Protein–RNA interactions for Protein: Q9UFD9

RIMBP3, RIMS-binding protein 3A, humanhuman

Predictions only

Length 1,639 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIMBP3Q9UFD9 NGLY1-205ENST00000417874 2062 ntTSL 2 BASIC20.74■□□□□ 0.91
RIMBP3Q9UFD9 BRCC3-201ENST00000330045 2496 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
RIMBP3Q9UFD9 MARK2-209ENST00000509502 2862 ntAPPRIS ALT2 TSL 2 BASIC20.73■□□□□ 0.91
RIMBP3Q9UFD9 CROT-203ENST00000419147 2959 ntTSL 2 BASIC20.73■□□□□ 0.91
RIMBP3Q9UFD9 SFT2D3-201ENST00000310981 3735 ntAPPRIS P1 BASIC20.73■□□□□ 0.91
RIMBP3Q9UFD9 NAMA-207ENST00000605707 1748 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
RIMBP3Q9UFD9 NKX3-1-201ENST00000380871 3271 ntAPPRIS P3 TSL 1 (best) BASIC20.73■□□□□ 0.91
RIMBP3Q9UFD9 TRMT61B-201ENST00000306108 1836 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
RIMBP3Q9UFD9 LINC01535-206ENST00000592712 1699 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
RIMBP3Q9UFD9 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
RIMBP3Q9UFD9 NSMF-204ENST00000371473 3556 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
RIMBP3Q9UFD9 LY6D-201ENST00000301263 804 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
RIMBP3Q9UFD9 SNHG15-201ENST00000438705 509 ntTSL 3 BASIC20.73■□□□□ 0.91
RIMBP3Q9UFD9 TMEM91-206ENST00000447302 721 ntTSL 2 BASIC20.73■□□□□ 0.91
RIMBP3Q9UFD9 RN7SL164P-201ENST00000482613 303 ntBASIC20.73■□□□□ 0.91
RIMBP3Q9UFD9 RN7SL617P-201ENST00000485298 308 ntBASIC20.73■□□□□ 0.91
RIMBP3Q9UFD9 AP001266.1-201ENST00000531155 1044 ntTSL 2 BASIC20.73■□□□□ 0.91
RIMBP3Q9UFD9 AC008014.1-201ENST00000551503 829 ntTSL 3 BASIC20.73■□□□□ 0.91
RIMBP3Q9UFD9 AC013489.2-201ENST00000558732 276 ntBASIC20.73■□□□□ 0.91
RIMBP3Q9UFD9 AP000894.2-203ENST00000580612 439 ntTSL 3 BASIC20.73■□□□□ 0.91
RIMBP3Q9UFD9 PTOV1-AS2-201ENST00000593654 596 ntTSL 2 BASIC20.73■□□□□ 0.91
RIMBP3Q9UFD9 SEC22C-205ENST00000417572 1513 ntTSL 3 BASIC20.73■□□□□ 0.91
RIMBP3Q9UFD9 PCDHGA11-202ENST00000518882 2263 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
RIMBP3Q9UFD9 HRK-201ENST00000257572 5789 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
RIMBP3Q9UFD9 EPC2-203ENST00000409654 1624 ntTSL 3 BASIC20.73■□□□□ 0.91
RIMBP3Q9UFD9 ARSB-201ENST00000264914 5327 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
RIMBP3Q9UFD9 USF1-202ENST00000368020 1717 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
RIMBP3Q9UFD9 DDX43-201ENST00000370336 2513 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
RIMBP3Q9UFD9 GALC-206ENST00000544807 2528 ntTSL 2 BASIC20.72■□□□□ 0.91
RIMBP3Q9UFD9 EXD3-201ENST00000340951 2872 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
RIMBP3Q9UFD9 MPZL1-201ENST00000359523 5010 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
RIMBP3Q9UFD9 AHCYL1-202ENST00000369799 4015 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
RIMBP3Q9UFD9 ZFAND1-201ENST00000220669 1798 ntAPPRIS P3 TSL 1 (best) BASIC20.72■□□□□ 0.91
RIMBP3Q9UFD9 ZFAND1-221ENST00000523096 1778 ntAPPRIS ALT1 TSL 1 (best) BASIC20.72■□□□□ 0.91
RIMBP3Q9UFD9 AC046158.3-201ENST00000624947 2558 ntBASIC20.72■□□□□ 0.91
RIMBP3Q9UFD9 RPL36AL-201ENST00000298289 746 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
RIMBP3Q9UFD9 AL590302.2-201ENST00000435810 1122 ntTSL 5 BASIC20.72■□□□□ 0.91
RIMBP3Q9UFD9 AL022313.2-201ENST00000442579 372 ntTSL 3 BASIC20.72■□□□□ 0.91
RIMBP3Q9UFD9 AC073655.2-201ENST00000551941 796 ntTSL 2 BASIC20.72■□□□□ 0.91
RIMBP3Q9UFD9 AC002306.1-201ENST00000559614 937 ntTSL 3 BASIC20.72■□□□□ 0.91
RIMBP3Q9UFD9 MIR4725-201ENST00000581700 90 ntBASIC20.72■□□□□ 0.91
RIMBP3Q9UFD9 RN7SL217P-201ENST00000584520 286 ntBASIC20.72■□□□□ 0.91
RIMBP3Q9UFD9 METTL23-211ENST00000589977 617 ntTSL 3 BASIC20.72■□□□□ 0.91
RIMBP3Q9UFD9 BX255925.2-201ENST00000605600 515 ntBASIC20.72■□□□□ 0.91
RIMBP3Q9UFD9 FAM74A7-201ENST00000613652 727 ntTSL 5 BASIC20.72■□□□□ 0.91
RIMBP3Q9UFD9 MXRA7-201ENST00000355797 5661 ntAPPRIS P4 TSL 2 BASIC20.72■□□□□ 0.91
RIMBP3Q9UFD9 ADAM15-201ENST00000271836 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
RIMBP3Q9UFD9 KTN1-AS1-202ENST00000412224 2185 ntTSL 2 BASIC20.72■□□□□ 0.91
RIMBP3Q9UFD9 FAM156A-223ENST00000623782 1931 ntAPPRIS P2 TSL 3 BASIC20.72■□□□□ 0.91
RIMBP3Q9UFD9 CLASP2-201ENST00000313350 1597 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
RIMBP3Q9UFD9 HNRNPC-204ENST00000449098 1599 ntAPPRIS ALT1 TSL 5 BASIC20.72■□□□□ 0.91
RIMBP3Q9UFD9 GMPR2-224ENST00000559910 1562 ntTSL 5 BASIC20.72■□□□□ 0.91
RIMBP3Q9UFD9 BAK1-202ENST00000374467 2136 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
RIMBP3Q9UFD9 DDC-AS1-201ENST00000454521 1776 ntTSL 2 BASIC20.72■□□□□ 0.91
RIMBP3Q9UFD9 AC060234.2-201ENST00000428825 1610 ntTSL 5 BASIC20.72■□□□□ 0.91
RIMBP3Q9UFD9 MCEE-201ENST00000244217 835 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
RIMBP3Q9UFD9 OR2T1-201ENST00000366474 1110 ntBASIC20.71■□□□□ 0.91
RIMBP3Q9UFD9 PPP1R2P9-201ENST00000378131 880 ntAPPRIS P1 BASIC20.71■□□□□ 0.91
RIMBP3Q9UFD9 ANKRD20A11P-205ENST00000442192 920 ntTSL 3 BASIC20.71■□□□□ 0.91
RIMBP3Q9UFD9 ST3GAL6-207ENST00000468553 715 ntTSL 3 BASIC20.71■□□□□ 0.91
RIMBP3Q9UFD9 FAU-206ENST00000529259 1125 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
RIMBP3Q9UFD9 LINC01651-201ENST00000624642 350 ntTSL 5 BASIC20.71■□□□□ 0.91
RIMBP3Q9UFD9 AC009961.1-203ENST00000607836 2520 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
RIMBP3Q9UFD9 PRSS8-201ENST00000317508 1872 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
RIMBP3Q9UFD9 LINC00900-201ENST00000499809 3322 ntTSL 2 BASIC20.71■□□□□ 0.91
RIMBP3Q9UFD9 LTBR-201ENST00000228918 2260 ntAPPRIS P3 TSL 1 (best) BASIC20.71■□□□□ 0.91
RIMBP3Q9UFD9 TMEM143-201ENST00000293261 2560 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
RIMBP3Q9UFD9 SLC39A11-202ENST00000542342 2752 ntAPPRIS ALT1 TSL 2 BASIC20.71■□□□□ 0.91
RIMBP3Q9UFD9 TDG-201ENST00000266775 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
RIMBP3Q9UFD9 NXPE4-201ENST00000375478 1822 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
RIMBP3Q9UFD9 HOMER1-202ENST00000334082 5881 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
RIMBP3Q9UFD9 LILRP2-201ENST00000413439 2127 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
RIMBP3Q9UFD9 ANXA11-203ENST00000422982 2534 ntAPPRIS P3 TSL 1 (best) BASIC20.71■□□□□ 0.91
RIMBP3Q9UFD9 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC20.71■□□□□ 0.91
RIMBP3Q9UFD9 FKBP9-201ENST00000242209 3462 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
RIMBP3Q9UFD9 MAPK8IP1-202ENST00000395629 3180 ntTSL 5 BASIC20.71■□□□□ 0.91
RIMBP3Q9UFD9 SPHK2-206ENST00000598088 2866 ntAPPRIS P3 TSL 1 (best) BASIC20.71■□□□□ 0.91
RIMBP3Q9UFD9 AL031663.2-201ENST00000417630 355 ntTSL 2 BASIC20.71■□□□□ 0.91
RIMBP3Q9UFD9 IFT22-204ENST00000437644 875 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
RIMBP3Q9UFD9 LINC01046-201ENST00000443719 405 ntTSL 3 BASIC20.71■□□□□ 0.91
RIMBP3Q9UFD9 CHCHD3P3-201ENST00000446783 640 ntBASIC20.71■□□□□ 0.91
RIMBP3Q9UFD9 AC022182.2-201ENST00000525556 859 ntTSL 2 BASIC20.71■□□□□ 0.91
RIMBP3Q9UFD9 C12orf73-205ENST00000547945 463 ntAPPRIS P1 TSL 2 BASIC20.71■□□□□ 0.91
RIMBP3Q9UFD9 FAM214B-203ENST00000378561 5771 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
RIMBP3Q9UFD9 SLC22A3-201ENST00000275300 3348 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
RIMBP3Q9UFD9 SLC29A4-203ENST00000406453 2734 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
RIMBP3Q9UFD9 CD24-204ENST00000619133 2513 ntAPPRIS P3 TSL 2 BASIC20.71■□□□□ 0.91
RIMBP3Q9UFD9 LRFN1-201ENST00000248668 3381 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
RIMBP3Q9UFD9 TNFAIP3-211ENST00000621150 1613 ntTSL 5 BASIC20.7■□□□□ 0.9
RIMBP3Q9UFD9 IMPDH1P8-201ENST00000413639 1525 ntBASIC20.7■□□□□ 0.9
RIMBP3Q9UFD9 FAM95B1-211ENST00000592053 1541 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
RIMBP3Q9UFD9 AL669942.1-203ENST00000610972 1541 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
RIMBP3Q9UFD9 PI4K2B-201ENST00000264864 3540 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
RIMBP3Q9UFD9 GSTM4-204ENST00000369836 1412 ntAPPRIS P2 TSL 1 (best) BASIC20.7■□□□□ 0.9
RIMBP3Q9UFD9 GRAMD2B-217ENST00000515200 3109 ntTSL 5 BASIC20.7■□□□□ 0.9
RIMBP3Q9UFD9 TFAP2A-213ENST00000482890 2071 ntAPPRIS P3 TSL 5 BASIC20.7■□□□□ 0.9
RIMBP3Q9UFD9 LAMP2-201ENST00000200639 1867 ntAPPRIS P5 TSL 1 (best) BASIC20.7■□□□□ 0.9
RIMBP3Q9UFD9 DAP3-225ENST00000535183 1894 ntTSL 2 BASIC20.7■□□□□ 0.9
RIMBP3Q9UFD9 HSPB7-202ENST00000375718 2415 ntTSL 2 BASIC20.7■□□□□ 0.9
RIMBP3Q9UFD9 DENND5A-201ENST00000328194 5031 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 59.8 ms