 TSL 1 (best) BASIC10.97□□□□□ -0.65
IFNA1P01562 PPP1R26P1-201ENST00000474415 3613 ntBASIC10.97□□□□□ -0.65
IFNA1P01562 EGFLAM-204ENST00000397202 2398 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
IFNA1P01562 LINC01209-201ENST00000451289 2400 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
IFNA1P01562 MADD-210ENST00000407859 5744 ntAPPRIS ALT2 TSL 1 (best) BASIC10.97□□□□□ -0.65
IFNA1P01562 AC008764.8-201ENST00000623966 2717 ntBASIC10.97□□□□□ -0.65
IFNA1P01562 TCAF2-201ENST00000357344 2958 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
IFNA1P01562 KBTBD6-201ENST00000379485 5178 ntAPPRIS P1 BASIC10.97□□□□□ -0.65
IFNA1P01562 CHRNA7-223ENST00000637033 3204 ntTSL 5 BASIC10.97□□□□□ -0.65
IFNA1P01562 KIAA0513-206ENST00000566428 7772 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
IFNA1P01562 MPV17-201ENST00000233545 998 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
IFNA1P01562 FLYWCH2-201ENST00000293981 915 ntAPPRIS P2 TSL 3 BASIC10.97□□□□□ -0.65
IFNA1P01562 TRAPPC1-201ENST00000303731 811 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
IFNA1P01562 TMEM89-201ENST00000330862 662 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
IFNA1P01562 LCE1F-201ENST00000334371 357 ntAPPRIS P1 BASIC10.97□□□□□ -0.65
IFNA1P01562 OR10H1-201ENST00000334920 1124 ntAPPRIS P1 BASIC10.97□□□□□ -0.65
IFNA1P01562 PIR-201ENST00000380420 1282 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
IFNA1P01562 AC103592.1-201ENST00000394513 664 ntBASIC10.97□□□□□ -0.65
IFNA1P01562 C1QBPP1-201ENST00000400117 770 ntBASIC10.97□□□□□ -0.65
IFNA1P01562 AC245100.3-201ENST00000441281 285 ntBASIC10.97□□□□□ -0.65
IFNA1P01562 CEND1P1-201ENST00000451006 455 ntBASIC10.97□□□□□ -0.65
IFNA1P01562 OAZ3-203ENST00000453029 729 ntTSL 5 BASIC10.97□□□□□ -0.65
IFNA1P01562 SMIM27-204ENST00000453396 1003 ntAPPRIS ALT2 TSL 3 BASIC10.97□□□□□ -0.65
IFNA1P01562 POLR2F-208ENST00000470701 584 ntTSL 3 BASIC10.97□□□□□ -0.65
IFNA1P01562 AC095060.1-201ENST00000502455 549 ntTSL 4 BASIC10.97□□□□□ -0.65
IFNA1P01562 AC009686.1-201ENST00000522494 364 ntTSL 3 BASIC10.97□□□□□ -0.65
IFNA1P01562 RAB35-202ENST00000534951 939 ntTSL 2 BASIC10.97□□□□□ -0.65
IFNA1P01562 PUS1-205ENST00000535067 838 ntTSL 3 BASIC10.97□□□□□ -0.65
IFNA1P01562 TRMT112-206ENST00000544844 1106 ntAPPRIS P3 TSL 1 (best) BASIC10.97□□□□□ -0.65
IFNA1P01562 NDUFS7-216ENST00000546283 1060 ntTSL 2 BASIC10.97□□□□□ -0.65
Retrieved 100 of 98,524 protein–RNA pairs in 45.3 ms