Protein–RNA interactions for Protein: P36941

LTBR, Tumor necrosis factor receptor superfamily member 3, humanhuman

Predictions only

Length 435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LTBRP36941 DDHD1-201ENST00000323669 5503 ntTSL 2 BASIC13.91□□□□□ -0.18
LTBRP36941 KCNT1-202ENST00000371757 4717 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
LTBRP36941 LINC01565-201ENST00000356020 2697 ntTSL 2 BASIC13.91□□□□□ -0.18
LTBRP36941 AC144831.1-201ENST00000573312 2656 ntBASIC13.91□□□□□ -0.18
LTBRP36941 MAGED4-211ENST00000599522 2669 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
LTBRP36941 GLP2R-204ENST00000574745 1882 ntTSL 2 BASIC13.91□□□□□ -0.18
LTBRP36941 PKD2L2-205ENST00000508638 2333 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
LTBRP36941 SAP18-208ENST00000621421 2300 ntAPPRIS P2 TSL 1 (best) BASIC13.91□□□□□ -0.18
LTBRP36941 CRYBG2-210ENST00000527815 2523 ntAPPRIS ALT2 TSL 2 BASIC13.91□□□□□ -0.18
LTBRP36941 PI16-203ENST00000611814 2083 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
LTBRP36941 PRKD2-201ENST00000291281 3070 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
LTBRP36941 GAS7-203ENST00000432992 4970 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
LTBRP36941 TTC13-201ENST00000366661 3253 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
LTBRP36941 CCDC138-203ENST00000412964 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
LTBRP36941 RNASE8-201ENST00000308227 634 ntAPPRIS P1 BASIC13.91□□□□□ -0.18
LTBRP36941 TPT1-201ENST00000309246 1008 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
LTBRP36941 CRCT1-201ENST00000368790 700 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
LTBRP36941 HIST1H3H-201ENST00000369163 1237 ntAPPRIS P1 BASIC13.91□□□□□ -0.18
LTBRP36941 ZNF684-201ENST00000372696 1009 ntTSL 3 BASIC13.91□□□□□ -0.18
LTBRP36941 C9orf24-202ENST00000379124 648 ntTSL 3 BASIC13.91□□□□□ -0.18
LTBRP36941 AC004884.1-201ENST00000393647 319 ntBASIC13.91□□□□□ -0.18
LTBRP36941 FAM126A-201ENST00000409763 616 ntTSL 2 BASIC13.91□□□□□ -0.18
LTBRP36941 LINC01494-201ENST00000419511 1011 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
LTBRP36941 AL049792.1-201ENST00000424708 1262 ntBASIC13.91□□□□□ -0.18
LTBRP36941 AP000346.2-202ENST00000425948 383 ntBASIC13.91□□□□□ -0.18
LTBRP36941 CNBP-202ENST00000441626 1040 ntTSL 2 BASIC13.91□□□□□ -0.18
LTBRP36941 CHCHD2P6-201ENST00000454346 447 ntBASIC13.91□□□□□ -0.18
LTBRP36941 RN7SL340P-201ENST00000470792 296 ntBASIC13.91□□□□□ -0.18
LTBRP36941 ATP5L2-201ENST00000505920 799 ntAPPRIS P1 BASIC13.91□□□□□ -0.18
LTBRP36941 HNRNPA1P55-201ENST00000505935 955 ntBASIC13.91□□□□□ -0.18
LTBRP36941 LINC02507-201ENST00000509370 1028 ntTSL 3 BASIC13.91□□□□□ -0.18
LTBRP36941 PRDX2P3-201ENST00000515779 586 ntBASIC13.91□□□□□ -0.18
LTBRP36941 PMM2-216ENST00000569958 698 ntTSL 2 BASIC13.91□□□□□ -0.18
LTBRP36941 AC127496.3-201ENST00000576032 494 ntTSL 3 BASIC13.91□□□□□ -0.18
LTBRP36941 AC079336.3-201ENST00000577227 475 ntTSL 3 BASIC13.91□□□□□ -0.18
LTBRP36941 ALOX12P1-201ENST00000579299 1229 ntBASIC13.91□□□□□ -0.18
LTBRP36941 DSCR9-203ENST00000581640 472 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
LTBRP36941 KRT18P8-201ENST00000581937 1246 ntBASIC13.91□□□□□ -0.18
LTBRP36941 CYP4F10P-201ENST00000589560 752 ntBASIC13.91□□□□□ -0.18
LTBRP36941 GRAMD1A-211ENST00000599564 2825 ntTSL 5 BASIC13.91□□□□□ -0.18
LTBRP36941 BANP-201ENST00000286122 2368 ntTSL 5 BASIC13.91□□□□□ -0.18
LTBRP36941 C12orf29-201ENST00000356891 2919 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
LTBRP36941 AGFG1-204ENST00000409315 2912 ntTSL 5 BASIC13.91□□□□□ -0.18
LTBRP36941 CARMIL3-201ENST00000342740 4597 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
LTBRP36941 CACNB4-201ENST00000201943 1389 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
LTBRP36941 HPGD-204ENST00000504433 1910 ntTSL 2 BASIC13.91□□□□□ -0.18
LTBRP36941 PDE8B-202ENST00000333194 2572 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
LTBRP36941 CACNA2D4-209ENST00000538450 1498 ntTSL 2 BASIC13.91□□□□□ -0.18
LTBRP36941 AC068587.6-202ENST00000641839 5619 ntBASIC13.91□□□□□ -0.18
LTBRP36941 VRK3-217ENST00000599538 2126 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
LTBRP36941 AC126177.1-201ENST00000547829 2218 ntBASIC13.91□□□□□ -0.18
LTBRP36941 ARHGEF28-201ENST00000296794 5246 ntTSL 5 BASIC13.91□□□□□ -0.18
LTBRP36941 SERPIND1-202ENST00000406799 1798 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
LTBRP36941 OVCH1-AS1-204ENST00000641955 5529 ntBASIC13.91□□□□□ -0.18
LTBRP36941 SPIRE1-201ENST00000309836 1877 ntTSL 2 BASIC13.91□□□□□ -0.18
LTBRP36941 NFATC4-231ENST00000557451 5613 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
LTBRP36941 NACC1-201ENST00000292431 4445 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
LTBRP36941 RBFOX3-211ENST00000583458 2934 ntAPPRIS ALT2 TSL 5 BASIC13.91□□□□□ -0.18
LTBRP36941 PPP1R21-201ENST00000281394 3137 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
LTBRP36941 SURF4-209ENST00000618229 3200 ntTSL 2 BASIC13.9□□□□□ -0.18
LTBRP36941 MED17-201ENST00000251871 5142 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
LTBRP36941 CLCNKA-201ENST00000331433 2475 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
LTBRP36941 HOXA-AS2-202ENST00000517635 2455 ntTSL 2 BASIC13.9□□□□□ -0.18
LTBRP36941 SNAP91-205ENST00000439399 4452 ntAPPRIS P2 TSL 5 BASIC13.9□□□□□ -0.18
LTBRP36941 TRIP12-205ENST00000409677 1507 ntTSL 2 BASIC13.9□□□□□ -0.18
LTBRP36941 FKBP9-214ENST00000538336 3621 ntTSL 2 BASIC13.9□□□□□ -0.18
LTBRP36941 ZFAND5-205ENST00000376962 2785 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
LTBRP36941 EFEMP1-201ENST00000355426 1820 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
LTBRP36941 LILRB2-202ENST00000391746 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
LTBRP36941 TRIT1-214ENST00000537440 2026 ntTSL 5 BASIC13.9□□□□□ -0.18
LTBRP36941 SH3D21-205ENST00000505871 2205 ntTSL 2 BASIC13.9□□□□□ -0.18
LTBRP36941 TCAF2-203ENST00000425618 2448 ntTSL 2 BASIC13.9□□□□□ -0.18
LTBRP36941 MANSC1-202ENST00000535902 5831 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
LTBRP36941 LITAF-209ENST00000571688 2632 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
LTBRP36941 ULBP3-201ENST00000367339 988 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
LTBRP36941 KHDC1L-201ENST00000370388 635 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
LTBRP36941 TFAM-201ENST00000373895 973 ntTSL 2 BASIC13.9□□□□□ -0.18
LTBRP36941 GSTM2P1-201ENST00000405166 654 ntBASIC13.9□□□□□ -0.18
LTBRP36941 AL161644.1-201ENST00000426901 1111 ntTSL 2 BASIC13.9□□□□□ -0.18
LTBRP36941 AC069257.3-201ENST00000431391 708 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
LTBRP36941 RPL21P135-201ENST00000442539 791 ntBASIC13.9□□□□□ -0.18
LTBRP36941 AC116347.1-201ENST00000442824 720 ntBASIC13.9□□□□□ -0.18
LTBRP36941 AC010136.1-201ENST00000450996 568 ntTSL 4 BASIC13.9□□□□□ -0.18
LTBRP36941 AC253536.5-201ENST00000506097 347 ntBASIC13.9□□□□□ -0.18
LTBRP36941 SMUG1-213ENST00000506595 712 ntTSL 5 BASIC13.9□□□□□ -0.18
LTBRP36941 FP325317.1-201ENST00000539936 1042 ntBASIC13.9□□□□□ -0.18
LTBRP36941 AC127496.5-202ENST00000572036 869 ntTSL 5 BASIC13.9□□□□□ -0.18
LTBRP36941 GACAT2-201ENST00000579368 818 ntTSL 2 BASIC13.9□□□□□ -0.18
LTBRP36941 ZNF674-AS1-202ENST00000609887 672 ntTSL 5 BASIC13.9□□□□□ -0.18
LTBRP36941 Metazoa_SRP.64-201ENST00000611904 268 ntBASIC13.9□□□□□ -0.18
LTBRP36941 CADM1-221ENST00000612235 1042 ntTSL 5 BASIC13.9□□□□□ -0.18
LTBRP36941 MIR6871-201ENST00000613433 56 ntBASIC13.9□□□□□ -0.18
LTBRP36941 TNNI2-206ENST00000617947 699 ntAPPRIS ALT1 TSL 5 BASIC13.9□□□□□ -0.18
LTBRP36941 SLC50A1-214ENST00000622581 1245 ntTSL 5 BASIC13.9□□□□□ -0.18
LTBRP36941 DNPEP-205ENST00000373972 1578 ntTSL 2 BASIC13.9□□□□□ -0.18
LTBRP36941 GAS6-AS2-201ENST00000608651 1952 ntTSL 2 BASIC13.9□□□□□ -0.18
LTBRP36941 GPRC5C-202ENST00000392627 2988 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
LTBRP36941 RAP2C-201ENST00000342983 3896 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
LTBRP36941 GABRB3-215ENST00000622697 5876 ntTSL 5 BASIC13.9□□□□□ -0.18
LTBRP36941 E2F6-201ENST00000307236 3317 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 35.4 ms