Protein–RNA interactions for Protein: Q9BZ76

CNTNAP3, Contactin-associated protein-like 3, humanhuman

Predictions only

Length 1,288 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP3Q9BZ76 TRIQK-219ENST00000523580 1630 ntTSL 2 BASIC13.3□□□□□ -0.28
CNTNAP3Q9BZ76 DMTN-203ENST00000381470 2601 ntTSL 5 BASIC13.3□□□□□ -0.28
CNTNAP3Q9BZ76 MAP3K4-201ENST00000348824 5295 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
CNTNAP3Q9BZ76 CDH23-202ENST00000299366 3954 ntTSL 5 BASIC13.3□□□□□ -0.28
CNTNAP3Q9BZ76 GAPDH-205ENST00000396861 1348 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
CNTNAP3Q9BZ76 UPF3B-202ENST00000345865 2335 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
CNTNAP3Q9BZ76 TGIF2-202ENST00000373874 3432 ntAPPRIS P1 TSL 2 BASIC13.3□□□□□ -0.28
CNTNAP3Q9BZ76 CACNB4-201ENST00000201943 1389 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
CNTNAP3Q9BZ76 SERHL2-201ENST00000327678 1374 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
CNTNAP3Q9BZ76 MN1-201ENST00000302326 7556 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
CNTNAP3Q9BZ76 CNTNAP2-225ENST00000639247 2064 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
CNTNAP3Q9BZ76 CEP78-203ENST00000376598 2404 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
CNTNAP3Q9BZ76 MEOX1-202ENST00000329168 2129 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
CNTNAP3Q9BZ76 RGS6-217ENST00000555571 1764 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
CNTNAP3Q9BZ76 ELMO3-202ENST00000393997 2531 ntAPPRIS P2 TSL 2 BASIC13.3□□□□□ -0.28
CNTNAP3Q9BZ76 LINC00926-201ENST00000501726 2530 ntTSL 2 BASIC13.3□□□□□ -0.28
CNTNAP3Q9BZ76 PHF10-205ENST00000612128 4395 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
CNTNAP3Q9BZ76 CNDP1-201ENST00000358821 2215 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
CNTNAP3Q9BZ76 TTC29-208ENST00000513335 2226 ntAPPRIS ALT2 TSL 2 BASIC13.29□□□□□ -0.28
CNTNAP3Q9BZ76 HYAL1-209ENST00000618175 2225 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
CNTNAP3Q9BZ76 KYAT1-201ENST00000302586 1903 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
CNTNAP3Q9BZ76 CALR-201ENST00000316448 1903 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
CNTNAP3Q9BZ76 AP000552.1-203ENST00000416615 1930 ntTSL 5 BASIC13.29□□□□□ -0.28
CNTNAP3Q9BZ76 RBM46-204ENST00000514866 2315 ntTSL 2 BASIC13.29□□□□□ -0.28
CNTNAP3Q9BZ76 KATNA1-203ENST00000367411 1984 ntAPPRIS P1 TSL 2 BASIC13.29□□□□□ -0.28
CNTNAP3Q9BZ76 AC112693.3-201ENST00000624819 1983 ntBASIC13.29□□□□□ -0.28
CNTNAP3Q9BZ76 ZNF618-201ENST00000288466 9109 ntAPPRIS P3 TSL 2 BASIC13.29□□□□□ -0.28
CNTNAP3Q9BZ76 DDX19B-213ENST00000568625 1681 ntTSL 2 BASIC13.29□□□□□ -0.28
CNTNAP3Q9BZ76 RPS6-201ENST00000315377 863 ntTSL 3 BASIC13.29□□□□□ -0.28
CNTNAP3Q9BZ76 FAM149A-202ENST00000356371 2997 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
CNTNAP3Q9BZ76 NME2-201ENST00000393183 568 ntTSL 2 BASIC13.29□□□□□ -0.28
CNTNAP3Q9BZ76 SNORD88B-201ENST00000408454 91 ntBASIC13.29□□□□□ -0.28
CNTNAP3Q9BZ76 ZNF877P-201ENST00000437614 612 ntBASIC13.29□□□□□ -0.28
CNTNAP3Q9BZ76 Z69733.1-201ENST00000445990 632 ntTSL 3 BASIC13.29□□□□□ -0.28
CNTNAP3Q9BZ76 RN7SL33P-201ENST00000462543 342 ntBASIC13.29□□□□□ -0.28
CNTNAP3Q9BZ76 PRSS3P1-201ENST00000503996 742 ntBASIC13.29□□□□□ -0.28
CNTNAP3Q9BZ76 LINC02435-201ENST00000508291 584 ntTSL 3 BASIC13.29□□□□□ -0.28
CNTNAP3Q9BZ76 AC137579.2-201ENST00000517714 551 ntTSL 4 BASIC13.29□□□□□ -0.28
CNTNAP3Q9BZ76 AACSP1-202ENST00000521412 1095 ntBASIC13.29□□□□□ -0.28
CNTNAP3Q9BZ76 IMMP1L-213ENST00000533642 314 ntTSL 2 BASIC13.29□□□□□ -0.28
CNTNAP3Q9BZ76 ZNF816-208ENST00000535506 529 ntTSL 4 BASIC13.29□□□□□ -0.28
CNTNAP3Q9BZ76 BATF-202ENST00000555504 361 ntTSL 2 BASIC13.29□□□□□ -0.28
CNTNAP3Q9BZ76 NPTN-205ENST00000563691 1214 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
CNTNAP3Q9BZ76 AC010551.3-201ENST00000563772 463 ntTSL 5 BASIC13.29□□□□□ -0.28
CNTNAP3Q9BZ76 BMS1P8-203ENST00000567036 614 ntTSL 3 BASIC13.29□□□□□ -0.28
CNTNAP3Q9BZ76 NDUFB10P1-201ENST00000567319 521 ntBASIC13.29□□□□□ -0.28
CNTNAP3Q9BZ76 MIR4309-201ENST00000582498 83 ntBASIC13.29□□□□□ -0.28
CNTNAP3Q9BZ76 FXYD3-210ENST00000604621 548 ntAPPRIS P1 TSL 2 BASIC13.29□□□□□ -0.28
CNTNAP3Q9BZ76 NEK5-204ENST00000617045 2127 ntAPPRIS P1 TSL 2 BASIC13.29□□□□□ -0.28
CNTNAP3Q9BZ76 AC091769.1-201ENST00000619576 568 ntBASIC13.29□□□□□ -0.28
CNTNAP3Q9BZ76 AC026336.4-201ENST00000624565 1050 ntBASIC13.29□□□□□ -0.28
CNTNAP3Q9BZ76 AAAS-202ENST00000394384 1703 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
CNTNAP3Q9BZ76 SPIN3-204ENST00000638257 4835 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
CNTNAP3Q9BZ76 PPP1R26P4-201ENST00000619065 3527 ntBASIC13.29□□□□□ -0.28
CNTNAP3Q9BZ76 BUD13-202ENST00000375445 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
CNTNAP3Q9BZ76 RIOX2-202ENST00000360258 2232 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
CNTNAP3Q9BZ76 PHYH-203ENST00000396920 1829 ntTSL 5 BASIC13.29□□□□□ -0.28
CNTNAP3Q9BZ76 NEAT1-201ENST00000499732 1811 ntTSL 2 BASIC13.29□□□□□ -0.28
CNTNAP3Q9BZ76 GPRASP1-205ENST00000537097 5980 ntAPPRIS P1 TSL 2 BASIC13.29□□□□□ -0.28
CNTNAP3Q9BZ76 MSH5-203ENST00000375750 2775 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
CNTNAP3Q9BZ76 PAK1-210ENST00000528203 1878 ntTSL 2 BASIC13.29□□□□□ -0.28
CNTNAP3Q9BZ76 C2orf54-202ENST00000388934 1911 ntAPPRIS P4 TSL 2 BASIC13.29□□□□□ -0.28
CNTNAP3Q9BZ76 C9orf47-201ENST00000334490 4829 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
CNTNAP3Q9BZ76 PCM1-201ENST00000325083 6820 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
CNTNAP3Q9BZ76 COMMD10-201ENST00000274458 1469 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
CNTNAP3Q9BZ76 HGNC:24955-201ENST00000303177 2452 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
CNTNAP3Q9BZ76 CNBP-205ENST00000500450 1516 ntTSL 2 BASIC13.29□□□□□ -0.28
CNTNAP3Q9BZ76 GABRG3-208ENST00000615808 10768 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
CNTNAP3Q9BZ76 TM9SF1-202ENST00000396854 2055 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
CNTNAP3Q9BZ76 ATXN10-202ENST00000381061 3135 ntTSL 2 BASIC13.28□□□□□ -0.28
CNTNAP3Q9BZ76 CORO6-201ENST00000345068 2603 ntAPPRIS P2 TSL 5 BASIC13.28□□□□□ -0.28
CNTNAP3Q9BZ76 UCP2-201ENST00000310473 2113 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
CNTNAP3Q9BZ76 SPATA7-203ENST00000393545 2123 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
CNTNAP3Q9BZ76 ADAMTS13-205ENST00000371916 4330 ntTSL 5 BASIC13.28□□□□□ -0.28
CNTNAP3Q9BZ76 IVL-201ENST00000368764 2153 ntAPPRIS P1 TSL 2 BASIC13.28□□□□□ -0.28
CNTNAP3Q9BZ76 TAF6-201ENST00000344095 2727 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
CNTNAP3Q9BZ76 BHMG1-201ENST00000457052 2749 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
CNTNAP3Q9BZ76 FAM156A-206ENST00000612915 2233 ntAPPRIS P2 TSL 5 BASIC13.28□□□□□ -0.28
CNTNAP3Q9BZ76 AKNA-204ENST00000374075 5038 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
CNTNAP3Q9BZ76 SORCS1-201ENST00000263054 7272 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
CNTNAP3Q9BZ76 TMTC1-207ENST00000552618 3915 ntTSL 5 BASIC13.28□□□□□ -0.28
CNTNAP3Q9BZ76 BTNL8-206ENST00000508408 1717 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
CNTNAP3Q9BZ76 AC010255.3-203ENST00000509403 1727 ntAPPRIS P1 TSL 2 BASIC13.28□□□□□ -0.28
CNTNAP3Q9BZ76 EDEM2-201ENST00000374491 1756 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
CNTNAP3Q9BZ76 AKAP7-204ENST00000431975 2954 ntAPPRIS P1 TSL 2 BASIC13.28□□□□□ -0.28
CNTNAP3Q9BZ76 UBE4B-201ENST00000253251 4772 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
CNTNAP3Q9BZ76 TUSC3-201ENST00000382020 3683 ntAPPRIS ALT1 TSL 1 (best) BASIC13.28□□□□□ -0.28
CNTNAP3Q9BZ76 DMTN-205ENST00000432128 2508 ntTSL 5 BASIC13.28□□□□□ -0.28
CNTNAP3Q9BZ76 OR10K2-201ENST00000314902 939 ntAPPRIS P1 BASIC13.28□□□□□ -0.28
CNTNAP3Q9BZ76 DHRS7C-201ENST00000330255 1006 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
CNTNAP3Q9BZ76 OR2W3-201ENST00000360358 945 ntAPPRIS P1 BASIC13.28□□□□□ -0.28
CNTNAP3Q9BZ76 MIR766-201ENST00000390223 111 ntBASIC13.28□□□□□ -0.28
CNTNAP3Q9BZ76 CCL8-201ENST00000394620 1261 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
CNTNAP3Q9BZ76 RHOG-203ENST00000396979 1289 ntAPPRIS P1 TSL 3 BASIC13.28□□□□□ -0.28
CNTNAP3Q9BZ76 TLE1P1-201ENST00000422965 589 ntBASIC13.28□□□□□ -0.28
CNTNAP3Q9BZ76 AC138392.1-201ENST00000427577 921 ntBASIC13.28□□□□□ -0.28
CNTNAP3Q9BZ76 AC007690.1-201ENST00000451924 468 ntBASIC13.28□□□□□ -0.28
CNTNAP3Q9BZ76 PSME2P2-201ENST00000453033 700 ntBASIC13.28□□□□□ -0.28
CNTNAP3Q9BZ76 LRRC75A-AS1-208ENST00000480811 968 ntTSL 2 BASIC13.28□□□□□ -0.28
CNTNAP3Q9BZ76 SOX2-OT-209ENST00000485035 561 ntTSL 4 BASIC13.28□□□□□ -0.28
Retrieved 100 of 98,524 protein–RNA pairs in 76.6 ms