Protein–RNA interactions for Protein: P18074

ERCC2, TFIIH basal transcription factor complex helicase XPD subunit, humanhuman

Predictions only

Length 760 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC2P18074 SNAP29-201ENST00000215730 4287 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
ERCC2P18074 AC239798.2-201ENST00000415338 3540 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
ERCC2P18074 CCNE2-201ENST00000308108 2724 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
ERCC2P18074 DMTN-220ENST00000523266 2735 ntTSL 5 BASIC14.29□□□□□ -0.12
ERCC2P18074 DAB1-207ENST00000420954 1817 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
ERCC2P18074 SLC6A10P-201ENST00000330048 3846 ntTSL 2 BASIC14.29□□□□□ -0.12
ERCC2P18074 OTUD4-201ENST00000447906 3829 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
ERCC2P18074 TMCC3-201ENST00000261226 5877 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
ERCC2P18074 EDN1-201ENST00000379375 2033 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
ERCC2P18074 UGP2-207ENST00000467648 2057 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
ERCC2P18074 ARAP3-201ENST00000239440 5250 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
ERCC2P18074 ADAMTSL4-201ENST00000271643 4250 ntAPPRIS P3 TSL 5 BASIC14.29□□□□□ -0.12
ERCC2P18074 CRISPLD2-209ENST00000567845 2178 ntAPPRIS ALT1 TSL 5 BASIC14.29□□□□□ -0.12
ERCC2P18074 ARRB1-202ENST00000420843 3336 ntAPPRIS ALT1 TSL 1 (best) BASIC14.29□□□□□ -0.12
ERCC2P18074 OPN4-201ENST00000241891 2308 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
ERCC2P18074 AC244021.1-201ENST00000417218 3662 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
ERCC2P18074 CCT6P3-201ENST00000419314 3702 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
ERCC2P18074 ANO9-201ENST00000332826 2542 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
ERCC2P18074 CES3-201ENST00000303334 3834 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
ERCC2P18074 PYY2-201ENST00000315776 282 ntBASIC14.29□□□□□ -0.12
ERCC2P18074 CMC4-201ENST00000369479 864 ntAPPRIS P1 TSL 3 BASIC14.29□□□□□ -0.12
ERCC2P18074 CES3-202ENST00000394037 3817 ntAPPRIS ALT1 TSL 1 (best) BASIC14.29□□□□□ -0.12
ERCC2P18074 AC007952.1-202ENST00000399083 1173 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
ERCC2P18074 RPL3P2-204ENST00000413027 1203 ntBASIC14.29□□□□□ -0.12
ERCC2P18074 DCAF7-201ENST00000415273 1220 ntTSL 2 BASIC14.29□□□□□ -0.12
ERCC2P18074 AL391832.2-201ENST00000418557 889 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
ERCC2P18074 AL512306.1-201ENST00000432698 848 ntBASIC14.29□□□□□ -0.12
ERCC2P18074 AC092573.1-201ENST00000433054 884 ntBASIC14.29□□□□□ -0.12
ERCC2P18074 AC018638.5-201ENST00000450885 754 ntBASIC14.29□□□□□ -0.12
ERCC2P18074 AC022494.1-201ENST00000466044 728 ntBASIC14.29□□□□□ -0.12
ERCC2P18074 TRBC2-201ENST00000466254 758 ntAPPRIS P1 BASIC14.29□□□□□ -0.12
ERCC2P18074 AC129102.1-201ENST00000535755 525 ntTSL 4 BASIC14.29□□□□□ -0.12
ERCC2P18074 ALG10B-203ENST00000551464 571 ntTSL 3 BASIC14.29□□□□□ -0.12
ERCC2P18074 LGALS3-204ENST00000554715 916 ntTSL 3 BASIC14.29□□□□□ -0.12
ERCC2P18074 MIR4326-201ENST00000582203 59 ntBASIC14.29□□□□□ -0.12
ERCC2P18074 SNRPA1-216ENST00000626000 539 ntTSL 5 BASIC14.29□□□□□ -0.12
ERCC2P18074 AC106017.2-201ENST00000631194 1173 ntTSL 2 BASIC14.29□□□□□ -0.12
ERCC2P18074 SGK1-205ENST00000413996 2686 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
ERCC2P18074 MCRIP1-207ENST00000574190 2775 ntAPPRIS P1 TSL 2 BASIC14.29□□□□□ -0.12
ERCC2P18074 DYNC1I1-202ENST00000359388 2843 ntAPPRIS ALT1 TSL 1 (best) BASIC14.29□□□□□ -0.12
ERCC2P18074 APOL5-201ENST00000249044 1438 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
ERCC2P18074 SEC13-202ENST00000350697 1425 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
ERCC2P18074 TMEM231-207ENST00000568377 2920 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
ERCC2P18074 OSBPL8-203ENST00000393250 3157 ntAPPRIS ALT1 TSL 5 BASIC14.29□□□□□ -0.12
ERCC2P18074 UBE3C-202ENST00000389103 1626 ntTSL 5 BASIC14.29□□□□□ -0.12
ERCC2P18074 FTSJ1-203ENST00000396894 1669 ntTSL 2 BASIC14.29□□□□□ -0.12
ERCC2P18074 ARMC5-205ENST00000563544 3549 ntAPPRIS ALT2 TSL 2 BASIC14.29□□□□□ -0.12
ERCC2P18074 NT5DC4-201ENST00000327581 1767 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
ERCC2P18074 AC019109.1-201ENST00000401725 1874 ntBASIC14.29□□□□□ -0.12
ERCC2P18074 CCT2-201ENST00000299300 2041 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
ERCC2P18074 AC068987.4-201ENST00000562343 2094 ntTSL 5 BASIC14.29□□□□□ -0.12
ERCC2P18074 DISC1-222ENST00000622252 6927 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
ERCC2P18074 RAPH1-202ENST00000319170 9808 ntAPPRIS P4 TSL 1 (best) BASIC14.29□□□□□ -0.12
ERCC2P18074 C20orf203-202ENST00000608990 5076 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
ERCC2P18074 PNKD-203ENST00000273077 3021 ntAPPRIS P4 TSL 1 (best) BASIC14.28□□□□□ -0.12
ERCC2P18074 ZDHHC8-203ENST00000405930 3112 ntTSL 2 BASIC14.28□□□□□ -0.12
ERCC2P18074 AGRN-201ENST00000379370 7323 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
ERCC2P18074 AP3M2-207ENST00000518421 3669 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
ERCC2P18074 TAPBP-234ENST00000434618 3759 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
ERCC2P18074 CALR3-201ENST00000269881 1292 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
ERCC2P18074 KLK6-201ENST00000310157 1511 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
ERCC2P18074 TESPA1-201ENST00000316577 1898 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
ERCC2P18074 ACTL7A-201ENST00000333999 1494 ntAPPRIS P1 BASIC14.28□□□□□ -0.12
ERCC2P18074 LARP7-202ENST00000344442 2286 ntAPPRIS P1 TSL 2 BASIC14.28□□□□□ -0.12
ERCC2P18074 G3BP2-202ENST00000359707 4883 ntAPPRIS P4 TSL 1 (best) BASIC14.28□□□□□ -0.12
ERCC2P18074 CATSPERE-203ENST00000366534 3333 ntAPPRIS ALT2 TSL 2 BASIC14.28□□□□□ -0.12
ERCC2P18074 TPM3-211ENST00000368531 1115 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
ERCC2P18074 NDUFB6-203ENST00000379847 1366 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
ERCC2P18074 BIN3-202ENST00000399977 1340 ntTSL 2 BASIC14.28□□□□□ -0.12
ERCC2P18074 RANGRF-202ENST00000407006 1074 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
ERCC2P18074 MIR1307-201ENST00000408840 149 ntBASIC14.28□□□□□ -0.12
ERCC2P18074 PPP2R1B-204ENST00000426998 1888 ntAPPRIS ALT2 TSL 2 BASIC14.28□□□□□ -0.12
ERCC2P18074 RFX8-201ENST00000428343 1686 ntAPPRIS P1 TSL 2 BASIC14.28□□□□□ -0.12
ERCC2P18074 PRKCZ-AS1-202ENST00000444529 622 ntTSL 3 BASIC14.28□□□□□ -0.12
ERCC2P18074 GRPEL2P1-201ENST00000453145 339 ntBASIC14.28□□□□□ -0.12
ERCC2P18074 UPF3AP2-201ENST00000457924 1132 ntBASIC14.28□□□□□ -0.12
ERCC2P18074 NME7-203ENST00000472647 1590 ntAPPRIS ALT2 TSL 2 BASIC14.28□□□□□ -0.12
ERCC2P18074 TPI1-206ENST00000488464 791 ntTSL 5 BASIC14.28□□□□□ -0.12
ERCC2P18074 SIRT3-210ENST00000529382 1225 ntTSL 2 BASIC14.28□□□□□ -0.12
ERCC2P18074 EPB42-203ENST00000540029 2098 ntTSL 2 BASIC14.28□□□□□ -0.12
ERCC2P18074 FAM104A-206ENST00000583024 417 ntTSL 3 BASIC14.28□□□□□ -0.12
ERCC2P18074 KLKP1-203ENST00000600104 1532 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
ERCC2P18074 PPT1-213ENST00000641319 2388 ntBASIC14.28□□□□□ -0.12
ERCC2P18074 KDM5B-202ENST00000367264 6449 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
ERCC2P18074 AKAP12-204ENST00000402676 8432 ntAPPRIS P4 TSL 5 BASIC14.28□□□□□ -0.12
ERCC2P18074 RNF145-202ENST00000424310 3613 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
ERCC2P18074 FHDC1-202ENST00000511601 6583 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
ERCC2P18074 AC114689.3-201ENST00000583687 2991 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
ERCC2P18074 USH1C-201ENST00000005226 2700 ntAPPRIS P3 TSL 5 BASIC14.28□□□□□ -0.12
ERCC2P18074 GDAP2-201ENST00000369442 2436 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
ERCC2P18074 GDPD5-215ENST00000533805 2424 ntTSL 2 BASIC14.27□□□□□ -0.12
ERCC2P18074 SPG11-210ENST00000558319 6426 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.12
ERCC2P18074 SREBF1-202ENST00000355815 4253 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
ERCC2P18074 ERCC4-207ENST00000575156 2073 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
ERCC2P18074 CPEB1-213ENST00000617462 2068 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
ERCC2P18074 DCAF8L2-203ENST00000545306 2013 ntAPPRIS P1 BASIC14.27□□□□□ -0.12
ERCC2P18074 LILRA1-201ENST00000251372 1910 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
ERCC2P18074 PRKACB-205ENST00000370688 1905 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
ERCC2P18074 SHPK-201ENST00000225519 3838 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
ERCC2P18074 KRT36-202ENST00000393986 1707 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 51.8 ms