Protein–RNA interactions for Protein: P41273

TNFSF9, Tumor necrosis factor ligand superfamily member 9, humanhuman

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF9P41273 GULP1-204ENST00000409637 1242 ntTSL 2 BASIC14.99□□□□□ -0.01
TNFSF9P41273 AC012442.2-201ENST00000414784 425 ntTSL 2 BASIC14.99□□□□□ -0.01
TNFSF9P41273 AC073210.1-201ENST00000414799 232 ntBASIC14.99□□□□□ -0.01
TNFSF9P41273 PTGES3-203ENST00000436399 941 ntTSL 2 BASIC14.99□□□□□ -0.01
TNFSF9P41273 LAMTOR4-209ENST00000488241 613 ntTSL 2 BASIC14.99□□□□□ -0.01
TNFSF9P41273 NAT9-224ENST00000583757 583 ntTSL 3 BASIC14.99□□□□□ -0.01
TNFSF9P41273 AL356740.1-201ENST00000602192 1297 ntBASIC14.99□□□□□ -0.01
TNFSF9P41273 AC009133.1-201ENST00000569981 2449 ntTSL 2 BASIC14.99□□□□□ -0.01
TNFSF9P41273 PGBD2-202ENST00000355360 2879 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
TNFSF9P41273 PHTF2-204ENST00000415251 1738 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
TNFSF9P41273 TMEM78-201ENST00000323223 2175 ntAPPRIS P1 BASIC14.99□□□□□ -0.01
TNFSF9P41273 RPRD1A-202ENST00000399022 4438 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
TNFSF9P41273 C19orf66-202ENST00000397881 2140 ntAPPRIS ALT2 TSL 2 BASIC14.99□□□□□ -0.01
TNFSF9P41273 HSPA1L-201ENST00000375654 2544 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
TNFSF9P41273 CPNE5-202ENST00000393189 2542 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
TNFSF9P41273 TPM4-202ENST00000344824 1417 ntAPPRIS P1 TSL 5 BASIC14.99□□□□□ -0.01
TNFSF9P41273 RAB2A-201ENST00000262646 3848 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
TNFSF9P41273 DANT2-201ENST00000430756 2079 ntTSL 3 BASIC14.99□□□□□ -0.01
TNFSF9P41273 ABCD1P2-201ENST00000429313 1601 ntBASIC14.99□□□□□ -0.01
TNFSF9P41273 CUL7-203ENST00000535468 5504 ntAPPRIS ALT2 TSL 2 BASIC14.99□□□□□ -0.01
TNFSF9P41273 NOX5-203ENST00000448182 2498 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
TNFSF9P41273 AP3M2-202ENST00000396926 3545 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
TNFSF9P41273 AL772337.1-201ENST00000399186 2014 ntTSL 5 BASIC14.99□□□□□ -0.01
TNFSF9P41273 KRT74-203ENST00000549343 2858 ntTSL 5 BASIC14.99□□□□□ -0.01
TNFSF9P41273 SERPINB6-206ENST00000380546 1375 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
TNFSF9P41273 ADAMTS13-205ENST00000371916 4330 ntTSL 5 BASIC14.98□□□□□ -0.01
TNFSF9P41273 ZFP82-201ENST00000392161 2623 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
TNFSF9P41273 NUTM2D-202ENST00000412718 5543 ntAPPRIS ALT2 TSL 5 BASIC14.98□□□□□ -0.01
TNFSF9P41273 UGT3A2-201ENST00000282507 2355 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
TNFSF9P41273 CLOCK-211ENST00000513440 3580 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
TNFSF9P41273 SERF2-201ENST00000249786 1537 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
TNFSF9P41273 KCNH4-201ENST00000264661 3920 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
TNFSF9P41273 FGFR3-201ENST00000260795 4132 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
TNFSF9P41273 TTC28-AS1-207ENST00000428584 5859 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
TNFSF9P41273 AC002407.1-201ENST00000636668 3863 ntTSL 5 BASIC14.98□□□□□ -0.01
TNFSF9P41273 RDH12-203ENST00000551171 1879 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
TNFSF9P41273 IGF1-201ENST00000307046 1097 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
TNFSF9P41273 PPIA-201ENST00000355968 818 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
TNFSF9P41273 VPS29-201ENST00000360579 1091 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
TNFSF9P41273 HCRTR1-201ENST00000373705 1170 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
TNFSF9P41273 UPK1A-202ENST00000379013 1016 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
TNFSF9P41273 PCLAF-202ENST00000380258 911 ntTSL 2 BASIC14.98□□□□□ -0.01
TNFSF9P41273 IGF1-203ENST00000392904 761 ntTSL 5 BASIC14.98□□□□□ -0.01
TNFSF9P41273 AC097059.1-201ENST00000413103 885 ntTSL 5 BASIC14.98□□□□□ -0.01
TNFSF9P41273 AC108734.2-201ENST00000420887 1069 ntBASIC14.98□□□□□ -0.01
TNFSF9P41273 AC083949.1-201ENST00000422013 657 ntTSL 3 BASIC14.98□□□□□ -0.01
TNFSF9P41273 HNRNPA1P2-207ENST00000432375 960 ntBASIC14.98□□□□□ -0.01
TNFSF9P41273 AC006529.1-201ENST00000459978 637 ntBASIC14.98□□□□□ -0.01
TNFSF9P41273 AC091390.4-201ENST00000484974 491 ntTSL 3 BASIC14.98□□□□□ -0.01
TNFSF9P41273 PPIA-208ENST00000489459 907 ntTSL 2 BASIC14.98□□□□□ -0.01
TNFSF9P41273 BHMT-206ENST00000524080 1207 ntTSL 2 BASIC14.98□□□□□ -0.01
TNFSF9P41273 CD44-224ENST00000526669 870 ntTSL 5 BASIC14.98□□□□□ -0.01
TNFSF9P41273 AC008050.1-201ENST00000554926 632 ntTSL 3 BASIC14.98□□□□□ -0.01
TNFSF9P41273 AC051619.5-201ENST00000559003 736 ntTSL 2 BASIC14.98□□□□□ -0.01
TNFSF9P41273 AL845331.2-201ENST00000561882 1044 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
TNFSF9P41273 AC090617.4-201ENST00000572404 422 ntTSL 3 BASIC14.98□□□□□ -0.01
TNFSF9P41273 RN7SL556P-201ENST00000582856 298 ntBASIC14.98□□□□□ -0.01
TNFSF9P41273 AC003006.1-202ENST00000594684 612 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
TNFSF9P41273 MIR7845-201ENST00000618396 99 ntBASIC14.98□□□□□ -0.01
TNFSF9P41273 PPIA-210ENST00000620047 827 ntTSL 5 BASIC14.98□□□□□ -0.01
TNFSF9P41273 SNX1-214ENST00000625244 324 ntTSL 5 BASIC14.98□□□□□ -0.01
TNFSF9P41273 SETD1B-203ENST00000604567 5969 ntAPPRIS ALT2 TSL 5 BASIC14.98□□□□□ -0.01
TNFSF9P41273 PALD1-201ENST00000263563 4555 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
TNFSF9P41273 CCDC117-202ENST00000421503 3766 ntTSL 2 BASIC14.98□□□□□ -0.01
TNFSF9P41273 PLEKHO2-202ENST00000616065 3569 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
TNFSF9P41273 MUC1-225ENST00000612778 1836 ntAPPRIS ALT2 TSL 5 BASIC14.98□□□□□ -0.01
TNFSF9P41273 NIPSNAP3A-201ENST00000374767 1633 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
TNFSF9P41273 AXL-203ENST00000593513 2557 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
TNFSF9P41273 WDR46-231ENST00000374617 2358 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
TNFSF9P41273 LIMK1-208ENST00000538333 2170 ntTSL 2 BASIC14.98□□□□□ -0.01
TNFSF9P41273 CHMP5-202ENST00000419016 1957 ntTSL 2 BASIC14.98□□□□□ -0.01
TNFSF9P41273 RFESD-201ENST00000311364 2722 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
TNFSF9P41273 SUV39H2-201ENST00000313519 3087 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
TNFSF9P41273 COL11A2-203ENST00000374708 6209 ntAPPRIS P2 TSL 5 BASIC14.98□□□□□ -0.01
TNFSF9P41273 TOP3B-201ENST00000357179 2863 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
TNFSF9P41273 CDH20-202ENST00000536675 2855 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
TNFSF9P41273 SLC25A3-216ENST00000551917 1359 ntAPPRIS P4 TSL 2 BASIC14.98□□□□□ -0.01
TNFSF9P41273 UPK1A-203ENST00000616789 1366 ntTSL 5 BASIC14.98□□□□□ -0.01
TNFSF9P41273 ASGR1-209ENST00000619926 1384 ntTSL 5 BASIC14.98□□□□□ -0.01
TNFSF9P41273 AC011298.1-201ENST00000407635 3398 ntTSL 2 BASIC14.98□□□□□ -0.01
TNFSF9P41273 TGFBRAP1-201ENST00000258449 2827 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
TNFSF9P41273 ESS2-201ENST00000252137 5392 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
TNFSF9P41273 C17orf53-201ENST00000245382 2272 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
TNFSF9P41273 PLAGL1-201ENST00000354765 3663 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
TNFSF9P41273 ELOA-204ENST00000613537 4924 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
TNFSF9P41273 CPPED1-201ENST00000261660 1898 ntTSL 2 BASIC14.97□□□□□ -0.01
TNFSF9P41273 RALGAPA1-203ENST00000389698 7864 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
TNFSF9P41273 ACO1-203ENST00000541043 3618 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
TNFSF9P41273 WASHC1-201ENST00000442898 1827 ntAPPRIS P1 TSL 2 BASIC14.97□□□□□ -0.01
TNFSF9P41273 DDX39A-201ENST00000242776 1471 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
TNFSF9P41273 ZNF541-203ENST00000391901 4580 ntAPPRIS P2 TSL 5 BASIC14.97□□□□□ -0.01
TNFSF9P41273 PTPRH-202ENST00000376350 3877 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
TNFSF9P41273 ALG11-204ENST00000616513 1983 ntTSL 2 BASIC14.97□□□□□ -0.01
TNFSF9P41273 TMSB15A-201ENST00000289373 685 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
TNFSF9P41273 SPDYE4-201ENST00000328794 923 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
TNFSF9P41273 G0S2-201ENST00000367029 866 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
TNFSF9P41273 OR7E115P-201ENST00000382617 1024 ntBASIC14.97□□□□□ -0.01
TNFSF9P41273 LIF-202ENST00000403987 592 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
TNFSF9P41273 AL357563.1-201ENST00000404728 395 ntBASIC14.97□□□□□ -0.01
TNFSF9P41273 RPL17P11-201ENST00000417593 544 ntBASIC14.97□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 70.7 ms