Protein–RNA interactions for Protein: P35606

COPB2, Coatomer subunit beta', humanhuman

Predictions only

Length 906 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPB2P35606 TGFB3-204ENST00000556285 1280 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
COPB2P35606 FAM187B2P-201ENST00000577135 713 ntBASIC15.82■□□□□ 0.12
COPB2P35606 RNF103-CHMP3-202ENST00000604011 1135 ntAPPRIS P1 TSL 2 BASIC15.82■□□□□ 0.12
COPB2P35606 AL451165.2-201ENST00000606971 718 ntTSL 2 BASIC15.82■□□□□ 0.12
COPB2P35606 AC090004.1-201ENST00000608606 653 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
COPB2P35606 TMEM211-203ENST00000640159 1122 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
COPB2P35606 WDR77-201ENST00000235090 2576 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
COPB2P35606 ALOX15-201ENST00000293761 2677 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
COPB2P35606 WNT9B-202ENST00000393461 2654 ntTSL 2 BASIC15.82■□□□□ 0.12
COPB2P35606 SPRY2-201ENST00000377102 2708 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
COPB2P35606 GGACT-201ENST00000376250 2804 ntAPPRIS P1 TSL 3 BASIC15.82■□□□□ 0.12
COPB2P35606 SCAMP1-AS1-201ENST00000421004 1479 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
COPB2P35606 SELENBP1-208ENST00000447402 1530 ntTSL 2 BASIC15.82■□□□□ 0.12
COPB2P35606 AC109583.3-201ENST00000641183 3128 ntAPPRIS P1 BASIC15.82■□□□□ 0.12
COPB2P35606 E2F3-201ENST00000346618 4749 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
COPB2P35606 NRADDP-202ENST00000641269 1585 ntBASIC15.82■□□□□ 0.12
COPB2P35606 IZUMO1-201ENST00000332955 1621 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
COPB2P35606 CNBP-203ENST00000446936 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC15.82■□□□□ 0.12
COPB2P35606 CNBP-204ENST00000451728 1641 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
COPB2P35606 CHRNA2-201ENST00000240132 1735 ntAPPRIS ALT2 TSL 2 BASIC15.82■□□□□ 0.12
COPB2P35606 TPPP3-205ENST00000564104 1736 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
COPB2P35606 EVL-201ENST00000392920 1978 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
COPB2P35606 FGGY-204ENST00000371218 2052 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
COPB2P35606 SERPINE3-204ENST00000524365 2293 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
COPB2P35606 HNRNPH3-201ENST00000265866 2339 ntAPPRIS P4 TSL 1 (best) BASIC15.82■□□□□ 0.12
COPB2P35606 RTEL1-201ENST00000318100 4676 ntTSL 2 BASIC15.82■□□□□ 0.12
COPB2P35606 TMEM181-201ENST00000367090 5390 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
COPB2P35606 GIT1-211ENST00000581348 2827 ntAPPRIS ALT2 TSL 2 BASIC15.81■□□□□ 0.12
COPB2P35606 TFR2-201ENST00000223051 2888 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
COPB2P35606 KCNMA1-202ENST00000286628 6233 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
COPB2P35606 LRIG3-201ENST00000320743 4070 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
COPB2P35606 TBC1D16-209ENST00000576768 6342 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
COPB2P35606 TNNI2-201ENST00000252898 678 ntAPPRIS P3 TSL 3 BASIC15.81■□□□□ 0.12
COPB2P35606 TNNT3-201ENST00000278317 1210 ntAPPRIS P3 TSL 5 BASIC15.81■□□□□ 0.12
COPB2P35606 C11orf53-201ENST00000280325 1208 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
COPB2P35606 PTGER4P2-201ENST00000328411 252 ntBASIC15.81■□□□□ 0.12
COPB2P35606 CSF1-201ENST00000329608 4210 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
COPB2P35606 THBS4-201ENST00000350881 3222 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
COPB2P35606 PRKN-204ENST00000366896 2514 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
COPB2P35606 TSC22D3-202ENST00000372382 1216 ntTSL 3 BASIC15.81■□□□□ 0.12
COPB2P35606 WFDC5-202ENST00000372789 1018 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
COPB2P35606 TNNT3-207ENST00000381589 1060 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
COPB2P35606 CASP8-206ENST00000392258 1060 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
COPB2P35606 RBM4-203ENST00000398692 921 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
COPB2P35606 SNU13-204ENST00000402458 462 ntTSL 3 BASIC15.81■□□□□ 0.12
COPB2P35606 ARFIP1-203ENST00000405727 1601 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
COPB2P35606 AF274858.1-201ENST00000406288 372 ntBASIC15.81■□□□□ 0.12
COPB2P35606 AL354892.2-201ENST00000413088 403 ntTSL 5 BASIC15.81■□□□□ 0.12
COPB2P35606 AC099567.1-201ENST00000414418 931 ntTSL 5 BASIC15.81■□□□□ 0.12
COPB2P35606 AC116609.2-201ENST00000431542 256 ntTSL 5 BASIC15.81■□□□□ 0.12
COPB2P35606 AL121787.1-202ENST00000445838 876 ntTSL 5 BASIC15.81■□□□□ 0.12
COPB2P35606 AL445471.1-201ENST00000456316 820 ntTSL 5 BASIC15.81■□□□□ 0.12
COPB2P35606 AF013593.1-201ENST00000458074 1487 ntBASIC15.81■□□□□ 0.12
COPB2P35606 PTGER4P3-201ENST00000458150 252 ntBASIC15.81■□□□□ 0.12
COPB2P35606 CPA5-206ENST00000474905 1940 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
COPB2P35606 RBM4-207ENST00000506523 654 ntTSL 3 BASIC15.81■□□□□ 0.12
COPB2P35606 MEF2C-AS2-201ENST00000510274 463 ntTSL 5 BASIC15.81■□□□□ 0.12
COPB2P35606 AC008620.2-201ENST00000510294 1569 ntBASIC15.81■□□□□ 0.12
COPB2P35606 RMDN1-218ENST00000523911 950 ntTSL 2 BASIC15.81■□□□□ 0.12
COPB2P35606 TPRX1-202ENST00000535759 2059 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
COPB2P35606 AC011462.1-202ENST00000540732 1960 ntAPPRIS P1 TSL 2 BASIC15.81■□□□□ 0.12
COPB2P35606 VASH1-AS1-202ENST00000556072 1684 ntTSL 2 BASIC15.81■□□□□ 0.12
COPB2P35606 ABHD17AP9-201ENST00000561925 548 ntBASIC15.81■□□□□ 0.12
COPB2P35606 AC009065.6-201ENST00000568795 456 ntTSL 2 BASIC15.81■□□□□ 0.12
COPB2P35606 AC018761.2-201ENST00000585496 296 ntTSL 3 BASIC15.81■□□□□ 0.12
COPB2P35606 AC004528.1-201ENST00000588380 641 ntTSL 5 BASIC15.81■□□□□ 0.12
COPB2P35606 ZNF737-204ENST00000596797 569 ntTSL 4 BASIC15.81■□□□□ 0.12
COPB2P35606 URAHP-205ENST00000610227 398 ntBASIC15.81■□□□□ 0.12
COPB2P35606 ZFAND6-222ENST00000613266 1729 ntAPPRIS P1 TSL 3 BASIC15.81■□□□□ 0.12
COPB2P35606 Z98885.3-201ENST00000624882 1757 ntBASIC15.81■□□□□ 0.12
COPB2P35606 ZNF70-201ENST00000341976 6924 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
COPB2P35606 PELP1-212ENST00000574876 3465 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
COPB2P35606 ATP6V0A1-203ENST00000393829 3028 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
COPB2P35606 DUSP18-204ENST00000403268 2920 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
COPB2P35606 ADAMTS15-201ENST00000299164 5673 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
COPB2P35606 PID1-202ENST00000392054 2745 ntTSL 2 BASIC15.81■□□□□ 0.12
COPB2P35606 ZKSCAN4-201ENST00000377294 2375 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
COPB2P35606 SLC25A18-201ENST00000327451 2244 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
COPB2P35606 PTGES3-207ENST00000614328 2077 ntTSL 3 BASIC15.8■□□□□ 0.12
COPB2P35606 GCLC-201ENST00000229416 3813 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
COPB2P35606 KBTBD12-202ENST00000405109 5727 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
COPB2P35606 GLIPR1L2-201ENST00000320460 1729 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
COPB2P35606 HSDL2-202ENST00000398805 3350 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
COPB2P35606 ACTL8-202ENST00000617065 1670 ntAPPRIS P1 TSL 2 BASIC15.8■□□□□ 0.12
COPB2P35606 OPA1-204ENST00000361828 6381 ntAPPRIS ALT1 TSL 5 BASIC15.8■□□□□ 0.12
COPB2P35606 VSIR-201ENST00000394957 4689 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
COPB2P35606 MINDY1-205ENST00000493834 1546 ntTSL 2 BASIC15.8■□□□□ 0.12
COPB2P35606 KCNMA1-262ENST00000639489 4302 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
COPB2P35606 RET-201ENST00000340058 4149 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
COPB2P35606 AC020915.4-201ENST00000597230 2708 ntTSL 2 BASIC15.8■□□□□ 0.12
COPB2P35606 HIST1H2AE-201ENST00000303910 509 ntAPPRIS P1 BASIC15.8■□□□□ 0.12
COPB2P35606 DHRS7C-201ENST00000330255 1006 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
COPB2P35606 RPL10-202ENST00000369817 1284 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
COPB2P35606 PLAC9P1-201ENST00000397540 389 ntTSL 2 BASIC15.8■□□□□ 0.12
COPB2P35606 AL359853.1-202ENST00000415218 544 ntTSL 2 BASIC15.8■□□□□ 0.12
COPB2P35606 AL929302.1-201ENST00000426556 871 ntBASIC15.8■□□□□ 0.12
COPB2P35606 HNRNPA1P2-207ENST00000432375 960 ntBASIC15.8■□□□□ 0.12
COPB2P35606 AC093609.1-201ENST00000434020 952 ntTSL 2 BASIC15.8■□□□□ 0.12
COPB2P35606 APCDD1L-AS1-206ENST00000445984 566 ntTSL 3 BASIC15.8■□□□□ 0.12
COPB2P35606 APCDD1L-AS1-208ENST00000448374 546 ntTSL 4 BASIC15.8■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 57.9 ms