Protein–RNA interactions for Protein: Q96II8

LRCH3, Leucine-rich repeat and calponin homology domain-containing protein 3, humanhuman

Predictions only

Length 777 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3Q96II8 RN7SL340P-201ENST00000470792 296 ntBASIC14.99□□□□□ -0.01
LRCH3Q96II8 AC112250.1-201ENST00000504640 745 ntBASIC14.99□□□□□ -0.01
LRCH3Q96II8 AC079340.2-201ENST00000504957 495 ntTSL 2 BASIC14.99□□□□□ -0.01
LRCH3Q96II8 CCDC7-208ENST00000537047 657 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
LRCH3Q96II8 MSRB1-205ENST00000564908 550 ntTSL 3 BASIC14.99□□□□□ -0.01
LRCH3Q96II8 AL137246.1-201ENST00000607072 977 ntBASIC14.99□□□□□ -0.01
LRCH3Q96II8 AC073575.2-201ENST00000614212 627 ntBASIC14.99□□□□□ -0.01
LRCH3Q96II8 ERAS-202ENST00000636362 826 ntAPPRIS P1 TSL 3 BASIC14.99□□□□□ -0.01
LRCH3Q96II8 LIN9-201ENST00000328205 3567 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
LRCH3Q96II8 CCHCR1-201ENST00000376266 2625 ntAPPRIS P3 TSL 1 (best) BASIC14.99□□□□□ -0.01
LRCH3Q96II8 HSDL1-201ENST00000219439 3519 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
LRCH3Q96II8 ALK-201ENST00000389048 6220 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
LRCH3Q96II8 FKBP9-201ENST00000242209 3462 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
LRCH3Q96II8 PDE3B-202ENST00000455098 3665 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
LRCH3Q96II8 MKRN3-201ENST00000314520 2337 ntAPPRIS P1 BASIC14.99□□□□□ -0.01
LRCH3Q96II8 CXCL12-201ENST00000343575 1857 ntAPPRIS P3 TSL 1 (best) BASIC14.99□□□□□ -0.01
LRCH3Q96II8 C17orf80-203ENST00000359042 3645 ntAPPRIS P3 TSL 5 BASIC14.99□□□□□ -0.01
LRCH3Q96II8 TPD52-201ENST00000379096 4041 ntAPPRIS ALT1 TSL 1 (best) BASIC14.99□□□□□ -0.01
LRCH3Q96II8 LZTS1-202ENST00000381569 5706 ntAPPRIS P1 TSL 5 BASIC14.99□□□□□ -0.01
LRCH3Q96II8 CDK2AP1-205ENST00000542174 1812 ntTSL 2 BASIC14.99□□□□□ -0.01
LRCH3Q96II8 BIRC2-214ENST00000621637 3331 ntTSL 5 BASIC14.99□□□□□ -0.01
LRCH3Q96II8 CYLD-202ENST00000398568 3536 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
LRCH3Q96II8 AC004706.4-201ENST00000634965 3537 ntAPPRIS P1 BASIC14.99□□□□□ -0.01
LRCH3Q96II8 ZHX1-201ENST00000297857 5200 ntAPPRIS P1 TSL 5 BASIC14.99□□□□□ -0.01
LRCH3Q96II8 GTF3C4-201ENST00000372146 9043 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
LRCH3Q96II8 TMPRSS6-202ENST00000381792 3260 ntAPPRIS ALT2 TSL 5 BASIC14.98□□□□□ -0.01
LRCH3Q96II8 RAB1A-203ENST00000409784 2447 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
LRCH3Q96II8 PRKD2-206ENST00000595515 3012 ntTSL 2 BASIC14.98□□□□□ -0.01
LRCH3Q96II8 TNFSF13-201ENST00000338784 1971 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
LRCH3Q96II8 EEF1AKMT3-201ENST00000300209 2563 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
LRCH3Q96II8 C17orf107-201ENST00000381365 3199 ntAPPRIS P2 TSL 2 BASIC14.98□□□□□ -0.01
LRCH3Q96II8 KCTD1-203ENST00000417602 1705 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
LRCH3Q96II8 RSPO1-202ENST00000401068 2320 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
LRCH3Q96II8 MFN2-203ENST00000444836 4531 ntAPPRIS P1 TSL 2 BASIC14.98□□□□□ -0.01
LRCH3Q96II8 RNF182-208ENST00000544682 3495 ntAPPRIS P1 TSL 4 BASIC14.98□□□□□ -0.01
LRCH3Q96II8 GALNT16-202ENST00000448469 2270 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
LRCH3Q96II8 GABARAPL1-218ENST00000546017 2294 ntTSL 2 BASIC14.98□□□□□ -0.01
LRCH3Q96II8 AL365205.1-204ENST00000359201 2098 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
LRCH3Q96II8 LHFPL1-201ENST00000371968 1675 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
LRCH3Q96II8 ANKRD50-202ENST00000515641 4212 ntTSL 2 BASIC14.98□□□□□ -0.01
LRCH3Q96II8 CTLA4-201ENST00000295854 525 ntTSL 5 BASIC14.98□□□□□ -0.01
LRCH3Q96II8 AL591499.1-201ENST00000307155 1153 ntBASIC14.98□□□□□ -0.01
LRCH3Q96II8 SULT1A3-201ENST00000338971 1097 ntAPPRIS P2 TSL 1 (best) BASIC14.98□□□□□ -0.01
LRCH3Q96II8 CD8B-202ENST00000349455 849 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
LRCH3Q96II8 PHBP10-201ENST00000416467 784 ntBASIC14.98□□□□□ -0.01
LRCH3Q96II8 AL392088.1-201ENST00000428364 670 ntBASIC14.98□□□□□ -0.01
LRCH3Q96II8 ALMS1P1-201ENST00000428767 921 ntBASIC14.98□□□□□ -0.01
LRCH3Q96II8 AC069257.3-201ENST00000431391 708 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
LRCH3Q96II8 RPSAP69-201ENST00000445739 546 ntTSL 4 BASIC14.98□□□□□ -0.01
LRCH3Q96II8 SRP9P1-201ENST00000445874 261 ntBASIC14.98□□□□□ -0.01
LRCH3Q96II8 HNRNPA1P73-201ENST00000446472 928 ntBASIC14.98□□□□□ -0.01
LRCH3Q96II8 AL157823.2-201ENST00000452048 669 ntTSL 3 BASIC14.98□□□□□ -0.01
LRCH3Q96II8 AC139887.2-201ENST00000503571 531 ntTSL 4 BASIC14.98□□□□□ -0.01
LRCH3Q96II8 LINC02507-201ENST00000509370 1028 ntTSL 3 BASIC14.98□□□□□ -0.01
LRCH3Q96II8 FAM213AP2-201ENST00000521579 683 ntBASIC14.98□□□□□ -0.01
LRCH3Q96II8 TSPAN9-IT1-201ENST00000539784 562 ntTSL 4 BASIC14.98□□□□□ -0.01
LRCH3Q96II8 BCL2L2-PABPN1-201ENST00000553781 1241 ntAPPRIS P1 TSL 2 BASIC14.98□□□□□ -0.01
LRCH3Q96II8 CYB5D2-202ENST00000573984 495 ntTSL 4 BASIC14.98□□□□□ -0.01
LRCH3Q96II8 AC006504.5-210ENST00000585827 539 ntTSL 4 BASIC14.98□□□□□ -0.01
LRCH3Q96II8 TUBB4A-207ENST00000596926 548 ntTSL 4 BASIC14.98□□□□□ -0.01
LRCH3Q96II8 PDZRN3-AS1-203ENST00000608743 780 ntTSL 5 BASIC14.98□□□□□ -0.01
LRCH3Q96II8 ITGB2-AS1-204ENST00000609592 482 ntTSL 5 BASIC14.98□□□□□ -0.01
LRCH3Q96II8 AC241585.2-202ENST00000621798 1015 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
LRCH3Q96II8 SNHG5-213ENST00000622963 753 ntTSL 5 BASIC14.98□□□□□ -0.01
LRCH3Q96II8 AC010335.3-201ENST00000623767 531 ntBASIC14.98□□□□□ -0.01
LRCH3Q96II8 FYN-202ENST00000354650 3628 ntAPPRIS P4 TSL 1 (best) BASIC14.98□□□□□ -0.01
LRCH3Q96II8 CAPN7-201ENST00000253693 4353 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
LRCH3Q96II8 IL21R-AS1-201ENST00000563191 2615 ntTSL 2 BASIC14.98□□□□□ -0.01
LRCH3Q96II8 SEMA5B-201ENST00000195173 4523 ntAPPRIS ALT2 TSL 5 BASIC14.98□□□□□ -0.01
LRCH3Q96II8 YPEL1-201ENST00000339468 4329 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
LRCH3Q96II8 SBF1-201ENST00000348911 6045 ntAPPRIS ALT2 TSL 5 BASIC14.98□□□□□ -0.01
LRCH3Q96II8 ZC3H8-201ENST00000272570 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
LRCH3Q96II8 BARX1-AS1-201ENST00000453045 1445 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
LRCH3Q96II8 LINC02347-203ENST00000540774 1442 ntTSL 5 BASIC14.98□□□□□ -0.01
LRCH3Q96II8 TMEM127-201ENST00000258439 6266 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
LRCH3Q96II8 CIT-219ENST00000612548 1799 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
LRCH3Q96II8 BCL2L11-219ENST00000619294 5132 ntTSL 5 BASIC14.98□□□□□ -0.01
LRCH3Q96II8 SEPT8-206ENST00000378706 4168 ntAPPRIS ALT1 TSL 5 BASIC14.98□□□□□ -0.01
LRCH3Q96II8 DUS2-201ENST00000358896 1933 ntAPPRIS P1 TSL 2 BASIC14.98□□□□□ -0.01
LRCH3Q96II8 SAFB2-201ENST00000252542 3371 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
LRCH3Q96II8 WDR25-204ENST00000554175 2055 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
LRCH3Q96II8 BBS2-201ENST00000245157 2963 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
LRCH3Q96II8 ERO1B-202ENST00000354619 4567 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
LRCH3Q96II8 KCNT1-208ENST00000488444 3696 ntAPPRIS ALT2 TSL 5 BASIC14.97□□□□□ -0.01
LRCH3Q96II8 PGD-201ENST00000270776 1885 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
LRCH3Q96II8 CYP26A1-202ENST00000371531 2245 ntTSL 2 BASIC14.97□□□□□ -0.01
LRCH3Q96II8 PITPNB-202ENST00000335272 2926 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
LRCH3Q96II8 ZFPM2-206ENST00000520492 3960 ntTSL 2 BASIC14.97□□□□□ -0.01
LRCH3Q96II8 ATP6V1H-202ENST00000359530 2007 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
LRCH3Q96II8 ARHGEF3-212ENST00000495373 2024 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
LRCH3Q96II8 APCDD1L-201ENST00000371149 3426 ntAPPRIS P2 TSL 1 (best) BASIC14.97□□□□□ -0.01
LRCH3Q96II8 PPP2R5C-204ENST00000422945 4481 ntTSL 2 BASIC14.97□□□□□ -0.01
LRCH3Q96II8 PPP1R12A-AS1-201ENST00000552885 3234 ntTSL 3 BASIC14.97□□□□□ -0.01
LRCH3Q96II8 SLC26A11-201ENST00000361193 2885 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
LRCH3Q96II8 WNT8A-202ENST00000398754 1498 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
LRCH3Q96II8 LAP3P2-201ENST00000454686 1454 ntBASIC14.97□□□□□ -0.01
LRCH3Q96II8 USP35-203ENST00000529308 4216 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
LRCH3Q96II8 CHEK2-204ENST00000382580 1971 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
LRCH3Q96II8 AC004223.3-201ENST00000593039 1638 ntAPPRIS P5 TSL 2 BASIC14.97□□□□□ -0.01
LRCH3Q96II8 VPS28-201ENST00000292510 979 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 47.5 ms