Protein–RNA interactions for Protein: O00501

CLDN5, Claudin-5, humanhuman

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN5O00501 APBB3-205ENST00000412920 1455 ntAPPRIS ALT1 TSL 1 (best) BASIC14.61□□□□□ -0.07
CLDN5O00501 TAGLN-207ENST00000532870 2166 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
CLDN5O00501 METTL13-203ENST00000367737 2865 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
CLDN5O00501 MAGI3-202ENST00000369611 3596 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
CLDN5O00501 AC104836.1-202ENST00000636805 6041 ntAPPRIS P1 TSL 5 BASIC14.61□□□□□ -0.07
CLDN5O00501 GMPR2-206ENST00000557854 2025 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
CLDN5O00501 MAP2K3-214ENST00000613338 2029 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
CLDN5O00501 TBC1D1-201ENST00000261439 5700 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
CLDN5O00501 MAP3K4-204ENST00000392142 5490 ntAPPRIS P4 TSL 1 (best) BASIC14.61□□□□□ -0.07
CLDN5O00501 LINC02135-201ENST00000599486 2065 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
CLDN5O00501 PHTF2-204ENST00000415251 1738 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
CLDN5O00501 ITGB2-208ENST00000397857 2813 ntAPPRIS P1 TSL 5 BASIC14.61□□□□□ -0.07
CLDN5O00501 PCNA-202ENST00000379160 1359 ntAPPRIS P1 TSL 5 BASIC14.6□□□□□ -0.07
CLDN5O00501 ASPG-206ENST00000551177 4851 ntAPPRIS P2 TSL 1 (best) BASIC14.6□□□□□ -0.07
CLDN5O00501 DDX46-212ENST00000628477 1584 ntTSL 5 BASIC14.6□□□□□ -0.07
CLDN5O00501 MCHR1-201ENST00000249016 2851 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
CLDN5O00501 HIPK3-203ENST00000456517 7399 ntAPPRIS P1 TSL 2 BASIC14.6□□□□□ -0.07
CLDN5O00501 IL20RA-201ENST00000316649 3485 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
CLDN5O00501 MAP7-205ENST00000544465 2744 ntAPPRIS ALT2 TSL 2 BASIC14.6□□□□□ -0.07
CLDN5O00501 MED6-201ENST00000256379 1995 ntAPPRIS P2 TSL 1 (best) BASIC14.6□□□□□ -0.07
CLDN5O00501 NAALADL1-201ENST00000340252 2376 ntTSL 5 BASIC14.6□□□□□ -0.07
CLDN5O00501 MRPL55-205ENST00000366731 1423 ntTSL 2 BASIC14.6□□□□□ -0.07
CLDN5O00501 BICDL2-204ENST00000573514 3519 ntTSL 2 BASIC14.6□□□□□ -0.07
CLDN5O00501 VSIR-201ENST00000394957 4689 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
CLDN5O00501 EPHB4-210ENST00000616502 3737 ntTSL 5 BASIC14.6□□□□□ -0.07
CLDN5O00501 CEP128-201ENST00000216517 1606 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
CLDN5O00501 GPER1-203ENST00000397092 2971 ntAPPRIS P1 TSL 2 BASIC14.6□□□□□ -0.07
CLDN5O00501 FAM224A-201ENST00000419557 2031 ntTSL 2 BASIC14.6□□□□□ -0.07
CLDN5O00501 GDPD5-215ENST00000533805 2424 ntTSL 2 BASIC14.6□□□□□ -0.07
CLDN5O00501 CD93-201ENST00000246006 6708 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
CLDN5O00501 NR0B2-201ENST00000254227 1156 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
CLDN5O00501 TMSB15A-201ENST00000289373 685 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
CLDN5O00501 CMTM5-201ENST00000339180 1173 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
CLDN5O00501 HCRTR1-201ENST00000373705 1170 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
CLDN5O00501 AC073210.1-201ENST00000414799 232 ntBASIC14.6□□□□□ -0.07
CLDN5O00501 LINC00866-201ENST00000427379 418 ntTSL 2 BASIC14.6□□□□□ -0.07
CLDN5O00501 AC068134.1-201ENST00000441266 481 ntTSL 3 BASIC14.6□□□□□ -0.07
CLDN5O00501 LDHBP1-201ENST00000455730 1119 ntBASIC14.6□□□□□ -0.07
CLDN5O00501 ATP1A4-205ENST00000470705 886 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
CLDN5O00501 CD44-224ENST00000526669 870 ntTSL 5 BASIC14.6□□□□□ -0.07
CLDN5O00501 TNFSF13B-206ENST00000542136 495 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
CLDN5O00501 AC068152.1-205ENST00000575173 1081 ntTSL 3 BASIC14.6□□□□□ -0.07
CLDN5O00501 MIR3940-201ENST00000579148 102 ntBASIC14.6□□□□□ -0.07
CLDN5O00501 RN7SL556P-201ENST00000582856 298 ntBASIC14.6□□□□□ -0.07
CLDN5O00501 AL118522.1-201ENST00000611368 560 ntBASIC14.6□□□□□ -0.07
CLDN5O00501 PATL2-208ENST00000560780 1863 ntAPPRIS ALT2 TSL 2 BASIC14.6□□□□□ -0.07
CLDN5O00501 TTC28-AS1-212ENST00000433317 3080 ntTSL 5 BASIC14.6□□□□□ -0.07
CLDN5O00501 SMIM12-206ENST00000521580 3454 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
CLDN5O00501 PDPR-202ENST00000398122 2734 ntTSL 2 BASIC14.6□□□□□ -0.07
CLDN5O00501 MINDY1-205ENST00000493834 1546 ntTSL 2 BASIC14.6□□□□□ -0.07
CLDN5O00501 FAF1-202ENST00000396153 6817 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
CLDN5O00501 ALAD-201ENST00000409155 3173 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
CLDN5O00501 SLC34A1-201ENST00000324417 2573 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
CLDN5O00501 OSGIN1-201ENST00000343939 2391 ntTSL 2 BASIC14.6□□□□□ -0.07
CLDN5O00501 WDR46-231ENST00000374617 2358 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
CLDN5O00501 ANKMY1-204ENST00000391987 3221 ntTSL 5 BASIC14.6□□□□□ -0.07
CLDN5O00501 B3GAT2-201ENST00000230053 6565 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
CLDN5O00501 SPDYA-202ENST00000379579 1759 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
CLDN5O00501 BAIAP3-216ENST00000628027 4732 ntTSL 5 BASIC14.6□□□□□ -0.07
CLDN5O00501 LINC01114-203ENST00000425879 2434 ntTSL 2 BASIC14.6□□□□□ -0.07
CLDN5O00501 FHL2-206ENST00000408995 1367 ntAPPRIS P1 TSL 2 BASIC14.6□□□□□ -0.07
CLDN5O00501 UPK1A-203ENST00000616789 1366 ntTSL 5 BASIC14.6□□□□□ -0.07
CLDN5O00501 PCDH10-203ENST00000618019 4574 ntAPPRIS ALT2 BASIC14.59□□□□□ -0.07
CLDN5O00501 SYNRG-217ENST00000612223 8229 ntAPPRIS P4 TSL 1 (best) BASIC14.59□□□□□ -0.07
CLDN5O00501 MPZ-204ENST00000491222 1824 ntTSL 2 BASIC14.59□□□□□ -0.07
CLDN5O00501 AL365181.1-201ENST00000564032 1828 ntBASIC14.59□□□□□ -0.07
CLDN5O00501 MANEA-AS1-201ENST00000564541 2268 ntBASIC14.59□□□□□ -0.07
CLDN5O00501 SMARCA2-203ENST00000349721 5761 ntTSL 5 BASIC14.59□□□□□ -0.07
CLDN5O00501 FAM156A-208ENST00000615092 2098 ntAPPRIS P2 TSL 5 BASIC14.59□□□□□ -0.07
CLDN5O00501 DHCR24-201ENST00000371269 4250 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
CLDN5O00501 IL12RB1-203ENST00000593993 2782 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
CLDN5O00501 PPARGC1B-203ENST00000394320 4803 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
CLDN5O00501 VRK3-201ENST00000316763 1938 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
CLDN5O00501 LINC00639-201ENST00000553932 4496 ntTSL 2 BASIC14.59□□□□□ -0.07
CLDN5O00501 BNIP3-201ENST00000368636 2861 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
CLDN5O00501 KRT74-203ENST00000549343 2858 ntTSL 5 BASIC14.59□□□□□ -0.07
CLDN5O00501 HMOX2-216ENST00000613539 1703 ntTSL 5 BASIC14.59□□□□□ -0.07
CLDN5O00501 PIGL-201ENST00000225609 1137 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
CLDN5O00501 IL23A-201ENST00000228534 1046 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
CLDN5O00501 RIDA-201ENST00000254878 1057 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
CLDN5O00501 APOA1-202ENST00000359492 932 ntAPPRIS P1 TSL 2 BASIC14.59□□□□□ -0.07
CLDN5O00501 SSR4-202ENST00000370085 526 ntTSL 2 BASIC14.59□□□□□ -0.07
CLDN5O00501 UPK1A-202ENST00000379013 1016 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
CLDN5O00501 LINC00211-203ENST00000446799 662 ntTSL 3 BASIC14.59□□□□□ -0.07
CLDN5O00501 AC006529.1-201ENST00000459978 637 ntBASIC14.59□□□□□ -0.07
CLDN5O00501 AC233724.6-201ENST00000503184 1088 ntAPPRIS P1 BASIC14.59□□□□□ -0.07
CLDN5O00501 AC108199.1-201ENST00000504249 508 ntTSL 3 BASIC14.59□□□□□ -0.07
CLDN5O00501 LINC00634-202ENST00000505157 222 ntBASIC14.59□□□□□ -0.07
CLDN5O00501 LINC02285-201ENST00000557121 943 ntTSL 2 BASIC14.59□□□□□ -0.07
CLDN5O00501 AP005901.3-201ENST00000581666 415 ntTSL 3 BASIC14.59□□□□□ -0.07
CLDN5O00501 ZNF790-AS1-203ENST00000588906 850 ntTSL 2 BASIC14.59□□□□□ -0.07
CLDN5O00501 GABRB3-219ENST00000636466 4509 ntTSL 5 BASIC14.59□□□□□ -0.07
CLDN5O00501 AC020917.4-201ENST00000623994 1999 ntBASIC14.59□□□□□ -0.07
CLDN5O00501 SLC4A7-211ENST00000445684 4061 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
CLDN5O00501 TMEM173-201ENST00000330794 1771 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
CLDN5O00501 CD48-201ENST00000368045 1793 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
CLDN5O00501 AP003555.1-202ENST00000511013 1755 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
CLDN5O00501 STARD8-201ENST00000252336 4862 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
CLDN5O00501 TRAIP-201ENST00000331456 2028 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
CLDN5O00501 AC005562.1-201ENST00000583030 3219 ntBASIC14.59□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 45.2 ms