Protein–RNA interactions for Protein: P78396

CCNA1, Cyclin-A1, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNA1P78396 ZNF280D-207ENST00000559237 4902 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
CCNA1P78396 SCFD2-201ENST00000388940 2221 ntTSL 2 BASIC15.62■□□□□ 0.09
CCNA1P78396 PPP3CB-201ENST00000342558 2418 ntTSL 5 BASIC15.62■□□□□ 0.09
CCNA1P78396 KIF7-201ENST00000394412 4551 ntAPPRIS P1 TSL 5 BASIC15.62■□□□□ 0.09
CCNA1P78396 ITPK1-207ENST00000555495 3035 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
CCNA1P78396 TRPM3-205ENST00000361823 1260 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
CCNA1P78396 IGLJ1-201ENST00000390320 127 ntAPPRIS P1 BASIC15.62■□□□□ 0.09
CCNA1P78396 ELFN1-AS1-201ENST00000415399 636 ntTSL 5 BASIC15.62■□□□□ 0.09
CCNA1P78396 HDAC2-AS2-203ENST00000436876 591 ntTSL 5 BASIC15.62■□□□□ 0.09
CCNA1P78396 HNRNPA1P10-201ENST00000444945 962 ntBASIC15.62■□□□□ 0.09
CCNA1P78396 AC022182.2-201ENST00000525556 859 ntTSL 2 BASIC15.62■□□□□ 0.09
CCNA1P78396 AC004923.3-201ENST00000527532 355 ntBASIC15.62■□□□□ 0.09
CCNA1P78396 AIPL1-210ENST00000576307 1077 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
CCNA1P78396 RN7SL480P-201ENST00000581481 294 ntBASIC15.62■□□□□ 0.09
CCNA1P78396 RBFOX3-206ENST00000582043 1143 ntTSL 5 BASIC15.62■□□□□ 0.09
CCNA1P78396 AC005786.2-201ENST00000592368 369 ntTSL 3 BASIC15.62■□□□□ 0.09
CCNA1P78396 AL591424.3-201ENST00000614278 872 ntBASIC15.62■□□□□ 0.09
CCNA1P78396 CKMT2-203ENST00000437669 1479 ntAPPRIS P1 TSL 5 BASIC15.62■□□□□ 0.09
CCNA1P78396 PRF1-201ENST00000373209 2492 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
CCNA1P78396 MED29-204ENST00000599213 2490 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
CCNA1P78396 PBX3-203ENST00000373487 2902 ntTSL 5 BASIC15.62■□□□□ 0.09
CCNA1P78396 MAGED4B-202ENST00000360134 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
CCNA1P78396 SLC25A38-201ENST00000273158 2123 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
CCNA1P78396 PRKACB-205ENST00000370688 1905 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
CCNA1P78396 RTFDC1-201ENST00000023939 1745 ntTSL 2 BASIC15.62■□□□□ 0.09
CCNA1P78396 AL590132.1-202ENST00000638983 4184 ntTSL 5 BASIC15.62■□□□□ 0.09
CCNA1P78396 GPR45-201ENST00000258456 1307 ntAPPRIS P1 BASIC15.62■□□□□ 0.09
CCNA1P78396 ASCC3-207ENST00000522650 2828 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
CCNA1P78396 Z98885.2-201ENST00000565177 1567 ntTSL 2 BASIC15.62■□□□□ 0.09
CCNA1P78396 SORCS1-201ENST00000263054 7272 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
CCNA1P78396 CHIT1-202ENST00000367229 2246 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
CCNA1P78396 AL390755.1-201ENST00000623716 2027 ntBASIC15.61■□□□□ 0.09
CCNA1P78396 MYBBP1A-201ENST00000254718 4807 ntAPPRIS P3 TSL 1 (best) BASIC15.61■□□□□ 0.09
CCNA1P78396 AC012313.3-202ENST00000599109 3322 ntTSL 5 BASIC15.61■□□□□ 0.09
CCNA1P78396 HOXA-AS2-202ENST00000517635 2455 ntTSL 2 BASIC15.61■□□□□ 0.09
CCNA1P78396 APAF1-203ENST00000359972 7029 ntAPPRIS ALT1 TSL 1 (best) BASIC15.61■□□□□ 0.09
CCNA1P78396 TGM6-201ENST00000202625 2292 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
CCNA1P78396 CASP8-212ENST00000432109 1629 ntAPPRIS P4 TSL 5 BASIC15.61■□□□□ 0.09
CCNA1P78396 KCNIP2-203ENST00000348850 2089 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
CCNA1P78396 AL365205.1-204ENST00000359201 2098 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
CCNA1P78396 SCLT1-208ENST00000506368 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
CCNA1P78396 ZNRF4-201ENST00000222033 1426 ntAPPRIS P1 BASIC15.61■□□□□ 0.09
CCNA1P78396 PCYOX1-201ENST00000264441 2959 ntTSL 5 BASIC15.61■□□□□ 0.09
CCNA1P78396 GPER1-201ENST00000297469 2778 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
CCNA1P78396 ATRN-202ENST00000446916 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
CCNA1P78396 CYB5D2-201ENST00000301391 1910 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
CCNA1P78396 OS9-207ENST00000439210 1946 ntTSL 2 BASIC15.61■□□□□ 0.09
CCNA1P78396 XPO7-201ENST00000252512 4861 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
CCNA1P78396 RCC2P5-201ENST00000492126 1487 ntBASIC15.61■□□□□ 0.09
CCNA1P78396 FAM110C-201ENST00000327669 3760 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
CCNA1P78396 MAGEC3-205ENST00000544766 1707 ntAPPRIS ALT2 TSL 5 BASIC15.61■□□□□ 0.09
CCNA1P78396 MIR632-201ENST00000385193 94 ntBASIC15.61■□□□□ 0.09
CCNA1P78396 AL359092.2-201ENST00000423330 585 ntBASIC15.61■□□□□ 0.09
CCNA1P78396 FRGCA-201ENST00000424933 422 ntTSL 3 BASIC15.61■□□□□ 0.09
CCNA1P78396 AC019118.1-201ENST00000454530 435 ntTSL 3 BASIC15.61■□□□□ 0.09
CCNA1P78396 SMAD1-AS1-201ENST00000513542 481 ntTSL 2 BASIC15.61■□□□□ 0.09
CCNA1P78396 IGHEP1-201ENST00000521393 651 ntBASIC15.61■□□□□ 0.09
CCNA1P78396 RBM4-211ENST00000530235 1011 ntTSL 3 BASIC15.61■□□□□ 0.09
CCNA1P78396 AC007298.2-201ENST00000551849 862 ntTSL 3 BASIC15.61■□□□□ 0.09
CCNA1P78396 SNRPF-204ENST00000552085 815 ntTSL 3 BASIC15.61■□□□□ 0.09
CCNA1P78396 AC068152.1-205ENST00000575173 1081 ntTSL 3 BASIC15.61■□□□□ 0.09
CCNA1P78396 MIR5091-201ENST00000578707 93 ntBASIC15.61■□□□□ 0.09
CCNA1P78396 AC068675.1-201ENST00000588996 561 ntTSL 4 BASIC15.61■□□□□ 0.09
CCNA1P78396 AC004686.1-201ENST00000605113 538 ntBASIC15.61■□□□□ 0.09
CCNA1P78396 DNAJC10-211ENST00000640034 888 ntTSL 5 BASIC15.61■□□□□ 0.09
CCNA1P78396 DLGAP1-204ENST00000400149 5203 ntTSL 5 BASIC15.61■□□□□ 0.09
CCNA1P78396 MBD1-222ENST00000590208 2913 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
CCNA1P78396 HTD2-205ENST00000477305 1531 ntAPPRIS P1 TSL 5 BASIC15.61■□□□□ 0.09
CCNA1P78396 COQ8A-203ENST00000366779 5523 ntAPPRIS P1 TSL 2 BASIC15.61■□□□□ 0.09
CCNA1P78396 COMP-201ENST00000222271 2461 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
CCNA1P78396 ETNPPL-202ENST00000411864 2028 ntAPPRIS ALT1 TSL 1 (best) BASIC15.61■□□□□ 0.09
CCNA1P78396 TRIT1-214ENST00000537440 2026 ntTSL 5 BASIC15.61■□□□□ 0.09
CCNA1P78396 PRMT2-216ENST00000621201 1301 ntTSL 5 BASIC15.61■□□□□ 0.09
CCNA1P78396 RUNX1T1-251ENST00000615601 7372 ntAPPRIS ALT1 TSL 5 BASIC15.61■□□□□ 0.09
CCNA1P78396 CCNB2-201ENST00000288207 1556 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
CCNA1P78396 DKFZP434A062-201ENST00000573103 5021 ntBASIC15.61■□□□□ 0.09
CCNA1P78396 PNPLA6-201ENST00000221249 4617 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
CCNA1P78396 WNT16-201ENST00000222462 3147 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
CCNA1P78396 ARHGAP45-206ENST00000586866 4120 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
CCNA1P78396 GDF11-201ENST00000257868 8657 ntAPPRIS P2 TSL 1 (best) BASIC15.61■□□□□ 0.09
CCNA1P78396 REPIN1-209ENST00000479668 3182 ntTSL 2 BASIC15.61■□□□□ 0.09
CCNA1P78396 PHF2-203ENST00000610682 2921 ntTSL 5 BASIC15.61■□□□□ 0.09
CCNA1P78396 AC020763.3-201ENST00000625095 2904 ntBASIC15.61■□□□□ 0.09
CCNA1P78396 NUP133-201ENST00000261396 5207 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
CCNA1P78396 TRMT1-201ENST00000221504 2179 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
CCNA1P78396 MEGF10-202ENST00000418761 2238 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
CCNA1P78396 HTR7-201ENST00000277874 3028 ntAPPRIS P4 TSL 1 (best) BASIC15.6■□□□□ 0.09
CCNA1P78396 UNC5A-201ENST00000329542 3812 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
CCNA1P78396 TRIB2-201ENST00000155926 4391 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
CCNA1P78396 ABCC6-208ENST00000622290 4941 ntTSL 5 BASIC15.6■□□□□ 0.09
CCNA1P78396 EP400-203ENST00000333577 3092 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
CCNA1P78396 TPD52L2-206ENST00000358548 2275 ntTSL 2 BASIC15.6■□□□□ 0.09
CCNA1P78396 UBE2V1-222ENST00000557021 2258 ntTSL 5 BASIC15.6■□□□□ 0.09
CCNA1P78396 PAX5-204ENST00000377852 1472 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
CCNA1P78396 ZNF354B-201ENST00000322434 2802 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
CCNA1P78396 SERPING1-201ENST00000278407 2002 ntAPPRIS P2 TSL 1 (best) BASIC15.6■□□□□ 0.09
CCNA1P78396 MFRP-205ENST00000619721 3917 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
CCNA1P78396 AP1S3-206ENST00000443700 1785 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
CCNA1P78396 DDX56-201ENST00000258772 2336 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
CCNA1P78396 GP1BA-202ENST00000611961 2339 ntAPPRIS ALT2 TSL 5 BASIC15.6■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 84.3 ms