Protein–RNA interactions for Protein: P04406

GAPDH, Glyceraldehyde-3-phosphate dehydrogenase, humanhuman

Known RBP Predictions only

Length 335 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GAPDHP04406 LAMB2-201ENST00000305544 5643 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
GAPDHP04406 GMEB1-202ENST00000361872 1894 ntAPPRIS ALT1 TSL 1 (best) BASIC11.71□□□□□ -0.53
GAPDHP04406 CDH8-201ENST00000299345 3728 ntTSL 5 BASIC11.71□□□□□ -0.53
GAPDHP04406 FLNA-201ENST00000344736 7932 ntAPPRIS ALT2 TSL 5 BASIC11.71□□□□□ -0.54
GAPDHP04406 RAB44-202ENST00000612677 4233 ntAPPRIS P2 TSL 5 BASIC11.71□□□□□ -0.54
GAPDHP04406 MYRIP-203ENST00000425621 2981 ntTSL 2 BASIC11.71□□□□□ -0.54
GAPDHP04406 HNF1B-204ENST00000617811 2977 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
GAPDHP04406 SLC37A4-202ENST00000357590 2356 ntTSL 5 BASIC11.71□□□□□ -0.54
GAPDHP04406 DNMT3B-206ENST00000456297 2315 ntTSL 2 BASIC11.71□□□□□ -0.54
GAPDHP04406 AC004899.1-201ENST00000424687 1714 ntBASIC11.71□□□□□ -0.54
GAPDHP04406 ZNF100-201ENST00000305570 2283 ntTSL 1 (best) BASIC11.71□□□□□ -0.54
GAPDHP04406 AP003969.2-201ENST00000623739 2275 ntBASIC11.71□□□□□ -0.54
GAPDHP04406 DPY19L2P2-205ENST00000439473 3994 ntTSL 1 (best) BASIC11.71□□□□□ -0.54
GAPDHP04406 RFFL-201ENST00000315249 7293 ntAPPRIS P1 TSL 2 BASIC11.71□□□□□ -0.54
GAPDHP04406 MAP7D2-204ENST00000452324 2233 ntAPPRIS ALT2 TSL 2 BASIC11.71□□□□□ -0.54
GAPDHP04406 FAM90A11P-201ENST00000518378 2218 ntBASIC11.71□□□□□ -0.54
GAPDHP04406 CDCA3-202ENST00000422785 2760 ntTSL 2 BASIC11.71□□□□□ -0.54
GAPDHP04406 SPAG8-202ENST00000396638 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.54
GAPDHP04406 NOP14-AS1-201ENST00000503709 1616 ntTSL 1 (best) BASIC11.71□□□□□ -0.54
GAPDHP04406 LDLRAD4-203ENST00000399848 8633 ntTSL 1 (best) BASIC11.71□□□□□ -0.54
GAPDHP04406 IKZF1-203ENST00000346667 5376 ntTSL 5 BASIC11.71□□□□□ -0.54
GAPDHP04406 C9orf47-203ENST00000375851 4837 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.54
GAPDHP04406 AL024498.2-201ENST00000480294 1589 ntAPPRIS P1 TSL 2 BASIC11.71□□□□□ -0.54
GAPDHP04406 ENOX1-201ENST00000261488 2982 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
GAPDHP04406 EBF3-201ENST00000355311 2993 ntAPPRIS ALT1 TSL 5 BASIC11.7□□□□□ -0.54
GAPDHP04406 PLA1A-204ENST00000488919 1456 ntTSL 2 BASIC11.7□□□□□ -0.54
GAPDHP04406 FOSB-213ENST00000615753 1468 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
GAPDHP04406 PKP1-203ENST00000367324 5384 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
GAPDHP04406 PLPP6-201ENST00000381883 2944 ntAPPRIS P1 BASIC11.7□□□□□ -0.54
GAPDHP04406 SLC6A9-203ENST00000372306 1926 ntTSL 2 BASIC11.7□□□□□ -0.54
GAPDHP04406 TRAF3-208ENST00000560371 7640 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
GAPDHP04406 NAALADL1-201ENST00000340252 2376 ntTSL 5 BASIC11.7□□□□□ -0.54
GAPDHP04406 CDPF1-203ENST00000404583 1439 ntAPPRIS ALT1 TSL 2 BASIC11.7□□□□□ -0.54
GAPDHP04406 KDM5C-208ENST00000452825 6096 ntAPPRIS ALT2 TSL 5 BASIC11.7□□□□□ -0.54
GAPDHP04406 TNRC18P1-201ENST00000502875 3650 ntBASIC11.7□□□□□ -0.54
GAPDHP04406 TBKBP1-201ENST00000361722 4121 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
GAPDHP04406 AC007666.1-201ENST00000443935 1838 ntTSL 5 BASIC11.7□□□□□ -0.54
GAPDHP04406 POTEB3-201ENST00000611217 1813 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
GAPDHP04406 AC002350.2-201ENST00000623894 1828 ntBASIC11.7□□□□□ -0.54
GAPDHP04406 LINC00511-213ENST00000581549 2265 ntTSL 2 BASIC11.7□□□□□ -0.54
GAPDHP04406 MGAT1-205ENST00000446023 3175 ntAPPRIS P1 TSL 2 BASIC11.7□□□□□ -0.54
GAPDHP04406 LINC01019-201ENST00000505443 3199 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
GAPDHP04406 AC012531.1-201ENST00000562848 2680 ntBASIC11.7□□□□□ -0.54
GAPDHP04406 LRIF1-202ENST00000485275 1796 ntAPPRIS ALT2 TSL 2 BASIC11.7□□□□□ -0.54
GAPDHP04406 HERC5-201ENST00000264350 3513 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
GAPDHP04406 TMEM57-201ENST00000374343 3917 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
GAPDHP04406 IGF2BP1-201ENST00000290341 8274 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
GAPDHP04406 CBX3-203ENST00000409747 1717 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
GAPDHP04406 GALC-201ENST00000261304 3883 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
GAPDHP04406 PSD-202ENST00000406432 3861 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
GAPDHP04406 COL2A1-201ENST00000337299 4257 ntAPPRIS P3 TSL 1 (best) BASIC11.7□□□□□ -0.54
GAPDHP04406 RAB4B-201ENST00000357052 1133 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
GAPDHP04406 UBE4B-203ENST00000377153 1273 ntTSL 3 BASIC11.7□□□□□ -0.54
GAPDHP04406 SMS-201ENST00000379404 1174 ntTSL 3 BASIC11.7□□□□□ -0.54
GAPDHP04406 KRTAP10-13P-201ENST00000412914 571 ntBASIC11.7□□□□□ -0.54
GAPDHP04406 LINC00431-201ENST00000440735 1189 ntTSL 5 BASIC11.7□□□□□ -0.54
GAPDHP04406 LAMA4-209ENST00000453937 645 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
GAPDHP04406 AC005740.2-201ENST00000511085 419 ntBASIC11.7□□□□□ -0.54
GAPDHP04406 SCARNA21-201ENST00000517026 139 ntBASIC11.7□□□□□ -0.54
GAPDHP04406 AC084859.1-201ENST00000533002 670 ntTSL 4 BASIC11.7□□□□□ -0.54
GAPDHP04406 FAM86B1-218ENST00000534520 808 ntTSL 2 BASIC11.7□□□□□ -0.54
GAPDHP04406 PPP1R32-205ENST00000538185 1107 ntTSL 2 BASIC11.7□□□□□ -0.54
GAPDHP04406 PGAM1P5-201ENST00000548011 764 ntBASIC11.7□□□□□ -0.54
GAPDHP04406 AC000032.1-201ENST00000562538 491 ntTSL 2 BASIC11.7□□□□□ -0.54
GAPDHP04406 TMEM208-207ENST00000563953 887 ntTSL 2 BASIC11.7□□□□□ -0.54
GAPDHP04406 NAT9-222ENST00000583476 583 ntTSL 3 BASIC11.7□□□□□ -0.54
GAPDHP04406 AL358473.2-201ENST00000610411 556 ntTSL 4 BASIC11.7□□□□□ -0.54
GAPDHP04406 ASNA1-205ENST00000611688 1214 ntTSL 5 BASIC11.7□□□□□ -0.54
GAPDHP04406 AC005695.3-201ENST00000614522 232 ntBASIC11.7□□□□□ -0.54
GAPDHP04406 AC090386.2-201ENST00000623010 1039 ntBASIC11.7□□□□□ -0.54
GAPDHP04406 AP1B1-202ENST00000357586 4176 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
GAPDHP04406 RBM47-201ENST00000295971 4056 ntAPPRIS ALT1 TSL 5 BASIC11.7□□□□□ -0.54
GAPDHP04406 SLC38A5-213ENST00000620913 1993 ntAPPRIS P1 TSL 5 BASIC11.7□□□□□ -0.54
GAPDHP04406 COL6A3-206ENST00000409809 8916 ntTSL 5 BASIC11.7□□□□□ -0.54
GAPDHP04406 DPP10-201ENST00000310323 3052 ntAPPRIS P3 TSL 1 (best) BASIC11.7□□□□□ -0.54
GAPDHP04406 GPR35-205ENST00000438013 3821 ntAPPRIS P3 BASIC11.7□□□□□ -0.54
GAPDHP04406 NCOA7-203ENST00000392477 6457 ntAPPRIS P3 TSL 1 (best) BASIC11.7□□□□□ -0.54
GAPDHP04406 AC018445.4-201ENST00000624066 2291 ntBASIC11.7□□□□□ -0.54
GAPDHP04406 FMNL3-205ENST00000550488 4120 ntAPPRIS ALT2 TSL 5 BASIC11.7□□□□□ -0.54
GAPDHP04406 GOLGA8S-201ENST00000562295 1878 ntAPPRIS P1 TSL 5 BASIC11.7□□□□□ -0.54
GAPDHP04406 CDCA7-203ENST00000410019 1488 ntTSL 2 BASIC11.7□□□□□ -0.54
GAPDHP04406 HTR5A-201ENST00000287907 2912 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
GAPDHP04406 AP4M1-201ENST00000359593 1817 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
GAPDHP04406 TNNI1-202ENST00000361379 5413 ntAPPRIS P2 TSL 5 BASIC11.69□□□□□ -0.54
GAPDHP04406 AL590644.1-201ENST00000412427 4676 ntTSL 4 BASIC11.69□□□□□ -0.54
GAPDHP04406 PLXNB1-201ENST00000296440 7143 ntAPPRIS P2 TSL 1 (best) BASIC11.69□□□□□ -0.54
GAPDHP04406 SERPING1-204ENST00000378324 1751 ntAPPRIS ALT2 TSL 2 BASIC11.69□□□□□ -0.54
GAPDHP04406 GFRA2-202ENST00000517328 2104 ntAPPRIS P1 TSL 5 BASIC11.69□□□□□ -0.54
GAPDHP04406 DPAGT1-217ENST00000639704 1719 ntTSL 5 BASIC11.69□□□□□ -0.54
GAPDHP04406 PSMC3-212ENST00000602866 1373 ntAPPRIS ALT1 TSL 1 (best) BASIC11.69□□□□□ -0.54
GAPDHP04406 RSPO2-202ENST00000517781 2748 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
GAPDHP04406 NUP54-201ENST00000264883 2367 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
GAPDHP04406 STK38L-201ENST00000389032 5068 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
GAPDHP04406 DSCAML1-203ENST00000527706 6099 ntTSL 5 BASIC11.69□□□□□ -0.54
GAPDHP04406 SLC35A4-203ENST00000612662 2657 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
GAPDHP04406 KCNMA1-216ENST00000457953 3976 ntAPPRIS ALT2 TSL 5 BASIC11.69□□□□□ -0.54
GAPDHP04406 CCDC117-205ENST00000448492 3937 ntTSL 2 BASIC11.69□□□□□ -0.54
GAPDHP04406 MON1B-201ENST00000248248 6091 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
GAPDHP04406 NPFF-201ENST00000267017 592 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
GAPDHP04406 C1orf53-201ENST00000367393 588 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Retrieved 100 of 98,524 protein–RNA pairs in 49.2 ms