Protein–RNA interactions for Protein: Q96BP2

CHCHD1, Coiled-coil-helix-coiled-coil-helix domain-containing protein 1, humanhuman

Known RBP Predictions only

Length 118 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD1Q96BP2 KCNH1-202ENST00000367007 3445 ntTSL 5 BASIC10.12□□□□□ -0.79
CHCHD1Q96BP2 MED16-204ENST00000395808 3420 ntAPPRIS ALT2 TSL 1 (best) BASIC10.12□□□□□ -0.79
CHCHD1Q96BP2 ATP2C1-221ENST00000513801 3439 ntTSL 1 (best) BASIC10.12□□□□□ -0.79
CHCHD1Q96BP2 CCNE1-202ENST00000357943 1641 ntTSL 1 (best) BASIC10.12□□□□□ -0.79
CHCHD1Q96BP2 CSPG4P12-201ENST00000558282 4853 ntBASIC10.12□□□□□ -0.79
CHCHD1Q96BP2 ZFYVE19-202ENST00000336455 1784 ntTSL 2 BASIC10.12□□□□□ -0.79
CHCHD1Q96BP2 TP53I11-203ENST00000395648 3381 ntAPPRIS P1 TSL 2 BASIC10.12□□□□□ -0.79
CHCHD1Q96BP2 SLC5A11-211ENST00000569071 1919 ntTSL 5 BASIC10.12□□□□□ -0.79
CHCHD1Q96BP2 HINT1-201ENST00000304043 1081 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
CHCHD1Q96BP2 VAMP5-201ENST00000306384 689 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
CHCHD1Q96BP2 S100A16-202ENST00000368704 1146 ntAPPRIS P1 TSL 2 BASIC10.12□□□□□ -0.79
CHCHD1Q96BP2 S100A16-204ENST00000368706 1118 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
CHCHD1Q96BP2 KLF2P2-201ENST00000416807 1039 ntBASIC10.12□□□□□ -0.79
CHCHD1Q96BP2 AL135791.1-201ENST00000429214 826 ntTSL 5 BASIC10.12□□□□□ -0.79
CHCHD1Q96BP2 AC016683.1-202ENST00000438409 583 ntTSL 4 BASIC10.12□□□□□ -0.79
CHCHD1Q96BP2 AC093459.1-202ENST00000438963 768 ntTSL 3 BASIC10.12□□□□□ -0.79
CHCHD1Q96BP2 AKR1A1-204ENST00000471651 1018 ntTSL 1 (best) BASIC10.12□□□□□ -0.79
CHCHD1Q96BP2 RPL13AP25-201ENST00000484130 612 ntBASIC10.12□□□□□ -0.79
CHCHD1Q96BP2 PTPRVP-202ENST00000490575 953 ntTSL 5 BASIC10.12□□□□□ -0.79
CHCHD1Q96BP2 AC093827.2-201ENST00000512654 315 ntBASIC10.12□□□□□ -0.79
CHCHD1Q96BP2 RBPMS-AS1-202ENST00000519753 1031 ntTSL 5 BASIC10.12□□□□□ -0.79
CHCHD1Q96BP2 AC092718.3-202ENST00000564536 1032 ntAPPRIS P5 TSL 5 BASIC10.12□□□□□ -0.79
CHCHD1Q96BP2 POLR2E-204ENST00000586746 1096 ntAPPRIS P1 TSL 3 BASIC10.12□□□□□ -0.79
CHCHD1Q96BP2 MKNK2-212ENST00000591588 631 ntTSL 2 BASIC10.12□□□□□ -0.79
CHCHD1Q96BP2 CHMP2A-208ENST00000601220 885 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
CHCHD1Q96BP2 AL049840.4-201ENST00000602422 811 ntBASIC10.12□□□□□ -0.79
CHCHD1Q96BP2 TXNDC12-205ENST00000610127 806 ntTSL 2 BASIC10.12□□□□□ -0.79
CHCHD1Q96BP2 FOXP1-223ENST00000622151 429 ntTSL 3 BASIC10.12□□□□□ -0.79
CHCHD1Q96BP2 VPS51-217ENST00000639871 243 ntTSL 5 BASIC10.12□□□□□ -0.79
CHCHD1Q96BP2 SHANK2-211ENST00000449833 8850 ntTSL 5 BASIC10.12□□□□□ -0.79
CHCHD1Q96BP2 TTC4-201ENST00000371281 2395 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
CHCHD1Q96BP2 OSTM1-AS1-202ENST00000441184 3334 ntTSL 1 (best) BASIC10.12□□□□□ -0.79
CHCHD1Q96BP2 ACADL-201ENST00000233710 2543 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
CHCHD1Q96BP2 PBOV1-201ENST00000527246 2506 ntAPPRIS P1 BASIC10.12□□□□□ -0.79
CHCHD1Q96BP2 NOS3-203ENST00000461406 3644 ntTSL 2 BASIC10.12□□□□□ -0.79
CHCHD1Q96BP2 RCC1-201ENST00000373831 1577 ntTSL 1 (best) BASIC10.12□□□□□ -0.79
CHCHD1Q96BP2 PIM1-201ENST00000373509 2650 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
CHCHD1Q96BP2 IRS4-201ENST00000372129 3928 ntAPPRIS P1 BASIC10.12□□□□□ -0.79
CHCHD1Q96BP2 TGFBI-201ENST00000442011 2804 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
CHCHD1Q96BP2 ELP4-202ENST00000379163 1700 ntTSL 2 BASIC10.12□□□□□ -0.79
CHCHD1Q96BP2 ZNF148-205ENST00000484491 2952 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
CHCHD1Q96BP2 GOSR2-233ENST00000640068 3103 ntTSL 5 BASIC10.12□□□□□ -0.79
CHCHD1Q96BP2 NRXN1-233ENST00000630543 4500 ntTSL 5 BASIC10.12□□□□□ -0.79
CHCHD1Q96BP2 FP325332.1-201ENST00000624818 2045 ntBASIC10.12□□□□□ -0.79
CHCHD1Q96BP2 BCL2L11-223ENST00000622612 4995 ntTSL 5 BASIC10.12□□□□□ -0.79
CHCHD1Q96BP2 LRFN5-201ENST00000298119 3723 ntAPPRIS P3 TSL 1 (best) BASIC10.12□□□□□ -0.79
CHCHD1Q96BP2 MTUS2-206ENST00000612955 7430 ntAPPRIS ALT2 TSL 5 BASIC10.12□□□□□ -0.79
CHCHD1Q96BP2 SLA2-201ENST00000262866 2757 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
CHCHD1Q96BP2 DRC7-203ENST00000394337 2906 ntAPPRIS P3 TSL 1 (best) BASIC10.12□□□□□ -0.79
CHCHD1Q96BP2 EFHD1-204ENST00000410095 1538 ntTSL 1 (best) BASIC10.12□□□□□ -0.79
CHCHD1Q96BP2 FAS-204ENST00000355740 2563 ntAPPRIS P4 TSL 1 (best) BASIC10.12□□□□□ -0.79
CHCHD1Q96BP2 AC106865.1-201ENST00000602666 3034 ntTSL 1 (best) BASIC10.12□□□□□ -0.79
CHCHD1Q96BP2 FGFR1OP-207ENST00000622353 3451 ntTSL 2 BASIC10.12□□□□□ -0.79
CHCHD1Q96BP2 PPP1R26P1-201ENST00000474415 3613 ntBASIC10.12□□□□□ -0.79
CHCHD1Q96BP2 LINC01134-202ENST00000439488 1940 ntTSL 1 (best) BASIC10.11□□□□□ -0.79
CHCHD1Q96BP2 GALT-201ENST00000378842 1768 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
CHCHD1Q96BP2 WDR83-201ENST00000418543 1457 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
CHCHD1Q96BP2 LAP3P2-201ENST00000454686 1454 ntBASIC10.11□□□□□ -0.79
CHCHD1Q96BP2 UVSSA-208ENST00000511563 1494 ntAPPRIS ALT2 TSL 2 BASIC10.11□□□□□ -0.79
CHCHD1Q96BP2 COX4I1-208ENST00000564903 1481 ntTSL 2 BASIC10.11□□□□□ -0.79
CHCHD1Q96BP2 LRTM2-208ENST00000543818 3986 ntAPPRIS P1 TSL 2 BASIC10.11□□□□□ -0.79
CHCHD1Q96BP2 AKAP8-201ENST00000269701 3670 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
CHCHD1Q96BP2 ZNF287-202ENST00000395825 3208 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
CHCHD1Q96BP2 CCDC88A-214ENST00000621814 3089 ntTSL 5 BASIC10.11□□□□□ -0.79
CHCHD1Q96BP2 EPB41L5-205ENST00000452780 6410 ntTSL 5 BASIC10.11□□□□□ -0.79
CHCHD1Q96BP2 CASC4-202ENST00000345795 3764 ntAPPRIS ALT1 TSL 1 (best) BASIC10.11□□□□□ -0.79
CHCHD1Q96BP2 GREM2-201ENST00000318160 4170 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
CHCHD1Q96BP2 OTOA-203ENST00000388957 2703 ntAPPRIS ALT2 TSL 2 BASIC10.11□□□□□ -0.79
CHCHD1Q96BP2 SLC6A7-201ENST00000230671 3739 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
CHCHD1Q96BP2 ZNF646-201ENST00000300850 6892 ntAPPRIS P2 TSL 1 (best) BASIC10.11□□□□□ -0.79
CHCHD1Q96BP2 LGALS12-202ENST00000340246 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC10.11□□□□□ -0.79
CHCHD1Q96BP2 LMF1-AS1-202ENST00000569574 1408 ntTSL 3 BASIC10.11□□□□□ -0.79
CHCHD1Q96BP2 UGGT2-203ENST00000376747 4832 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
CHCHD1Q96BP2 CLEC1B-201ENST00000298527 952 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
CHCHD1Q96BP2 SPACA4-201ENST00000321762 972 ntAPPRIS P1 BASIC10.11□□□□□ -0.79
CHCHD1Q96BP2 BEX3-203ENST00000372635 805 ntAPPRIS P1 TSL 2 BASIC10.11□□□□□ -0.79
CHCHD1Q96BP2 ACTG1P14-201ENST00000446382 1122 ntBASIC10.11□□□□□ -0.79
CHCHD1Q96BP2 AC012363.1-201ENST00000455707 575 ntTSL 4 BASIC10.11□□□□□ -0.79
CHCHD1Q96BP2 AC108047.1-201ENST00000457407 404 ntTSL 2 BASIC10.11□□□□□ -0.79
CHCHD1Q96BP2 PGAP2-206ENST00000459679 795 ntTSL 2 BASIC10.11□□□□□ -0.79
CHCHD1Q96BP2 AL133375.1-201ENST00000500590 980 ntTSL 5 BASIC10.11□□□□□ -0.79
CHCHD1Q96BP2 AC051649.1-201ENST00000509204 330 ntTSL 3 BASIC10.11□□□□□ -0.79
CHCHD1Q96BP2 SERF1A-207ENST00000512649 846 ntTSL 2 BASIC10.11□□□□□ -0.79
CHCHD1Q96BP2 AC021744.1-201ENST00000518354 453 ntTSL 3 BASIC10.11□□□□□ -0.79
CHCHD1Q96BP2 AL512361.1-201ENST00000554200 418 ntBASIC10.11□□□□□ -0.79
CHCHD1Q96BP2 LRRC28-210ENST00000558879 581 ntTSL 4 BASIC10.11□□□□□ -0.79
CHCHD1Q96BP2 ANP32AP1-202ENST00000560832 1074 ntTSL 1 (best) BASIC10.11□□□□□ -0.79
CHCHD1Q96BP2 AC051619.7-201ENST00000568314 623 ntBASIC10.11□□□□□ -0.79
CHCHD1Q96BP2 EGLN2-209ENST00000594140 991 ntTSL 2 BASIC10.11□□□□□ -0.79
CHCHD1Q96BP2 AC004466.1-201ENST00000599515 1080 ntBASIC10.11□□□□□ -0.79
CHCHD1Q96BP2 AL356740.1-201ENST00000602192 1297 ntBASIC10.11□□□□□ -0.79
CHCHD1Q96BP2 LINC01515-215ENST00000608678 854 ntTSL 5 BASIC10.11□□□□□ -0.79
CHCHD1Q96BP2 IFNLR1-201ENST00000327535 4549 ntAPPRIS P4 TSL 1 (best) BASIC10.11□□□□□ -0.79
CHCHD1Q96BP2 TUT1-202ENST00000308436 2826 ntAPPRIS P2 TSL 1 (best) BASIC10.11□□□□□ -0.79
CHCHD1Q96BP2 ACO2-202ENST00000396512 2811 ntTSL 5 BASIC10.11□□□□□ -0.79
CHCHD1Q96BP2 CPPED1-203ENST00000433677 1993 ntTSL 1 (best) BASIC10.11□□□□□ -0.79
CHCHD1Q96BP2 USP11-204ENST00000377107 3515 ntAPPRIS ALT2 TSL 1 (best) BASIC10.11□□□□□ -0.79
CHCHD1Q96BP2 PLEKHH1-201ENST00000329153 6604 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
CHCHD1Q96BP2 BEST1-208ENST00000534553 1829 ntTSL 2 BASIC10.11□□□□□ -0.79
CHCHD1Q96BP2 CTPS1-202ENST00000372621 3201 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Retrieved 100 of 98,524 protein–RNA pairs in 68.7 ms