Protein–RNA interactions for Protein: O00501

CLDN5, Claudin-5, humanhuman

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN5O00501 GPT2-201ENST00000340124 3984 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
CLDN5O00501 MKL1-202ENST00000396617 4505 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
CLDN5O00501 C20orf166-AS1-203ENST00000475015 2585 ntTSL 2 BASIC14.59□□□□□ -0.07
CLDN5O00501 SUV39H2-201ENST00000313519 3087 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
CLDN5O00501 MEX3B-202ENST00000558133 4333 ntBASIC14.59□□□□□ -0.07
CLDN5O00501 IL1F10-202ENST00000393197 1366 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
CLDN5O00501 ABCA7-203ENST00000435683 6211 ntAPPRIS ALT2 TSL 5 BASIC14.59□□□□□ -0.07
CLDN5O00501 ARHGEF10-207ENST00000520359 5472 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
CLDN5O00501 ZSCAN16-AS1-201ENST00000600652 2163 ntTSL 2 BASIC14.58□□□□□ -0.07
CLDN5O00501 PRKACB-205ENST00000370688 1905 ntTSL 1 (best) BASIC14.58□□□□□ -0.07
CLDN5O00501 MIOS-201ENST00000340080 3453 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
CLDN5O00501 POPDC2-201ENST00000264231 1679 ntTSL 1 (best) BASIC14.58□□□□□ -0.07
CLDN5O00501 SERF1B-204ENST00000506542 1666 ntTSL 3 BASIC14.58□□□□□ -0.07
CLDN5O00501 PKN1-202ENST00000342216 2960 ntTSL 2 BASIC14.58□□□□□ -0.07
CLDN5O00501 SLC52A1-203ENST00000512825 2989 ntTSL 2 BASIC14.58□□□□□ -0.07
CLDN5O00501 CEP164-201ENST00000278935 5630 ntAPPRIS P2 TSL 1 (best) BASIC14.58□□□□□ -0.07
CLDN5O00501 LIG1-202ENST00000427526 3027 ntAPPRIS ALT2 TSL 2 BASIC14.58□□□□□ -0.07
CLDN5O00501 LRRC17-202ENST00000339431 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
CLDN5O00501 APOBEC3D-202ENST00000427494 1961 ntTSL 1 (best) BASIC14.58□□□□□ -0.07
CLDN5O00501 ALDH3B1-201ENST00000342456 2786 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
CLDN5O00501 ATG9A-204ENST00000409422 2512 ntTSL 5 BASIC14.58□□□□□ -0.07
CLDN5O00501 LSS-211ENST00000522411 2523 ntTSL 2 BASIC14.58□□□□□ -0.07
CLDN5O00501 TRIM4-201ENST00000349062 3374 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
CLDN5O00501 KRBA2-202ENST00000396267 2562 ntTSL 2 BASIC14.58□□□□□ -0.08
CLDN5O00501 KRT17P4-205ENST00000579946 2555 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
CLDN5O00501 ATP6V0A4-201ENST00000310018 3135 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
CLDN5O00501 NXF1-201ENST00000294172 2346 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
CLDN5O00501 SCUBE2-201ENST00000309263 3727 ntTSL 5 BASIC14.58□□□□□ -0.08
CLDN5O00501 GLIS2-202ENST00000433375 3705 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
CLDN5O00501 DANT2-201ENST00000430756 2079 ntTSL 3 BASIC14.58□□□□□ -0.08
CLDN5O00501 PPRC1-203ENST00000413464 4580 ntTSL 2 BASIC14.58□□□□□ -0.08
CLDN5O00501 AC021305.1-201ENST00000520656 1514 ntBASIC14.58□□□□□ -0.08
CLDN5O00501 ATG9B-203ENST00000469530 3489 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.08
CLDN5O00501 SLC38A9-202ENST00000396865 2927 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
CLDN5O00501 OSBP2-219ENST00000535268 3248 ntTSL 2 BASIC14.58□□□□□ -0.08
CLDN5O00501 TBX6-202ENST00000395224 1803 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
CLDN5O00501 TRIB2-201ENST00000155926 4391 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
CLDN5O00501 CST1-201ENST00000304749 760 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
CLDN5O00501 POLR2L-201ENST00000322028 892 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
CLDN5O00501 SRA1-201ENST00000336283 2107 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
CLDN5O00501 G0S2-201ENST00000367029 866 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
CLDN5O00501 AC018814.1-201ENST00000418972 357 ntTSL 3 BASIC14.58□□□□□ -0.08
CLDN5O00501 ACTG1P19-201ENST00000418987 1116 ntBASIC14.58□□□□□ -0.08
CLDN5O00501 DLEU2-205ENST00000443587 705 ntTSL 5 BASIC14.58□□□□□ -0.08
CLDN5O00501 RPL35P9-201ENST00000446059 350 ntBASIC14.58□□□□□ -0.08
CLDN5O00501 BX072579.1-201ENST00000449453 344 ntTSL 3 BASIC14.58□□□□□ -0.08
CLDN5O00501 PIN4P1-201ENST00000451079 396 ntBASIC14.58□□□□□ -0.08
CLDN5O00501 BUD31-205ENST00000456893 512 ntTSL 5 BASIC14.58□□□□□ -0.08
CLDN5O00501 PGAP2-208ENST00000464229 863 ntTSL 3 BASIC14.58□□□□□ -0.08
CLDN5O00501 NCK1-AS1-203ENST00000474250 827 ntTSL 2 BASIC14.58□□□□□ -0.08
CLDN5O00501 OSMR-AS1-202ENST00000512519 837 ntTSL 2 BASIC14.58□□□□□ -0.08
CLDN5O00501 LOXL1-AS1-207ENST00000565689 735 ntTSL 3 BASIC14.58□□□□□ -0.08
CLDN5O00501 AC020636.2-201ENST00000569170 1189 ntAPPRIS P5 TSL 1 (best) BASIC14.58□□□□□ -0.08
CLDN5O00501 AC095350.1-204ENST00000585405 616 ntTSL 5 BASIC14.58□□□□□ -0.08
CLDN5O00501 SEPT14P19-201ENST00000587432 336 ntTSL 2 BASIC14.58□□□□□ -0.08
CLDN5O00501 AL356740.1-201ENST00000602192 1297 ntBASIC14.58□□□□□ -0.08
CLDN5O00501 AC114296.1-204ENST00000637197 1173 ntAPPRIS P5 TSL 5 BASIC14.58□□□□□ -0.08
CLDN5O00501 CLOCK-211ENST00000513440 3580 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
CLDN5O00501 CSF3-204ENST00000394149 1583 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
CLDN5O00501 NTNG1-208ENST00000370074 3048 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
CLDN5O00501 POLG-201ENST00000268124 4500 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
CLDN5O00501 ARL1-202ENST00000536227 1322 ntTSL 2 BASIC14.58□□□□□ -0.08
CLDN5O00501 BEND3P1-201ENST00000421591 1944 ntBASIC14.58□□□□□ -0.08
CLDN5O00501 SOGA3-201ENST00000465909 3756 ntTSL 5 BASIC14.58□□□□□ -0.08
CLDN5O00501 AXL-201ENST00000301178 4737 ntAPPRIS P4 TSL 1 (best) BASIC14.58□□□□□ -0.08
CLDN5O00501 PLEKHD1-201ENST00000322564 4865 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
CLDN5O00501 PHKG1-201ENST00000297373 1431 ntAPPRIS P2 TSL 1 (best) BASIC14.58□□□□□ -0.08
CLDN5O00501 SRC-202ENST00000373558 4304 ntTSL 5 BASIC14.57□□□□□ -0.08
CLDN5O00501 AC011298.1-201ENST00000407635 3398 ntTSL 2 BASIC14.57□□□□□ -0.08
CLDN5O00501 GORASP1-201ENST00000319283 3722 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
CLDN5O00501 MUC1-225ENST00000612778 1836 ntAPPRIS ALT2 TSL 5 BASIC14.57□□□□□ -0.08
CLDN5O00501 TNFAIP8L1-201ENST00000327473 3814 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
CLDN5O00501 TNFAIP8L1-202ENST00000536716 3845 ntAPPRIS P1 TSL 2 BASIC14.57□□□□□ -0.08
CLDN5O00501 TMEM78-201ENST00000323223 2175 ntAPPRIS P1 BASIC14.57□□□□□ -0.08
CLDN5O00501 UBAP1-202ENST00000359544 2535 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
CLDN5O00501 GDAP1L1-206ENST00000537864 2855 ntTSL 2 BASIC14.57□□□□□ -0.08
CLDN5O00501 ASS1-203ENST00000372393 1548 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
CLDN5O00501 MRC2-202ENST00000446119 3201 ntTSL 2 BASIC14.57□□□□□ -0.08
CLDN5O00501 RDH12-203ENST00000551171 1879 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
CLDN5O00501 PRRT2-202ENST00000358758 2567 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
CLDN5O00501 GK-205ENST00000378946 3638 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
CLDN5O00501 TMEM200C-202ENST00000581347 10638 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
CLDN5O00501 ZNF384-204ENST00000396801 3008 ntAPPRIS P1 TSL 2 BASIC14.57□□□□□ -0.08
CLDN5O00501 SCAF4-202ENST00000399804 4127 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
CLDN5O00501 ZBTB2-201ENST00000325144 3090 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
CLDN5O00501 LCE3B-201ENST00000335633 288 ntAPPRIS P1 BASIC14.57□□□□□ -0.08
CLDN5O00501 CMTM5-202ENST00000342473 725 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
CLDN5O00501 CMTM5-205ENST00000397227 818 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
CLDN5O00501 AC099567.1-201ENST00000414418 931 ntTSL 5 BASIC14.57□□□□□ -0.08
CLDN5O00501 HTATIP2-202ENST00000421577 886 ntAPPRIS P1 TSL 2 BASIC14.57□□□□□ -0.08
CLDN5O00501 TRPM2-AS-201ENST00000423310 586 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
CLDN5O00501 HNRNPA1P2-207ENST00000432375 960 ntBASIC14.57□□□□□ -0.08
CLDN5O00501 KRT18P62-201ENST00000446618 1287 ntBASIC14.57□□□□□ -0.08
CLDN5O00501 GLYCTK-204ENST00000471180 992 ntTSL 2 BASIC14.57□□□□□ -0.08
CLDN5O00501 AP003068.3-201ENST00000527789 175 ntTSL 2 BASIC14.57□□□□□ -0.08
CLDN5O00501 CMTM5-208ENST00000555731 831 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
CLDN5O00501 AC005759.1-202ENST00000599416 415 ntTSL 3 BASIC14.57□□□□□ -0.08
CLDN5O00501 AL356417.2-202ENST00000608986 532 ntTSL 3 BASIC14.57□□□□□ -0.08
CLDN5O00501 AL132780.4-201ENST00000624870 1135 ntBASIC14.57□□□□□ -0.08
CLDN5O00501 IKBKG-208ENST00000611176 1654 ntTSL 2 BASIC14.57□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 56.5 ms