Protein–RNA interactions for Protein: Q96LD4

TRIM47, Tripartite motif-containing protein 47, humanhuman

Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47Q96LD4 SLC4A11-202ENST00000380059 3229 ntAPPRIS ALT2 TSL 2 BASIC16.28■□□□□ 0.2
TRIM47Q96LD4 MUTYH-210ENST00000450313 1929 ntTSL 5 BASIC16.28■□□□□ 0.2
TRIM47Q96LD4 ABCG2-201ENST00000237612 4479 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
TRIM47Q96LD4 PRELID3B-202ENST00000371033 943 ntTSL 2 BASIC16.28■□□□□ 0.2
TRIM47Q96LD4 AP000354.1-201ENST00000396982 456 ntBASIC16.28■□□□□ 0.2
TRIM47Q96LD4 NME6-208ENST00000435684 599 ntTSL 2 BASIC16.28■□□□□ 0.2
TRIM47Q96LD4 AL451000.1-201ENST00000451300 1186 ntBASIC16.28■□□□□ 0.2
TRIM47Q96LD4 GRPEL2P1-201ENST00000453145 339 ntBASIC16.28■□□□□ 0.2
TRIM47Q96LD4 IGKV1D-43-201ENST00000468879 532 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
TRIM47Q96LD4 SBSN-202ENST00000518157 957 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
TRIM47Q96LD4 KRT18P37-201ENST00000520711 1282 ntBASIC16.28■□□□□ 0.2
TRIM47Q96LD4 AC079949.1-201ENST00000541419 505 ntTSL 3 BASIC16.28■□□□□ 0.2
TRIM47Q96LD4 KLF17P1-201ENST00000547105 1126 ntBASIC16.28■□□□□ 0.2
TRIM47Q96LD4 TP53-221ENST00000615910 1149 ntTSL 5 BASIC16.28■□□□□ 0.2
TRIM47Q96LD4 AP000769.1-203ENST00000637245 208 ntBASIC16.28■□□□□ 0.2
TRIM47Q96LD4 ARRDC4-201ENST00000268042 4072 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
TRIM47Q96LD4 SEPT7-202ENST00000399034 4399 ntTSL 5 BASIC16.28■□□□□ 0.2
TRIM47Q96LD4 CDIP1-205ENST00000563332 2774 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
TRIM47Q96LD4 AC087386.2-201ENST00000623212 4637 ntBASIC16.28■□□□□ 0.2
TRIM47Q96LD4 MAPRE2-201ENST00000300249 4265 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
TRIM47Q96LD4 CBX3-201ENST00000337620 2128 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
TRIM47Q96LD4 MPP2-214ENST00000523501 2121 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
TRIM47Q96LD4 TRIM45-202ENST00000369461 2415 ntTSL 5 BASIC16.28■□□□□ 0.2
TRIM47Q96LD4 GDI2-203ENST00000380191 2412 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
TRIM47Q96LD4 GOLGA2-212ENST00000609374 2973 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
TRIM47Q96LD4 DDX41-208ENST00000507955 2607 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
TRIM47Q96LD4 UBASH3A-203ENST00000398367 1733 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
TRIM47Q96LD4 YIPF3-213ENST00000506469 1444 ntTSL 5 BASIC16.28■□□□□ 0.2
TRIM47Q96LD4 PTENP1-202ENST00000532280 3996 ntBASIC16.28■□□□□ 0.2
TRIM47Q96LD4 AC131212.3-201ENST00000624087 4219 ntBASIC16.27■□□□□ 0.2
TRIM47Q96LD4 PSMG2-201ENST00000317615 1686 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
TRIM47Q96LD4 SVOPL-203ENST00000421622 1653 ntTSL 5 BASIC16.27■□□□□ 0.2
TRIM47Q96LD4 APBB1IP-202ENST00000376236 2771 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.2
TRIM47Q96LD4 CAND2-201ENST00000295989 4429 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
TRIM47Q96LD4 LCMT1-203ENST00000399069 1368 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
TRIM47Q96LD4 ASGR1-209ENST00000619926 1384 ntTSL 5 BASIC16.27■□□□□ 0.2
TRIM47Q96LD4 DNER-201ENST00000341772 3260 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
TRIM47Q96LD4 PRDM16-206ENST00000511072 4282 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.2
TRIM47Q96LD4 NDRG4-217ENST00000562999 2931 ntTSL 5 BASIC16.27■□□□□ 0.2
TRIM47Q96LD4 CSRP1-202ENST00000367306 2129 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.2
TRIM47Q96LD4 PLXNB3-209ENST00000538966 6377 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.2
TRIM47Q96LD4 ARL1-202ENST00000536227 1322 ntTSL 2 BASIC16.27■□□□□ 0.2
TRIM47Q96LD4 FMO5-201ENST00000254090 2632 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
TRIM47Q96LD4 OSBPL1A-201ENST00000319481 4195 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
TRIM47Q96LD4 ANXA9-201ENST00000368947 1826 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
TRIM47Q96LD4 RARS2-201ENST00000369536 1818 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
TRIM47Q96LD4 ALDH1A3-202ENST00000346623 3104 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
TRIM47Q96LD4 HSPA8P5-201ENST00000456928 2069 ntBASIC16.27■□□□□ 0.2
TRIM47Q96LD4 AL357054.3-201ENST00000607084 2055 ntTSL 5 BASIC16.27■□□□□ 0.2
TRIM47Q96LD4 COL1A2-201ENST00000297268 5411 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
TRIM47Q96LD4 PCDHGA11-201ENST00000398587 4647 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
TRIM47Q96LD4 CUL1-201ENST00000325222 3064 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
TRIM47Q96LD4 KCNC2-202ENST00000350228 3344 ntAPPRIS ALT2 TSL 2 BASIC16.27■□□□□ 0.2
TRIM47Q96LD4 VPS25-201ENST00000253794 1101 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
TRIM47Q96LD4 SUMO4-201ENST00000326669 1066 ntAPPRIS P1 BASIC16.27■□□□□ 0.2
TRIM47Q96LD4 KCNK18-201ENST00000334549 1155 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
TRIM47Q96LD4 EIF4E2-205ENST00000409394 604 ntTSL 3 BASIC16.27■□□□□ 0.2
TRIM47Q96LD4 AC023141.7-201ENST00000430646 407 ntBASIC16.27■□□□□ 0.2
TRIM47Q96LD4 AL592301.1-201ENST00000439501 864 ntTSL 3 BASIC16.27■□□□□ 0.2
TRIM47Q96LD4 RPL3P5-201ENST00000441645 1232 ntBASIC16.27■□□□□ 0.2
TRIM47Q96LD4 AC106869.1-201ENST00000448713 577 ntTSL 4 BASIC16.27■□□□□ 0.2
TRIM47Q96LD4 PFN2-212ENST00000490975 858 ntTSL 4 BASIC16.27■□□□□ 0.2
TRIM47Q96LD4 AL928742.1-201ENST00000497397 548 ntTSL 4 BASIC16.27■□□□□ 0.2
TRIM47Q96LD4 TCAM1P-207ENST00000485295 1537 ntBASIC16.27■□□□□ 0.2
TRIM47Q96LD4 ALDH3A1-201ENST00000225740 1779 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
TRIM47Q96LD4 ZNF417-203ENST00000595559 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.19
TRIM47Q96LD4 LAP3P2-201ENST00000454686 1454 ntBASIC16.27■□□□□ 0.19
TRIM47Q96LD4 UHRF1-204ENST00000616255 2661 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
TRIM47Q96LD4 SUOX-201ENST00000266971 2364 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.19
TRIM47Q96LD4 CD74-202ENST00000353334 1449 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
TRIM47Q96LD4 GMEB1-202ENST00000361872 1894 ntAPPRIS ALT1 TSL 1 (best) BASIC16.27■□□□□ 0.19
TRIM47Q96LD4 AC019109.1-201ENST00000401725 1874 ntBASIC16.27■□□□□ 0.19
TRIM47Q96LD4 PAPOLA-223ENST00000557320 3264 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
TRIM47Q96LD4 CSNK1D-202ENST00000314028 3712 ntAPPRIS P4 TSL 1 (best) BASIC16.27■□□□□ 0.19
TRIM47Q96LD4 LINC00299-202ENST00000442956 2342 ntTSL 2 BASIC16.27■□□□□ 0.19
TRIM47Q96LD4 IL17RD-203ENST00000463523 2348 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
TRIM47Q96LD4 SMTN-223ENST00000619644 3227 ntTSL 2 BASIC16.26■□□□□ 0.19
TRIM47Q96LD4 SPRED1-201ENST00000299084 7780 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
TRIM47Q96LD4 DNAJC14-203ENST00000357606 3416 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
TRIM47Q96LD4 MED4-201ENST00000258648 2022 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
TRIM47Q96LD4 NOX5-203ENST00000448182 2498 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
TRIM47Q96LD4 PEX5L-211ENST00000472994 2235 ntAPPRIS ALT2 TSL 2 BASIC16.26■□□□□ 0.19
TRIM47Q96LD4 ARHGAP45-202ENST00000539243 4184 ntAPPRIS ALT2 TSL 2 BASIC16.26■□□□□ 0.19
TRIM47Q96LD4 AC013472.1-203ENST00000380387 1966 ntTSL 4 BASIC16.26■□□□□ 0.19
TRIM47Q96LD4 FBRS-201ENST00000287468 2811 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
TRIM47Q96LD4 RASSF3-204ENST00000542104 3492 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
TRIM47Q96LD4 DNMT3L-201ENST00000270172 1706 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
TRIM47Q96LD4 MKL1-202ENST00000396617 4505 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
TRIM47Q96LD4 CDCA3-207ENST00000538862 1943 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
TRIM47Q96LD4 CRMP1-205ENST00000512574 2764 ntTSL 2 BASIC16.26■□□□□ 0.19
TRIM47Q96LD4 MED11-201ENST00000293777 833 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
TRIM47Q96LD4 SLC37A4-201ENST00000330775 2102 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
TRIM47Q96LD4 HLA-DRB5-201ENST00000374975 1260 ntAPPRIS P1 BASIC16.26■□□□□ 0.19
TRIM47Q96LD4 OR7E115P-201ENST00000382617 1024 ntBASIC16.26■□□□□ 0.19
TRIM47Q96LD4 CST1-202ENST00000398402 655 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
TRIM47Q96LD4 OR52M2P-201ENST00000414298 959 ntBASIC16.26■□□□□ 0.19
TRIM47Q96LD4 HDAC2-AS2-203ENST00000436876 591 ntTSL 5 BASIC16.26■□□□□ 0.19
TRIM47Q96LD4 RN7SL788P-201ENST00000460504 316 ntBASIC16.26■□□□□ 0.19
TRIM47Q96LD4 AC023906.1-201ENST00000486386 453 ntBASIC16.26■□□□□ 0.19
TRIM47Q96LD4 RN7SL288P-201ENST00000490496 291 ntBASIC16.26■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 31.9 ms