Protein–RNA interactions for Protein: Q9BZI7

UPF3B, Regulator of nonsense transcripts 3B, humanhuman

Known RBP Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3BQ9BZI7 BDH1-203ENST00000392379 3546 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
UPF3BQ9BZI7 POLM-201ENST00000242248 2631 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
UPF3BQ9BZI7 MGRN1-211ENST00000588994 1665 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
UPF3BQ9BZI7 TRPM1-203ENST00000542188 6004 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
UPF3BQ9BZI7 ABCA17P-202ENST00000469908 4188 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
UPF3BQ9BZI7 DDC-204ENST00000426377 1700 ntTSL 3 BASIC16.6■□□□□ 0.25
UPF3BQ9BZI7 VHL-201ENST00000256474 3737 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
UPF3BQ9BZI7 AL645937.6-201ENST00000641122 3727 ntBASIC16.6■□□□□ 0.25
UPF3BQ9BZI7 PEA15-203ENST00000368077 1021 ntTSL 2 BASIC16.6■□□□□ 0.25
UPF3BQ9BZI7 TCEA3-201ENST00000374601 1197 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
UPF3BQ9BZI7 HINT2P1-201ENST00000419438 481 ntBASIC16.6■□□□□ 0.25
UPF3BQ9BZI7 AL139125.1-201ENST00000420395 557 ntTSL 3 BASIC16.6■□□□□ 0.25
UPF3BQ9BZI7 PSMB8-AS1-204ENST00000429600 996 ntTSL 2 BASIC16.6■□□□□ 0.25
UPF3BQ9BZI7 AC253536.4-201ENST00000440539 267 ntBASIC16.6■□□□□ 0.25
UPF3BQ9BZI7 AL160290.2-202ENST00000448671 574 ntTSL 3 BASIC16.6■□□□□ 0.25
UPF3BQ9BZI7 UPF3AP2-201ENST00000457924 1132 ntBASIC16.6■□□□□ 0.25
UPF3BQ9BZI7 SPATA24-205ENST00000509959 641 ntTSL 5 BASIC16.6■□□□□ 0.25
UPF3BQ9BZI7 KRT8P1-201ENST00000557533 1207 ntBASIC16.6■□□□□ 0.25
UPF3BQ9BZI7 CENPX-208ENST00000584347 799 ntTSL 2 BASIC16.6■□□□□ 0.25
UPF3BQ9BZI7 AC008736.2-201ENST00000587554 516 ntTSL 2 BASIC16.6■□□□□ 0.25
UPF3BQ9BZI7 AL645939.5-201ENST00000606834 243 ntBASIC16.6■□□□□ 0.25
UPF3BQ9BZI7 AL139424.3-202ENST00000641619 917 ntBASIC16.6■□□□□ 0.25
UPF3BQ9BZI7 ZNF333-209ENST00000601134 1392 ntTSL 5 BASIC16.6■□□□□ 0.25
UPF3BQ9BZI7 UMODL1-206ENST00000408989 5262 ntAPPRIS P4 TSL 1 (best) BASIC16.6■□□□□ 0.25
UPF3BQ9BZI7 C8orf49-201ENST00000525043 1968 ntBASIC16.6■□□□□ 0.25
UPF3BQ9BZI7 SLC6A9-205ENST00000372310 3130 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
UPF3BQ9BZI7 TARBP2-202ENST00000394357 1402 ntTSL 3 BASIC16.6■□□□□ 0.25
UPF3BQ9BZI7 SLC47A1-206ENST00000571335 1415 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
UPF3BQ9BZI7 CDH3-201ENST00000264012 4929 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
UPF3BQ9BZI7 NOBOX-201ENST00000467773 2076 ntTSL 5 BASIC16.6■□□□□ 0.25
UPF3BQ9BZI7 AP000437.1-201ENST00000624057 2085 ntBASIC16.6■□□□□ 0.25
UPF3BQ9BZI7 HIPK3-201ENST00000303296 7408 ntTSL 5 BASIC16.6■□□□□ 0.25
UPF3BQ9BZI7 GIPR-205ENST00000590918 3289 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
UPF3BQ9BZI7 MOB3C-203ENST00000371940 5725 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
UPF3BQ9BZI7 DSN1-207ENST00000448110 2129 ntAPPRIS ALT2 TSL 2 BASIC16.6■□□□□ 0.25
UPF3BQ9BZI7 AC007663.2-201ENST00000506039 2228 ntTSL 2 BASIC16.6■□□□□ 0.25
UPF3BQ9BZI7 PRKN-205ENST00000366897 2877 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
UPF3BQ9BZI7 ZCCHC17-201ENST00000344147 1605 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
UPF3BQ9BZI7 HERPUD1-204ENST00000439977 2946 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
UPF3BQ9BZI7 PLLP-205ENST00000613167 7578 ntTSL 5 BASIC16.59■□□□□ 0.25
UPF3BQ9BZI7 KAZN-205ENST00000400798 3643 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
UPF3BQ9BZI7 ARID4B-201ENST00000264183 4995 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
UPF3BQ9BZI7 SVOPL-203ENST00000421622 1653 ntTSL 5 BASIC16.59■□□□□ 0.25
UPF3BQ9BZI7 MKL1-201ENST00000355630 4496 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
UPF3BQ9BZI7 MGAT1-205ENST00000446023 3175 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
UPF3BQ9BZI7 RASA4CP-203ENST00000446874 3193 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
UPF3BQ9BZI7 GGA1-201ENST00000325180 2528 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
UPF3BQ9BZI7 RAPH1-202ENST00000319170 9808 ntAPPRIS P4 TSL 1 (best) BASIC16.59■□□□□ 0.25
UPF3BQ9BZI7 DYRK4-201ENST00000010132 1840 ntAPPRIS P2 TSL 5 BASIC16.59■□□□□ 0.25
UPF3BQ9BZI7 EFEMP1-201ENST00000355426 1820 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
UPF3BQ9BZI7 SLC37A3-201ENST00000326232 3349 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
UPF3BQ9BZI7 NECAP2-202ENST00000443980 1929 ntTSL 2 BASIC16.59■□□□□ 0.25
UPF3BQ9BZI7 TNRC18P1-201ENST00000502875 3650 ntBASIC16.59■□□□□ 0.25
UPF3BQ9BZI7 FRMD8-201ENST00000317568 3723 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
UPF3BQ9BZI7 SEC61B-201ENST00000223641 545 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
UPF3BQ9BZI7 MT1H-201ENST00000332374 397 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
UPF3BQ9BZI7 RAB36-202ENST00000341989 936 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
UPF3BQ9BZI7 RPP25L-202ENST00000378959 888 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
UPF3BQ9BZI7 KNCN-202ENST00000396314 608 ntAPPRIS P3 TSL 4 BASIC16.59■□□□□ 0.25
UPF3BQ9BZI7 RAB1A-201ENST00000398529 1198 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
UPF3BQ9BZI7 CRCP-204ENST00000398684 492 ntTSL 2 BASIC16.59■□□□□ 0.25
UPF3BQ9BZI7 COPS7B-205ENST00000409295 1009 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
UPF3BQ9BZI7 AC006987.1-201ENST00000413610 527 ntBASIC16.59■□□□□ 0.25
UPF3BQ9BZI7 BX679664.3-201ENST00000414070 555 ntBASIC16.59■□□□□ 0.25
UPF3BQ9BZI7 AC053503.1-201ENST00000429882 519 ntTSL 3 BASIC16.59■□□□□ 0.25
UPF3BQ9BZI7 FGF13-204ENST00000436198 1165 ntTSL 2 BASIC16.59■□□□□ 0.25
UPF3BQ9BZI7 AC004898.1-201ENST00000451057 766 ntBASIC16.59■□□□□ 0.25
UPF3BQ9BZI7 AC113935.1-201ENST00000471722 555 ntBASIC16.59■□□□□ 0.25
UPF3BQ9BZI7 SEC61B-203ENST00000498603 587 ntTSL 3 BASIC16.59■□□□□ 0.25
UPF3BQ9BZI7 SLC25A15P3-201ENST00000505530 290 ntBASIC16.59■□□□□ 0.25
UPF3BQ9BZI7 ATRAID-207ENST00000606999 956 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
UPF3BQ9BZI7 MEF2C-227ENST00000626391 1182 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
UPF3BQ9BZI7 MEF2C-231ENST00000628656 1254 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
UPF3BQ9BZI7 PTPN6-202ENST00000399448 2159 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
UPF3BQ9BZI7 PCDHGA6-202ENST00000610583 5650 ntAPPRIS P1 BASIC16.59■□□□□ 0.25
UPF3BQ9BZI7 B3GAT1-203ENST00000524765 5737 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
UPF3BQ9BZI7 SLC26A8-202ENST00000394602 3144 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
UPF3BQ9BZI7 SATB2-211ENST00000614512 4972 ntTSL 5 BASIC16.59■□□□□ 0.25
UPF3BQ9BZI7 AL358781.1-202ENST00000321081 1360 ntBASIC16.59■□□□□ 0.25
UPF3BQ9BZI7 VASH2-204ENST00000366966 1369 ntTSL 5 BASIC16.59■□□□□ 0.25
UPF3BQ9BZI7 CRY2-202ENST00000443527 4203 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
UPF3BQ9BZI7 CTSL-201ENST00000340342 1436 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
UPF3BQ9BZI7 TRIM26-267ENST00000453195 3318 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
UPF3BQ9BZI7 R3HDM2-204ENST00000402412 4372 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
UPF3BQ9BZI7 AC138028.6-201ENST00000616106 1482 ntBASIC16.59■□□□□ 0.25
UPF3BQ9BZI7 TBC1D24-205ENST00000567020 6673 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
UPF3BQ9BZI7 GJB1-203ENST00000374029 1587 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
UPF3BQ9BZI7 SMTNL1-202ENST00000527972 1649 ntAPPRIS P2 TSL 5 BASIC16.59■□□□□ 0.25
UPF3BQ9BZI7 CCNI-201ENST00000237654 2772 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
UPF3BQ9BZI7 CDC20B-202ENST00000322374 1679 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
UPF3BQ9BZI7 MAP7D2-202ENST00000379651 3930 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
UPF3BQ9BZI7 STC1-202ENST00000524323 1748 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
UPF3BQ9BZI7 PLPP6-201ENST00000381883 2944 ntAPPRIS P1 BASIC16.59■□□□□ 0.25
UPF3BQ9BZI7 CKMT1B-201ENST00000300283 1779 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
UPF3BQ9BZI7 RPA2-203ENST00000373912 1752 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
UPF3BQ9BZI7 CKMT1A-204ENST00000434505 1779 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
UPF3BQ9BZI7 SNRNP27-201ENST00000244227 1802 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
UPF3BQ9BZI7 SLIT1-201ENST00000266058 7925 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
UPF3BQ9BZI7 ARSH-201ENST00000381130 1875 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
UPF3BQ9BZI7 ZNF774-201ENST00000354377 3202 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 86.5 ms