Protein–RNA interactions for Protein: Q6NXT2

H3F3C, Histone H3.3C, humanhuman

Predictions only

Length 135 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3CQ6NXT2 AP003390.1-201ENST00000533253 523 ntTSL 5 BASIC12.92□□□□□ -0.34
H3F3CQ6NXT2 LINC01543-201ENST00000578367 900 ntTSL 5 BASIC12.92□□□□□ -0.34
H3F3CQ6NXT2 AC025048.2-201ENST00000590744 786 ntTSL 2 BASIC12.92□□□□□ -0.34
H3F3CQ6NXT2 RNASEK-210ENST00000593646 566 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
H3F3CQ6NXT2 AC002044.2-201ENST00000624910 970 ntBASIC12.92□□□□□ -0.34
H3F3CQ6NXT2 MTUS1-229ENST00000634613 1193 ntTSL 5 BASIC12.92□□□□□ -0.34
H3F3CQ6NXT2 MOCS3-201ENST00000244051 5106 ntAPPRIS P1 BASIC12.92□□□□□ -0.34
H3F3CQ6NXT2 DHX36-213ENST00000496811 6733 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
H3F3CQ6NXT2 ZNF576-201ENST00000336564 2566 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
H3F3CQ6NXT2 AC007240.1-201ENST00000641498 1996 ntAPPRIS P1 BASIC12.92□□□□□ -0.34
H3F3CQ6NXT2 ARHGAP10-201ENST00000336498 3299 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
H3F3CQ6NXT2 PCNA-202ENST00000379160 1359 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
H3F3CQ6NXT2 SLC25A3-216ENST00000551917 1359 ntAPPRIS P4 TSL 2 BASIC12.92□□□□□ -0.34
H3F3CQ6NXT2 PRMT3-202ENST00000331079 2653 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
H3F3CQ6NXT2 TNFRSF1B-201ENST00000376259 3683 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
H3F3CQ6NXT2 LOXL3-202ENST00000393937 2398 ntTSL 5 BASIC12.92□□□□□ -0.34
H3F3CQ6NXT2 ESPN-201ENST00000377828 3531 ntAPPRIS P2 TSL 1 (best) BASIC12.92□□□□□ -0.34
H3F3CQ6NXT2 CALCB-203ENST00000533448 2097 ntAPPRIS P1 TSL 2 BASIC12.92□□□□□ -0.34
H3F3CQ6NXT2 ITGB2-203ENST00000355153 2913 ntAPPRIS P1 TSL 2 BASIC12.92□□□□□ -0.34
H3F3CQ6NXT2 NEFH-201ENST00000310624 3783 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
H3F3CQ6NXT2 PGLYRP2-201ENST00000292609 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
H3F3CQ6NXT2 MAP3K4-204ENST00000392142 5490 ntAPPRIS P4 TSL 1 (best) BASIC12.92□□□□□ -0.34
H3F3CQ6NXT2 TPM2-204ENST00000378300 1771 ntTSL 3 BASIC12.92□□□□□ -0.34
H3F3CQ6NXT2 BIRC2-214ENST00000621637 3331 ntTSL 5 BASIC12.91□□□□□ -0.34
H3F3CQ6NXT2 UBTF-205ENST00000526094 2459 ntTSL 5 BASIC12.91□□□□□ -0.34
H3F3CQ6NXT2 MYLK-208ENST00000475616 5745 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
H3F3CQ6NXT2 ALDOA-204ENST00000412304 1603 ntAPPRIS P2 TSL 1 (best) BASIC12.91□□□□□ -0.34
H3F3CQ6NXT2 E2F7-202ENST00000416496 5297 ntTSL 5 BASIC12.91□□□□□ -0.34
H3F3CQ6NXT2 ZDHHC4-204ENST00000396709 1485 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
H3F3CQ6NXT2 CDCA7-203ENST00000410019 1488 ntTSL 2 BASIC12.91□□□□□ -0.34
H3F3CQ6NXT2 RCC2P1-201ENST00000452257 1476 ntBASIC12.91□□□□□ -0.34
H3F3CQ6NXT2 AC046130.1-201ENST00000501954 2179 ntTSL 5 BASIC12.91□□□□□ -0.34
H3F3CQ6NXT2 UNQ6494-202ENST00000617436 2163 ntTSL 2 BASIC12.91□□□□□ -0.34
H3F3CQ6NXT2 STK32B-201ENST00000282908 3582 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
H3F3CQ6NXT2 RGS3-208ENST00000394646 2716 ntTSL 2 BASIC12.91□□□□□ -0.34
H3F3CQ6NXT2 CRLS1-201ENST00000378863 3958 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
H3F3CQ6NXT2 C12orf65-204ENST00000429587 1326 ntAPPRIS P2 TSL 2 BASIC12.91□□□□□ -0.34
H3F3CQ6NXT2 NMNAT3-202ENST00000339837 1863 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
H3F3CQ6NXT2 SAR1A-204ENST00000373241 2996 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
H3F3CQ6NXT2 NR1H3-221ENST00000481889 1704 ntTSL 5 BASIC12.91□□□□□ -0.34
H3F3CQ6NXT2 PDHX-201ENST00000227868 2389 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
H3F3CQ6NXT2 VILL-202ENST00000383759 2787 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
H3F3CQ6NXT2 DTX3L-201ENST00000296161 5868 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
H3F3CQ6NXT2 LRRC8D-201ENST00000337338 3950 ntAPPRIS P1 TSL 2 BASIC12.91□□□□□ -0.34
H3F3CQ6NXT2 ANK1-203ENST00000314214 1185 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
H3F3CQ6NXT2 C7orf61-201ENST00000332375 1004 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
H3F3CQ6NXT2 CNR1-201ENST00000362094 1252 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
H3F3CQ6NXT2 IGHV3-49-201ENST00000390625 439 ntAPPRIS P1 BASIC12.91□□□□□ -0.34
H3F3CQ6NXT2 CXCL12-205ENST00000395794 1052 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
H3F3CQ6NXT2 OR2W2P-201ENST00000406313 909 ntBASIC12.91□□□□□ -0.34
H3F3CQ6NXT2 OR52M2P-201ENST00000414298 959 ntBASIC12.91□□□□□ -0.34
H3F3CQ6NXT2 AC092265.1-201ENST00000422638 498 ntTSL 2 BASIC12.91□□□□□ -0.34
H3F3CQ6NXT2 AL513211.1-201ENST00000429053 483 ntTSL 3 BASIC12.91□□□□□ -0.34
H3F3CQ6NXT2 PIN4P1-201ENST00000451079 396 ntBASIC12.91□□□□□ -0.34
H3F3CQ6NXT2 AC006529.1-201ENST00000459978 637 ntBASIC12.91□□□□□ -0.34
H3F3CQ6NXT2 AC005486.1-201ENST00000466775 216 ntTSL 3 BASIC12.91□□□□□ -0.34
H3F3CQ6NXT2 CD81-209ENST00000492627 886 ntTSL 3 BASIC12.91□□□□□ -0.34
H3F3CQ6NXT2 AC108199.1-201ENST00000504249 508 ntTSL 3 BASIC12.91□□□□□ -0.34
H3F3CQ6NXT2 ADM-203ENST00000525063 867 ntAPPRIS P1 TSL 3 BASIC12.91□□□□□ -0.34
H3F3CQ6NXT2 AC092139.2-201ENST00000563750 754 ntTSL 3 BASIC12.91□□□□□ -0.34
H3F3CQ6NXT2 AP001269.2-201ENST00000590055 379 ntTSL 3 BASIC12.91□□□□□ -0.34
H3F3CQ6NXT2 ST5-261ENST00000626808 1071 ntTSL 5 BASIC12.91□□□□□ -0.34
H3F3CQ6NXT2 DNAJC17-212ENST00000627802 428 ntTSL 4 BASIC12.91□□□□□ -0.34
H3F3CQ6NXT2 RBPJ-206ENST00000361572 1697 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
H3F3CQ6NXT2 CDH1-213ENST00000612417 2068 ntTSL 5 BASIC12.91□□□□□ -0.34
H3F3CQ6NXT2 SF1-201ENST00000227503 2850 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
H3F3CQ6NXT2 HMGA2-204ENST00000403681 4473 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
H3F3CQ6NXT2 SNPH-201ENST00000381867 5533 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
H3F3CQ6NXT2 RNF167-201ENST00000262482 1915 ntAPPRIS P3 TSL 2 BASIC12.91□□□□□ -0.34
H3F3CQ6NXT2 IFRD1-205ENST00000429071 1938 ntTSL 2 BASIC12.91□□□□□ -0.34
H3F3CQ6NXT2 DDX3X-201ENST00000399959 5399 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
H3F3CQ6NXT2 PHB-210ENST00000511832 1509 ntTSL 2 BASIC12.91□□□□□ -0.34
H3F3CQ6NXT2 CNN2-201ENST00000263097 2179 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
H3F3CQ6NXT2 EHD1-202ENST00000359393 3618 ntAPPRIS P1 TSL 2 BASIC12.91□□□□□ -0.34
H3F3CQ6NXT2 CNN2-205ENST00000562958 2194 ntTSL 2 BASIC12.91□□□□□ -0.34
H3F3CQ6NXT2 MBD6-201ENST00000355673 4282 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
H3F3CQ6NXT2 GOLGA8UP-201ENST00000527159 1755 ntBASIC12.91□□□□□ -0.34
H3F3CQ6NXT2 GOLGA8VP-201ENST00000559009 1798 ntBASIC12.91□□□□□ -0.34
H3F3CQ6NXT2 MYBPHL-201ENST00000357155 1372 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
H3F3CQ6NXT2 PIK3R5-216ENST00000584803 2653 ntAPPRIS ALT1 TSL 5 BASIC12.91□□□□□ -0.34
H3F3CQ6NXT2 ARRB1-202ENST00000420843 3336 ntAPPRIS ALT1 TSL 1 (best) BASIC12.91□□□□□ -0.34
H3F3CQ6NXT2 CEP128-201ENST00000216517 1606 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
H3F3CQ6NXT2 TMPRSS4-211ENST00000522307 1634 ntTSL 2 BASIC12.91□□□□□ -0.34
H3F3CQ6NXT2 CDCA7-202ENST00000347703 2500 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
H3F3CQ6NXT2 SLC6A6P1-201ENST00000413933 1850 ntBASIC12.91□□□□□ -0.34
H3F3CQ6NXT2 DSG1-202ENST00000462981 1857 ntTSL 2 BASIC12.91□□□□□ -0.34
H3F3CQ6NXT2 DHX16-202ENST00000376442 3445 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
H3F3CQ6NXT2 AC036214.1-201ENST00000502766 2126 ntTSL 2 BASIC12.91□□□□□ -0.34
H3F3CQ6NXT2 ZFP36L1-201ENST00000336440 3026 ntAPPRIS P1 TSL 2 BASIC12.91□□□□□ -0.34
H3F3CQ6NXT2 ADAMTS10-201ENST00000270328 4194 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
H3F3CQ6NXT2 AC025183.3-201ENST00000623526 1482 ntBASIC12.91□□□□□ -0.34
H3F3CQ6NXT2 FOXF1-201ENST00000262426 3516 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
H3F3CQ6NXT2 AL359881.3-201ENST00000602640 1721 ntBASIC12.91□□□□□ -0.34
H3F3CQ6NXT2 TLE1-203ENST00000376499 3893 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
H3F3CQ6NXT2 CTCFL-205ENST00000423479 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
H3F3CQ6NXT2 VGLL3-202ENST00000398399 10400 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.34
H3F3CQ6NXT2 TNFRSF1A-202ENST00000366159 1339 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
H3F3CQ6NXT2 TSPAN3-205ENST00000558745 1340 ntTSL 5 BASIC12.9□□□□□ -0.34
H3F3CQ6NXT2 SPATS2-203ENST00000547865 1810 ntTSL 2 BASIC12.9□□□□□ -0.34
H3F3CQ6NXT2 TBC1D3-201ENST00000620215 2063 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Retrieved 100 of 98,524 protein–RNA pairs in 39 ms