Protein–RNA interactions for Protein: P51686

CCR9, C-C chemokine receptor type 9, humanhuman

Predictions only

Length 369 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCR9P51686 AC237221.1-201ENST00000561575 1881 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
CCR9P51686 DNMT3B-206ENST00000456297 2315 ntTSL 2 BASIC12.33□□□□□ -0.44
CCR9P51686 UNK-205ENST00000589666 3925 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
CCR9P51686 INO80-202ENST00000401393 5991 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
CCR9P51686 TGM1-201ENST00000206765 2777 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
CCR9P51686 ZNF689-201ENST00000287461 3547 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
CCR9P51686 PASK-201ENST00000234040 4572 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.44
CCR9P51686 CNBP-203ENST00000446936 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC12.33□□□□□ -0.44
CCR9P51686 CNBP-204ENST00000451728 1641 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
CCR9P51686 DAO-201ENST00000228476 1756 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
CCR9P51686 GABRB2-205ENST00000517901 1779 ntTSL 5 BASIC12.33□□□□□ -0.44
CCR9P51686 ERAP1-201ENST00000296754 5495 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
CCR9P51686 MON1B-201ENST00000248248 6091 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
CCR9P51686 BRWD1-201ENST00000333229 10141 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
CCR9P51686 CDIP1-201ENST00000399599 3009 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
CCR9P51686 KLC2-206ENST00000417856 3015 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
CCR9P51686 RSPO2-202ENST00000517781 2748 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
CCR9P51686 MAP7-205ENST00000544465 2744 ntAPPRIS ALT2 TSL 2 BASIC12.32□□□□□ -0.44
CCR9P51686 SAP30BP-225ENST00000584667 2722 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
CCR9P51686 EFHC1-221ENST00000636489 2421 ntTSL 5 BASIC12.32□□□□□ -0.44
CCR9P51686 NBPF3-205ENST00000454000 2133 ntAPPRIS ALT2 TSL 2 BASIC12.32□□□□□ -0.44
CCR9P51686 GFRA2-202ENST00000517328 2104 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
CCR9P51686 MGRN1-211ENST00000588994 1665 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
CCR9P51686 CHD5-201ENST00000262450 9646 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
CCR9P51686 ABI2-201ENST00000261016 6634 ntTSL 2 BASIC12.32□□□□□ -0.44
CCR9P51686 ABI2-203ENST00000261018 6638 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
CCR9P51686 AL021155.1-201ENST00000438808 2637 ntBASIC12.32□□□□□ -0.44
CCR9P51686 MUC20-203ENST00000436408 2463 ntAPPRIS ALT2 TSL 5 BASIC12.32□□□□□ -0.44
CCR9P51686 STXBP6-202ENST00000396700 4021 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
CCR9P51686 ANKZF1-202ENST00000409849 2155 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
CCR9P51686 PRAM1-201ENST00000423345 2667 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
CCR9P51686 LINC00680-205ENST00000450081 1593 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
CCR9P51686 BRMS1-201ENST00000359957 1445 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
CCR9P51686 FP565260.6-203ENST00000620015 1435 ntTSL 3 BASIC12.32□□□□□ -0.44
CCR9P51686 CU639417.3-201ENST00000624240 1404 ntBASIC12.32□□□□□ -0.44
CCR9P51686 AC003958.1-201ENST00000435883 421 ntBASIC12.32□□□□□ -0.44
CCR9P51686 AC017116.1-201ENST00000445938 708 ntTSL 3 BASIC12.32□□□□□ -0.44
CCR9P51686 KRT17P7-201ENST00000451704 1104 ntBASIC12.32□□□□□ -0.44
CCR9P51686 ANAPC13-205ENST00000511751 896 ntAPPRIS P1 TSL 3 BASIC12.32□□□□□ -0.44
CCR9P51686 LINC01848-201ENST00000523446 518 ntTSL 3 BASIC12.32□□□□□ -0.44
CCR9P51686 AP003065.1-201ENST00000540912 562 ntTSL 4 BASIC12.32□□□□□ -0.44
CCR9P51686 GREM1-201ENST00000560677 623 ntTSL 4 BASIC12.32□□□□□ -0.44
CCR9P51686 AC132938.2-201ENST00000579188 680 ntBASIC12.32□□□□□ -0.44
CCR9P51686 ZNF772-207ENST00000601768 482 ntTSL 3 BASIC12.32□□□□□ -0.44
CCR9P51686 AL121944.1-201ENST00000605945 686 ntTSL 2 BASIC12.32□□□□□ -0.44
CCR9P51686 AL161773.1-201ENST00000624845 863 ntBASIC12.32□□□□□ -0.44
CCR9P51686 AL358472.5-202ENST00000641448 1267 ntBASIC12.32□□□□□ -0.44
CCR9P51686 MALL-201ENST00000272462 3061 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
CCR9P51686 IL10-202ENST00000423557 1630 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
CCR9P51686 YWHAZ-206ENST00000395957 5248 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
CCR9P51686 UBBP4-202ENST00000584755 1459 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
CCR9P51686 SLC38A5-213ENST00000620913 1993 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
CCR9P51686 RRBP1-206ENST00000455029 2485 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
CCR9P51686 DAXX-213ENST00000620164 2462 ntAPPRIS ALT2 TSL 5 BASIC12.32□□□□□ -0.44
CCR9P51686 WASHC1-201ENST00000442898 1827 ntAPPRIS P1 TSL 2 BASIC12.32□□□□□ -0.44
CCR9P51686 AL390066.1-201ENST00000456414 2302 ntTSL 2 BASIC12.32□□□□□ -0.44
CCR9P51686 SLC6A10P-201ENST00000330048 3846 ntTSL 2 BASIC12.32□□□□□ -0.44
CCR9P51686 PRDM10-202ENST00000358825 6322 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
CCR9P51686 PRDM10-203ENST00000360871 6301 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
CCR9P51686 RNF43-202ENST00000577625 2198 ntTSL 2 BASIC12.32□□□□□ -0.44
CCR9P51686 AC093462.1-201ENST00000621167 1683 ntBASIC12.32□□□□□ -0.44
CCR9P51686 NCSTN-202ENST00000368063 3031 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
CCR9P51686 MSRA-201ENST00000317173 1536 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
CCR9P51686 NAALADL1-201ENST00000340252 2376 ntTSL 5 BASIC12.32□□□□□ -0.44
CCR9P51686 TSPOAP1-201ENST00000268893 7483 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
CCR9P51686 TMC5-204ENST00000541464 3581 ntTSL 2 BASIC12.31□□□□□ -0.44
CCR9P51686 EDEM3-202ENST00000367512 6678 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
CCR9P51686 NCDN-201ENST00000356090 3433 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
CCR9P51686 AGL-203ENST00000361915 7368 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
CCR9P51686 SNX25-201ENST00000264694 3264 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
CCR9P51686 FBXL21-202ENST00000467490 1742 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
CCR9P51686 AC018629.1-201ENST00000623381 1736 ntBASIC12.31□□□□□ -0.44
CCR9P51686 FAM78A-203ENST00000372271 3966 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
CCR9P51686 AP4M1-204ENST00000421755 1572 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
CCR9P51686 RWDD4-205ENST00000510968 1551 ntTSL 4 BASIC12.31□□□□□ -0.44
CCR9P51686 EXOC3-201ENST00000315013 2682 ntAPPRIS P1 TSL 2 BASIC12.31□□□□□ -0.44
CCR9P51686 NAGK-202ENST00000418807 2343 ntTSL 5 BASIC12.31□□□□□ -0.44
CCR9P51686 ALG11-204ENST00000616513 1983 ntTSL 2 BASIC12.31□□□□□ -0.44
CCR9P51686 LINC00638-201ENST00000555578 2518 ntBASIC12.31□□□□□ -0.44
CCR9P51686 SRPRA-201ENST00000332118 3069 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
CCR9P51686 CDK5RAP1-203ENST00000357886 2164 ntTSL 5 BASIC12.31□□□□□ -0.44
CCR9P51686 CNTNAP1-201ENST00000264638 5276 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
CCR9P51686 AL513211.1-201ENST00000429053 483 ntTSL 3 BASIC12.31□□□□□ -0.44
CCR9P51686 HVCN1-203ENST00000439744 1215 ntTSL 2 BASIC12.31□□□□□ -0.44
CCR9P51686 RN7SL692P-201ENST00000464677 288 ntBASIC12.31□□□□□ -0.44
CCR9P51686 GNG4-205ENST00000484517 684 ntAPPRIS P1 TSL 2 BASIC12.31□□□□□ -0.44
CCR9P51686 CHCHD2P2-201ENST00000503744 321 ntBASIC12.31□□□□□ -0.44
CCR9P51686 AC055854.1-201ENST00000523627 570 ntTSL 4 BASIC12.31□□□□□ -0.44
CCR9P51686 MUTYH-237ENST00000531105 501 ntTSL 5 BASIC12.31□□□□□ -0.44
CCR9P51686 TGIF1-218ENST00000551402 1089 ntTSL 2 BASIC12.31□□□□□ -0.44
CCR9P51686 AC025154.1-201ENST00000552806 560 ntTSL 5 BASIC12.31□□□□□ -0.44
CCR9P51686 AL445483.1-201ENST00000568695 736 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
CCR9P51686 AC005391.1-201ENST00000613285 341 ntTSL 3 BASIC12.31□□□□□ -0.44
CCR9P51686 AC015967.2-201ENST00000624092 234 ntBASIC12.31□□□□□ -0.44
CCR9P51686 AC006435.4-201ENST00000625037 234 ntBASIC12.31□□□□□ -0.44
CCR9P51686 AL356737.1-201ENST00000634391 234 ntBASIC12.31□□□□□ -0.44
CCR9P51686 AL139424.3-202ENST00000641619 917 ntBASIC12.31□□□□□ -0.44
CCR9P51686 RARS2-201ENST00000369536 1818 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
CCR9P51686 DTX1-201ENST00000257600 3455 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
CCR9P51686 DHX37-201ENST00000308736 4550 ntAPPRIS P2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Retrieved 100 of 98,524 protein–RNA pairs in 60.2 ms