Protein–RNA interactions for Protein: P56159

GFRA1, GDNF family receptor alpha-1, humanhuman

Predictions only

Length 465 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GFRA1P56159 APOL5-201ENST00000249044 1438 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
GFRA1P56159 FAM90A12P-201ENST00000519497 2375 ntBASIC12.37□□□□□ -0.43
GFRA1P56159 FAM90A24P-201ENST00000520792 2369 ntBASIC12.37□□□□□ -0.43
GFRA1P56159 NIN-202ENST00000324330 4364 ntTSL 5 BASIC12.37□□□□□ -0.43
GFRA1P56159 LATS1-207ENST00000543571 7517 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
GFRA1P56159 AP3M2-202ENST00000396926 3545 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
GFRA1P56159 DNAJB6-204ENST00000429029 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC12.37□□□□□ -0.43
GFRA1P56159 WNT2B-202ENST00000369684 3818 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
GFRA1P56159 TRPM1-203ENST00000542188 6004 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
GFRA1P56159 LIPA-202ENST00000336233 2782 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
GFRA1P56159 ZNF785-201ENST00000395216 3282 ntAPPRIS P2 TSL 1 (best) BASIC12.37□□□□□ -0.43
GFRA1P56159 TRAIP-201ENST00000331456 2028 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
GFRA1P56159 ETNPPL-202ENST00000411864 2028 ntAPPRIS ALT1 TSL 1 (best) BASIC12.37□□□□□ -0.43
GFRA1P56159 ARFGAP1-202ENST00000370275 3467 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
GFRA1P56159 ALPL-206ENST00000539907 2241 ntTSL 2 BASIC12.37□□□□□ -0.43
GFRA1P56159 TMEM63C-201ENST00000298351 5334 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
GFRA1P56159 AC009133.1-201ENST00000569981 2449 ntTSL 2 BASIC12.37□□□□□ -0.43
GFRA1P56159 ARRDC4-201ENST00000268042 4072 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
GFRA1P56159 SIGLEC16-202ENST00000602139 2510 ntTSL 5 BASIC12.37□□□□□ -0.43
GFRA1P56159 ZNF663P-201ENST00000400371 2722 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
GFRA1P56159 FBRS-201ENST00000287468 2811 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
GFRA1P56159 RPS6KL1-210ENST00000555647 3309 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
GFRA1P56159 TDRD5-201ENST00000294848 3525 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
GFRA1P56159 CNR1-201ENST00000362094 1252 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
GFRA1P56159 PLAC9-203ENST00000372270 534 ntAPPRIS ALT2 TSL 2 BASIC12.37□□□□□ -0.43
GFRA1P56159 TRBV4-1-201ENST00000390357 373 ntAPPRIS P1 BASIC12.37□□□□□ -0.43
GFRA1P56159 TRBV4-2-201ENST00000390392 455 ntAPPRIS P1 BASIC12.37□□□□□ -0.43
GFRA1P56159 VCPKMT-201ENST00000395859 795 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
GFRA1P56159 GAPDH-204ENST00000396859 1256 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
GFRA1P56159 PSMG3-203ENST00000404674 774 ntAPPRIS P1 TSL 2 BASIC12.37□□□□□ -0.43
GFRA1P56159 AP001628.2-201ENST00000420273 784 ntTSL 2 BASIC12.37□□□□□ -0.43
GFRA1P56159 AC041040.1-201ENST00000425197 460 ntBASIC12.37□□□□□ -0.43
GFRA1P56159 AL137856.1-201ENST00000429398 773 ntTSL 3 BASIC12.37□□□□□ -0.43
GFRA1P56159 GULOP-201ENST00000454030 748 ntBASIC12.37□□□□□ -0.43
GFRA1P56159 GLYCTK-204ENST00000471180 992 ntTSL 2 BASIC12.37□□□□□ -0.43
GFRA1P56159 C21orf62-204ENST00000490358 1155 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
GFRA1P56159 APOPT1-209ENST00000492189 513 ntTSL 3 BASIC12.37□□□□□ -0.43
GFRA1P56159 CHIC2-204ENST00000512964 711 ntTSL 5 BASIC12.37□□□□□ -0.43
GFRA1P56159 TPP1-209ENST00000528657 578 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
GFRA1P56159 YPEL4-209ENST00000534711 889 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
GFRA1P56159 AC132812.1-201ENST00000583145 892 ntBASIC12.37□□□□□ -0.43
GFRA1P56159 TPGS2-209ENST00000589049 1102 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
GFRA1P56159 HKR1-220ENST00000591259 734 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
GFRA1P56159 IRF3-225ENST00000600022 882 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
GFRA1P56159 CCDC113-206ENST00000616795 891 ntTSL 5 BASIC12.37□□□□□ -0.43
GFRA1P56159 AL137793.2-201ENST00000632635 659 ntTSL 3 BASIC12.37□□□□□ -0.43
GFRA1P56159 ANKRD18A-201ENST00000399703 4041 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
GFRA1P56159 FAM168A-204ENST00000450446 1364 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
GFRA1P56159 TMEM56-RWDD3-202ENST00000604534 1491 ntAPPRIS P1 TSL 2 BASIC12.37□□□□□ -0.43
GFRA1P56159 FADS1-206ENST00000460649 1559 ntTSL 2 BASIC12.37□□□□□ -0.43
GFRA1P56159 PPARGC1B-203ENST00000394320 4803 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
GFRA1P56159 SETMAR-205ENST00000425863 1657 ntTSL 2 BASIC12.37□□□□□ -0.43
GFRA1P56159 ITGA6-202ENST00000409080 5306 ntTSL 2 BASIC12.37□□□□□ -0.43
GFRA1P56159 UMODL1-203ENST00000400424 5516 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
GFRA1P56159 ZNF618-207ENST00000615615 9289 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
GFRA1P56159 NCLP1-201ENST00000445357 1963 ntBASIC12.37□□□□□ -0.43
GFRA1P56159 TMEM78-201ENST00000323223 2175 ntAPPRIS P1 BASIC12.37□□□□□ -0.43
GFRA1P56159 MSMO1-201ENST00000261507 2269 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
GFRA1P56159 AC005840.4-201ENST00000541242 2494 ntBASIC12.37□□□□□ -0.43
GFRA1P56159 CNOT9-201ENST00000273064 4079 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
GFRA1P56159 STARD8-202ENST00000374597 4820 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
GFRA1P56159 C17orf80-202ENST00000268942 3449 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
GFRA1P56159 ZCCHC7-209ENST00000534928 2828 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
GFRA1P56159 GIT1-211ENST00000581348 2827 ntAPPRIS ALT2 TSL 2 BASIC12.37□□□□□ -0.43
GFRA1P56159 BEND3P1-201ENST00000421591 1944 ntBASIC12.37□□□□□ -0.43
GFRA1P56159 JARID2-202ENST00000397311 5595 ntAPPRIS ALT2 TSL 2 BASIC12.37□□□□□ -0.43
GFRA1P56159 HSPA8-221ENST00000533540 1826 ntTSL 5 BASIC12.37□□□□□ -0.43
GFRA1P56159 HMOX2-201ENST00000219700 1621 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
GFRA1P56159 KIF17-201ENST00000247986 3969 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
GFRA1P56159 CEP164-201ENST00000278935 5630 ntAPPRIS P2 TSL 1 (best) BASIC12.36□□□□□ -0.43
GFRA1P56159 RMDN1-201ENST00000406452 3063 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
GFRA1P56159 ZNF618-201ENST00000288466 9109 ntAPPRIS P3 TSL 2 BASIC12.36□□□□□ -0.43
GFRA1P56159 ALDH3B1-201ENST00000342456 2786 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
GFRA1P56159 GFRA1-201ENST00000355422 2583 ntAPPRIS ALT2 TSL 5 BASIC12.36□□□□□ -0.43
GFRA1P56159 PRR26-202ENST00000441152 2251 ntAPPRIS P1 TSL 2 BASIC12.36□□□□□ -0.43
GFRA1P56159 AL031056.1-202ENST00000635954 2193 ntTSL 5 BASIC12.36□□□□□ -0.43
GFRA1P56159 CEP131-203ENST00000450824 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
GFRA1P56159 AC068987.4-201ENST00000562343 2094 ntTSL 5 BASIC12.36□□□□□ -0.43
GFRA1P56159 FAM230C-201ENST00000623511 1970 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
GFRA1P56159 KANK2-205ENST00000589359 3048 ntAPPRIS ALT2 TSL 5 BASIC12.36□□□□□ -0.43
GFRA1P56159 ADAM15-203ENST00000356955 2949 ntAPPRIS P4 TSL 1 (best) BASIC12.36□□□□□ -0.43
GFRA1P56159 SERF1B-204ENST00000506542 1666 ntTSL 3 BASIC12.36□□□□□ -0.43
GFRA1P56159 MGRN1-211ENST00000588994 1665 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
GFRA1P56159 ATP13A2-202ENST00000341676 3681 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
GFRA1P56159 PAX5-204ENST00000377852 1472 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
GFRA1P56159 LINC01114-203ENST00000425879 2434 ntTSL 2 BASIC12.36□□□□□ -0.43
GFRA1P56159 FRMD3-201ENST00000304195 5297 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
GFRA1P56159 ABI2-213ENST00000424558 2240 ntTSL 2 BASIC12.36□□□□□ -0.43
GFRA1P56159 ANK1-203ENST00000314214 1185 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
GFRA1P56159 AK1-202ENST00000373156 757 ntAPPRIS P1 TSL 3 BASIC12.36□□□□□ -0.43
GFRA1P56159 STK16-203ENST00000409516 895 ntTSL 2 BASIC12.36□□□□□ -0.43
GFRA1P56159 ID2-AS1-201ENST00000412712 953 ntTSL 5 BASIC12.36□□□□□ -0.43
GFRA1P56159 SNX3-204ENST00000426155 1072 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
GFRA1P56159 IZUMO1R-202ENST00000440961 805 ntAPPRIS ALT2 TSL 5 BASIC12.36□□□□□ -0.43
GFRA1P56159 AC068057.1-201ENST00000453322 709 ntTSL 2 BASIC12.36□□□□□ -0.43
GFRA1P56159 PFN2-212ENST00000490975 858 ntTSL 4 BASIC12.36□□□□□ -0.43
GFRA1P56159 AC008026.2-201ENST00000495438 348 ntBASIC12.36□□□□□ -0.43
GFRA1P56159 ALG1L6P-201ENST00000515248 758 ntBASIC12.36□□□□□ -0.43
GFRA1P56159 KRT18P37-201ENST00000520711 1282 ntBASIC12.36□□□□□ -0.43
GFRA1P56159 PPCDC-206ENST00000564923 757 ntTSL 5 BASIC12.36□□□□□ -0.43
Retrieved 100 of 98,524 protein–RNA pairs in 33.4 ms