Protein–RNA interactions for Protein: Q9UBB6

NCDN, Neurochondrin, humanhuman

Predictions only

Length 729 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCDNQ9UBB6 USP28-214ENST00000545540 3431 ntTSL 2 BASIC13.78□□□□□ -0.2
NCDNQ9UBB6 GRK6P1-201ENST00000400595 1711 ntBASIC13.78□□□□□ -0.2
NCDNQ9UBB6 PAX7-202ENST00000400661 1700 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
NCDNQ9UBB6 AKAP2-203ENST00000434623 4400 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
NCDNQ9UBB6 UCKL1-AS1-201ENST00000623569 3602 ntBASIC13.78□□□□□ -0.2
NCDNQ9UBB6 USP3-204ENST00000540797 5474 ntTSL 2 BASIC13.78□□□□□ -0.2
NCDNQ9UBB6 LRRFIP1-202ENST00000289175 3709 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
NCDNQ9UBB6 TNFRSF11A-206ENST00000617039 3756 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
NCDNQ9UBB6 MFSD13A-201ENST00000238936 2852 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
NCDNQ9UBB6 IL1RN-203ENST00000361779 1922 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
NCDNQ9UBB6 FAM46C-201ENST00000369448 5751 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
NCDNQ9UBB6 TRMT2B-201ENST00000372935 2921 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
NCDNQ9UBB6 TMEM41B-204ENST00000528080 3968 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
NCDNQ9UBB6 LINC01010-201ENST00000431422 2069 ntTSL 2 BASIC13.78□□□□□ -0.2
NCDNQ9UBB6 MICAL1-201ENST00000358577 3142 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
NCDNQ9UBB6 C7orf57-201ENST00000348904 2125 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
NCDNQ9UBB6 MDM1-205ENST00000430606 2170 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
NCDNQ9UBB6 DNAJB1-201ENST00000254322 2264 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
NCDNQ9UBB6 CCDC116-201ENST00000292779 2260 ntAPPRIS P2 TSL 1 (best) BASIC13.78□□□□□ -0.2
NCDNQ9UBB6 NOP9-201ENST00000267425 6033 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
NCDNQ9UBB6 SCAP-206ENST00000428413 3749 ntTSL 5 BASIC13.78□□□□□ -0.2
NCDNQ9UBB6 BLVRA-201ENST00000265523 1071 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
NCDNQ9UBB6 EXOSC7-201ENST00000265564 1055 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
NCDNQ9UBB6 FLAD1-202ENST00000295530 1211 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
NCDNQ9UBB6 AC026884.1-201ENST00000418296 457 ntBASIC13.78□□□□□ -0.2
NCDNQ9UBB6 AL359458.1-201ENST00000430821 400 ntTSL 3 BASIC13.78□□□□□ -0.2
NCDNQ9UBB6 AP000640.1-201ENST00000525337 879 ntTSL 2 BASIC13.78□□□□□ -0.2
NCDNQ9UBB6 AL512356.1-201ENST00000548203 535 ntTSL 3 BASIC13.78□□□□□ -0.2
NCDNQ9UBB6 RORA-AS1-202ENST00000558140 869 ntTSL 2 BASIC13.78□□□□□ -0.2
NCDNQ9UBB6 SMIM28-201ENST00000573100 855 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
NCDNQ9UBB6 ZNF571-AS1-204ENST00000587121 822 ntTSL 3 BASIC13.78□□□□□ -0.2
NCDNQ9UBB6 AC011483.3-201ENST00000601506 826 ntTSL 3 BASIC13.78□□□□□ -0.2
NCDNQ9UBB6 PRR20FP-201ENST00000603320 180 ntBASIC13.78□□□□□ -0.2
NCDNQ9UBB6 RDM1-216ENST00000613308 779 ntAPPRIS ALT2 TSL 3 BASIC13.78□□□□□ -0.2
NCDNQ9UBB6 HIST1H3B-201ENST00000621411 411 ntAPPRIS P1 BASIC13.78□□□□□ -0.2
NCDNQ9UBB6 ADH1B-207ENST00000639454 1210 ntTSL 5 BASIC13.78□□□□□ -0.2
NCDNQ9UBB6 LINC00115-201ENST00000473798 1317 ntBASIC13.78□□□□□ -0.2
NCDNQ9UBB6 KIF3C-201ENST00000264712 5344 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
NCDNQ9UBB6 DBR1-201ENST00000260803 2666 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
NCDNQ9UBB6 GALNT4-201ENST00000529983 5399 ntAPPRIS P1 BASIC13.78□□□□□ -0.2
NCDNQ9UBB6 TTC23L-203ENST00000505624 1353 ntAPPRIS P2 TSL 1 (best) BASIC13.78□□□□□ -0.2
NCDNQ9UBB6 SLC35A3-209ENST00000638338 2890 ntTSL 5 BASIC13.78□□□□□ -0.2
NCDNQ9UBB6 C21orf58-204ENST00000397682 2941 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
NCDNQ9UBB6 STAM-202ENST00000377524 2972 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
NCDNQ9UBB6 NXPH3-202ENST00000513748 1530 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
NCDNQ9UBB6 ACSL3-202ENST00000392066 3147 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
NCDNQ9UBB6 CLUAP1-201ENST00000341633 1643 ntTSL 5 BASIC13.78□□□□□ -0.2
NCDNQ9UBB6 ILDR1-205ENST00000462014 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
NCDNQ9UBB6 RFX8-201ENST00000428343 1686 ntAPPRIS P1 TSL 2 BASIC13.78□□□□□ -0.2
NCDNQ9UBB6 MCRS1-203ENST00000546244 1686 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
NCDNQ9UBB6 GOLGA8R-201ENST00000327271 1896 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
NCDNQ9UBB6 ADAM33-206ENST00000617732 1971 ntTSL 5 BASIC13.78□□□□□ -0.2
NCDNQ9UBB6 INO80-202ENST00000401393 5991 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
NCDNQ9UBB6 ATXN2L-202ENST00000336783 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
NCDNQ9UBB6 LINC00910-206ENST00000592135 2438 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
NCDNQ9UBB6 SPPL2B-207ENST00000610743 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
NCDNQ9UBB6 NEIL2-201ENST00000284503 2671 ntAPPRIS P1 TSL 2 BASIC13.77□□□□□ -0.2
NCDNQ9UBB6 MTA3-203ENST00000406652 5484 ntTSL 1 (best) BASIC13.77□□□□□ -0.2
NCDNQ9UBB6 LINC00667-206ENST00000582363 2935 ntTSL 2 BASIC13.77□□□□□ -0.2
NCDNQ9UBB6 AC007743.1-201ENST00000596663 3075 ntTSL 2 BASIC13.77□□□□□ -0.2
NCDNQ9UBB6 ATXN10-202ENST00000381061 3135 ntTSL 2 BASIC13.77□□□□□ -0.2
NCDNQ9UBB6 RUNDC1-201ENST00000361677 3828 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
NCDNQ9UBB6 ENDOD1-201ENST00000278505 4687 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
NCDNQ9UBB6 EPB41L3-201ENST00000341928 4706 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.2
NCDNQ9UBB6 KDM2B-201ENST00000377069 5224 ntAPPRIS ALT2 TSL 2 BASIC13.77□□□□□ -0.2
NCDNQ9UBB6 POLR2G-201ENST00000301788 827 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
NCDNQ9UBB6 LGALS4-201ENST00000307751 1535 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
NCDNQ9UBB6 NSMCE1-201ENST00000361439 1067 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
NCDNQ9UBB6 G0S2-201ENST00000367029 866 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
NCDNQ9UBB6 OLFML2B-202ENST00000367938 1153 ntTSL 2 BASIC13.77□□□□□ -0.21
NCDNQ9UBB6 TMEM14B-201ENST00000379530 787 ntTSL 2 BASIC13.77□□□□□ -0.21
NCDNQ9UBB6 MTA1-202ENST00000405646 2709 ntAPPRIS ALT2 TSL 5 BASIC13.77□□□□□ -0.21
NCDNQ9UBB6 RN7SKP212-201ENST00000410851 328 ntBASIC13.77□□□□□ -0.21
NCDNQ9UBB6 HLA-DMB-258ENST00000418107 1397 ntAPPRIS P1 BASIC13.77□□□□□ -0.21
NCDNQ9UBB6 SAPCD1-AS1-202ENST00000419679 461 ntTSL 3 BASIC13.77□□□□□ -0.21
NCDNQ9UBB6 CBR3-AS1-202ENST00000427491 741 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
NCDNQ9UBB6 AL022332.1-202ENST00000432495 426 ntTSL 3 BASIC13.77□□□□□ -0.21
NCDNQ9UBB6 IGHV3-43-201ENST00000434710 434 ntAPPRIS P1 BASIC13.77□□□□□ -0.21
NCDNQ9UBB6 AL137026.2-201ENST00000437014 841 ntTSL 2 BASIC13.77□□□□□ -0.21
NCDNQ9UBB6 CNMD-203ENST00000448904 1444 ntAPPRIS ALT1 TSL 1 (best) BASIC13.77□□□□□ -0.21
NCDNQ9UBB6 AL358216.1-201ENST00000451601 1657 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
NCDNQ9UBB6 AC117834.1-201ENST00000523197 602 ntTSL 4 BASIC13.77□□□□□ -0.21
NCDNQ9UBB6 C1orf198-207ENST00000523410 1041 ntAPPRIS ALT2 TSL 2 BASIC13.77□□□□□ -0.21
NCDNQ9UBB6 ALG1-204ENST00000588623 2671 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
NCDNQ9UBB6 AC007193.3-201ENST00000598616 188 ntTSL 3 BASIC13.77□□□□□ -0.21
NCDNQ9UBB6 HCG18-241ENST00000602290 821 ntTSL 2 BASIC13.77□□□□□ -0.21
NCDNQ9UBB6 CBR3-AS1-207ENST00000608641 777 ntTSL 5 BASIC13.77□□□□□ -0.21
NCDNQ9UBB6 SRP19-208ENST00000621420 1270 ntTSL 3 BASIC13.77□□□□□ -0.21
NCDNQ9UBB6 NFIC-206ENST00000589123 8068 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
NCDNQ9UBB6 IGSF1-204ENST00000370903 4594 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
NCDNQ9UBB6 GTF2I-212ENST00000573035 4548 ntAPPRIS P4 TSL 1 (best) BASIC13.77□□□□□ -0.21
NCDNQ9UBB6 FGD5-AS1-202ENST00000424349 3792 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
NCDNQ9UBB6 KCNT1-208ENST00000488444 3696 ntAPPRIS ALT2 TSL 5 BASIC13.77□□□□□ -0.21
NCDNQ9UBB6 TRAPPC8-210ENST00000582513 3205 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
NCDNQ9UBB6 PPFIA4-203ENST00000367240 6434 ntAPPRIS P5 TSL 5 BASIC13.77□□□□□ -0.21
NCDNQ9UBB6 SHC1-204ENST00000368450 3059 ntAPPRIS ALT1 TSL 1 (best) BASIC13.77□□□□□ -0.21
NCDNQ9UBB6 SHC1-205ENST00000368453 3062 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.21
NCDNQ9UBB6 PKN1-202ENST00000342216 2960 ntTSL 2 BASIC13.77□□□□□ -0.21
NCDNQ9UBB6 DUS4L-201ENST00000265720 2220 ntAPPRIS P1 TSL 2 BASIC13.76□□□□□ -0.21
NCDNQ9UBB6 FAM86C1-201ENST00000346333 2010 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 268.7 ms