Protein–RNA interactions for Protein: Q93077

HIST1H2AC, Histone H2A type 1-C, humanhuman

Predictions only

Length 130 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H2ACQ93077 MYH3-205ENST00000583535 6037 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
HIST1H2ACQ93077 SCNN1A-215ENST00000540037 3040 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
HIST1H2ACQ93077 DCAF8L2-203ENST00000545306 2013 ntAPPRIS P1 BASIC12.78□□□□□ -0.36
HIST1H2ACQ93077 PPP3CA-202ENST00000394853 3604 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
HIST1H2ACQ93077 FGGY-204ENST00000371218 2052 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
HIST1H2ACQ93077 FGFRL1-201ENST00000264748 3100 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
HIST1H2ACQ93077 GGT1-203ENST00000400382 2628 ntAPPRIS P1 TSL 2 BASIC12.77□□□□□ -0.36
HIST1H2ACQ93077 CHL1-201ENST00000256509 8023 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
HIST1H2ACQ93077 AC015712.2-202ENST00000560068 3213 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
HIST1H2ACQ93077 AL359643.2-201ENST00000606227 3273 ntTSL 2 BASIC12.77□□□□□ -0.36
HIST1H2ACQ93077 PCDHB9-201ENST00000316105 4415 ntAPPRIS P1 BASIC12.77□□□□□ -0.36
HIST1H2ACQ93077 AC007663.2-201ENST00000506039 2228 ntTSL 2 BASIC12.77□□□□□ -0.36
HIST1H2ACQ93077 L3MBTL1-204ENST00000418998 3365 ntAPPRIS ALT2 TSL 2 BASIC12.77□□□□□ -0.36
HIST1H2ACQ93077 CACNA1C-209ENST00000399603 7377 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.36
HIST1H2ACQ93077 UBE2D3-210ENST00000453744 3990 ntAPPRIS ALT1 TSL 1 (best) BASIC12.77□□□□□ -0.36
HIST1H2ACQ93077 VPS13A-204ENST00000376634 10269 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.36
HIST1H2ACQ93077 LDLRAD2-201ENST00000344642 4012 ntAPPRIS P1 TSL 2 BASIC12.77□□□□□ -0.36
HIST1H2ACQ93077 COG5-201ENST00000297135 4060 ntAPPRIS P4 TSL 1 (best) BASIC12.77□□□□□ -0.36
HIST1H2ACQ93077 AP4M1-201ENST00000359593 1817 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
HIST1H2ACQ93077 EPHA5-203ENST00000432638 3662 ntTSL 5 BASIC12.77□□□□□ -0.37
HIST1H2ACQ93077 RAB40AL-201ENST00000218249 1029 ntAPPRIS P1 BASIC12.77□□□□□ -0.37
HIST1H2ACQ93077 MRPL32-201ENST00000223324 1035 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
HIST1H2ACQ93077 EDF1-202ENST00000371648 809 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
HIST1H2ACQ93077 LRRC30-201ENST00000383467 923 ntAPPRIS P1 BASIC12.77□□□□□ -0.37
HIST1H2ACQ93077 BRWD1P1-201ENST00000401091 371 ntBASIC12.77□□□□□ -0.37
HIST1H2ACQ93077 KRTAP10-13P-201ENST00000412914 571 ntBASIC12.77□□□□□ -0.37
HIST1H2ACQ93077 Z82188.2-201ENST00000419128 630 ntTSL 5 BASIC12.77□□□□□ -0.37
HIST1H2ACQ93077 OGFR-AS1-201ENST00000431361 668 ntTSL 2 BASIC12.77□□□□□ -0.37
HIST1H2ACQ93077 LAMA4-208ENST00000431543 1080 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
HIST1H2ACQ93077 AL450003.2-201ENST00000450445 428 ntTSL 5 BASIC12.77□□□□□ -0.37
HIST1H2ACQ93077 RN7SL530P-201ENST00000485097 298 ntBASIC12.77□□□□□ -0.37
HIST1H2ACQ93077 AL356756.1-201ENST00000550941 551 ntTSL 3 BASIC12.77□□□□□ -0.37
HIST1H2ACQ93077 XRCC3-210ENST00000554974 575 ntTSL 4 BASIC12.77□□□□□ -0.37
HIST1H2ACQ93077 AC025259.3-202ENST00000564363 687 ntTSL 2 BASIC12.77□□□□□ -0.37
HIST1H2ACQ93077 SNORD3B-2-202ENST00000571722 791 ntBASIC12.77□□□□□ -0.37
HIST1H2ACQ93077 AL132994.2-201ENST00000603120 687 ntBASIC12.77□□□□□ -0.37
HIST1H2ACQ93077 ADH5-213ENST00000626055 1299 ntTSL 5 BASIC12.77□□□□□ -0.37
HIST1H2ACQ93077 PDE8B-205ENST00000346042 3276 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
HIST1H2ACQ93077 OFD1-202ENST00000380550 3296 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
HIST1H2ACQ93077 SLC35G1-201ENST00000371408 3490 ntAPPRIS P3 TSL 2 BASIC12.77□□□□□ -0.37
HIST1H2ACQ93077 SMIM12-206ENST00000521580 3454 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
HIST1H2ACQ93077 PSAP-202ENST00000394936 2872 ntAPPRIS P2 TSL 1 (best) BASIC12.77□□□□□ -0.37
HIST1H2ACQ93077 ACO1-203ENST00000541043 3618 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.37
HIST1H2ACQ93077 ERLIN1-202ENST00000407654 1453 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
HIST1H2ACQ93077 CDCA7-203ENST00000410019 1488 ntTSL 2 BASIC12.77□□□□□ -0.37
HIST1H2ACQ93077 BEND7-201ENST00000341083 2239 ntAPPRIS P3 TSL 2 BASIC12.77□□□□□ -0.37
HIST1H2ACQ93077 XKRX-202ENST00000468904 2249 ntTSL 2 BASIC12.77□□□□□ -0.37
HIST1H2ACQ93077 THEMIS2-201ENST00000328928 2337 ntTSL 2 BASIC12.77□□□□□ -0.37
HIST1H2ACQ93077 KIF21B-204ENST00000461742 5428 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
HIST1H2ACQ93077 UBN1-202ENST00000396658 6336 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
HIST1H2ACQ93077 SCFD1-203ENST00000458591 2359 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
HIST1H2ACQ93077 RPL15-213ENST00000611050 2363 ntAPPRIS P1 TSL 4 BASIC12.77□□□□□ -0.37
HIST1H2ACQ93077 CREBZF-204ENST00000527447 4037 ntAPPRIS P1 BASIC12.77□□□□□ -0.37
HIST1H2ACQ93077 REC8-213ENST00000620473 2405 ntAPPRIS P1 TSL 2 BASIC12.77□□□□□ -0.37
HIST1H2ACQ93077 ARFIP1-203ENST00000405727 1601 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
HIST1H2ACQ93077 LIMS2-206ENST00000409754 1620 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
HIST1H2ACQ93077 ELP4-228ENST00000640954 1612 ntTSL 5 BASIC12.77□□□□□ -0.37
HIST1H2ACQ93077 PPHLN1-206ENST00000395580 1693 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.37
HIST1H2ACQ93077 KIRREL3-205ENST00000529097 3397 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
HIST1H2ACQ93077 RASGEF1B-202ENST00000335927 1756 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
HIST1H2ACQ93077 GABRB2-205ENST00000517901 1779 ntTSL 5 BASIC12.76□□□□□ -0.37
HIST1H2ACQ93077 CENPBD1-201ENST00000314994 2744 ntAPPRIS P1 BASIC12.76□□□□□ -0.37
HIST1H2ACQ93077 C3orf33-205ENST00000534941 1804 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
HIST1H2ACQ93077 EEF2K-201ENST00000263026 7388 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
HIST1H2ACQ93077 RBBP8NL-201ENST00000252998 2793 ntAPPRIS P1 TSL 2 BASIC12.76□□□□□ -0.37
HIST1H2ACQ93077 TMBIM6-217ENST00000549385 2771 ntAPPRIS P3 TSL 5 BASIC12.76□□□□□ -0.37
HIST1H2ACQ93077 IL12RB1-203ENST00000593993 2782 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
HIST1H2ACQ93077 ZC3H18-201ENST00000301011 3729 ntAPPRIS P2 TSL 1 (best) BASIC12.76□□□□□ -0.37
HIST1H2ACQ93077 CCDC86-201ENST00000227520 1893 ntAPPRIS P2 TSL 1 (best) BASIC12.76□□□□□ -0.37
HIST1H2ACQ93077 ACTN1-205ENST00000538545 2813 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
HIST1H2ACQ93077 CHRND-206ENST00000543200 2918 ntTSL 2 BASIC12.76□□□□□ -0.37
HIST1H2ACQ93077 TRMT10B-202ENST00000377753 2027 ntTSL 2 BASIC12.76□□□□□ -0.37
HIST1H2ACQ93077 SNX19-211ENST00000533214 3096 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
HIST1H2ACQ93077 CUL2-210ENST00000626172 4115 ntTSL 5 BASIC12.76□□□□□ -0.37
HIST1H2ACQ93077 AC135782.3-201ENST00000562782 2105 ntBASIC12.76□□□□□ -0.37
HIST1H2ACQ93077 COL6A1-207ENST00000612273 3251 ntAPPRIS ALT2 TSL 5 BASIC12.76□□□□□ -0.37
HIST1H2ACQ93077 USP20-202ENST00000358355 4371 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
HIST1H2ACQ93077 BCAP29-201ENST00000005259 4572 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
HIST1H2ACQ93077 KRT17P5-203ENST00000445433 2333 ntTSL 2 BASIC12.76□□□□□ -0.37
HIST1H2ACQ93077 PTPRN2-202ENST00000389416 4692 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
HIST1H2ACQ93077 GNAS-213ENST00000371099 3709 ntTSL 5 BASIC12.76□□□□□ -0.37
HIST1H2ACQ93077 HPS1-215ENST00000613394 3714 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
HIST1H2ACQ93077 C8orf74-201ENST00000304519 1036 ntAPPRIS P2 TSL 1 (best) BASIC12.76□□□□□ -0.37
HIST1H2ACQ93077 PAX4-201ENST00000338516 1085 ntAPPRIS ALT2 TSL 5 BASIC12.76□□□□□ -0.37
HIST1H2ACQ93077 ERCC1-203ENST00000340192 949 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
HIST1H2ACQ93077 NAA10-201ENST00000370009 837 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
HIST1H2ACQ93077 NAA10-203ENST00000370015 1002 ntTSL 5 BASIC12.76□□□□□ -0.37
HIST1H2ACQ93077 ADARB2-AS1-201ENST00000381301 625 ntTSL 2 BASIC12.76□□□□□ -0.37
HIST1H2ACQ93077 OSM-202ENST00000403389 1000 ntAPPRIS ALT2 TSL 3 BASIC12.76□□□□□ -0.37
HIST1H2ACQ93077 MRPS25-203ENST00000444840 1281 ntTSL 2 BASIC12.76□□□□□ -0.37
HIST1H2ACQ93077 SERPINA13P-202ENST00000478994 924 ntBASIC12.76□□□□□ -0.37
HIST1H2ACQ93077 AC126915.1-201ENST00000522847 1038 ntBASIC12.76□□□□□ -0.37
HIST1H2ACQ93077 WDYHV1-206ENST00000523356 869 ntTSL 3 BASIC12.76□□□□□ -0.37
HIST1H2ACQ93077 IL32-232ENST00000552356 623 ntAPPRIS ALT2 TSL 3 BASIC12.76□□□□□ -0.37
HIST1H2ACQ93077 AL583810.1-201ENST00000553344 1045 ntBASIC12.76□□□□□ -0.37
HIST1H2ACQ93077 AL132639.2-202ENST00000553520 467 ntTSL 2 BASIC12.76□□□□□ -0.37
HIST1H2ACQ93077 CRISPLD2-210ENST00000569090 808 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
HIST1H2ACQ93077 TECR-207ENST00000596073 1170 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
HIST1H2ACQ93077 PRKN-211ENST00000615065 261 ntTSL 5 BASIC12.76□□□□□ -0.37
HIST1H2ACQ93077 AC006453.2-202ENST00000635968 827 ntTSL 5 BASIC12.76□□□□□ -0.37
Retrieved 100 of 98,524 protein–RNA pairs in 58.7 ms