Protein–RNA interactions for Protein: P36406

TRIM23, E3 ubiquitin-protein ligase TRIM23, humanhuman

Predictions only

Length 574 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM23P36406 MAP3K3-203ENST00000577395 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC13.67□□□□□ -0.22
TRIM23P36406 CHD1-212ENST00000614616 8095 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
TRIM23P36406 AC073869.1-201ENST00000415574 2762 ntBASIC13.67□□□□□ -0.22
TRIM23P36406 GPR37-201ENST00000303921 3021 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
TRIM23P36406 TFR2-201ENST00000223051 2888 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
TRIM23P36406 RIC1-201ENST00000251879 4127 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
TRIM23P36406 HNRNPH1-201ENST00000329433 2114 ntTSL 2 BASIC13.67□□□□□ -0.22
TRIM23P36406 CCNG1-202ENST00000393929 2366 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
TRIM23P36406 HSDL2-202ENST00000398805 3350 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
TRIM23P36406 LDB3-207ENST00000542786 1889 ntTSL 2 BASIC13.67□□□□□ -0.22
TRIM23P36406 TLL1-201ENST00000061240 6708 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
TRIM23P36406 CRLS1-201ENST00000378863 3958 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
TRIM23P36406 DUSP28-202ENST00000405954 3461 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
TRIM23P36406 ZDHHC6-201ENST00000369404 1721 ntAPPRIS ALT1 TSL 1 (best) BASIC13.67□□□□□ -0.22
TRIM23P36406 CUL1-201ENST00000325222 3064 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
TRIM23P36406 LAIR1-201ENST00000348231 1467 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
TRIM23P36406 NFIC-206ENST00000589123 8068 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
TRIM23P36406 AC087386.2-201ENST00000623212 4637 ntBASIC13.67□□□□□ -0.22
TRIM23P36406 TNIK-202ENST00000341852 4727 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
TRIM23P36406 AC092535.1-201ENST00000417557 2165 ntTSL 2 BASIC13.66□□□□□ -0.22
TRIM23P36406 CTBP2P8-201ENST00000422584 1330 ntBASIC13.66□□□□□ -0.22
TRIM23P36406 UBE2V2-205ENST00000521346 1322 ntTSL 3 BASIC13.66□□□□□ -0.22
TRIM23P36406 TPD52L2-206ENST00000358548 2275 ntTSL 2 BASIC13.66□□□□□ -0.22
TRIM23P36406 AC040160.2-201ENST00000623816 1675 ntBASIC13.66□□□□□ -0.22
TRIM23P36406 FGFR1-204ENST00000356207 3824 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
TRIM23P36406 WNT2B-202ENST00000369684 3818 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
TRIM23P36406 GRIK4-208ENST00000638419 3593 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
TRIM23P36406 MED4-201ENST00000258648 2022 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
TRIM23P36406 AJUBA-201ENST00000262713 4262 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
TRIM23P36406 MRPL55-205ENST00000366731 1423 ntTSL 2 BASIC13.66□□□□□ -0.22
TRIM23P36406 ZKSCAN4-201ENST00000377294 2375 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
TRIM23P36406 SLC26A1-201ENST00000361661 3660 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
TRIM23P36406 SFXN3-202ENST00000393459 3098 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
TRIM23P36406 NUP98-201ENST00000324932 6973 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
TRIM23P36406 OS9-220ENST00000552285 2135 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
TRIM23P36406 SYMPK-213ENST00000599460 5449 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
TRIM23P36406 TMEM212-201ENST00000334567 1881 ntAPPRIS P1 TSL 2 BASIC13.66□□□□□ -0.22
TRIM23P36406 DDN-201ENST00000421952 3749 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
TRIM23P36406 LONP1-202ENST00000540670 3002 ntTSL 2 BASIC13.66□□□□□ -0.22
TRIM23P36406 AK1-202ENST00000373156 757 ntAPPRIS P1 TSL 3 BASIC13.66□□□□□ -0.22
TRIM23P36406 AL589935.1-203ENST00000412751 465 ntTSL 3 BASIC13.66□□□□□ -0.22
TRIM23P36406 LINC00028-201ENST00000435497 587 ntTSL 2 BASIC13.66□□□□□ -0.22
TRIM23P36406 LINC00211-203ENST00000446799 662 ntTSL 3 BASIC13.66□□□□□ -0.22
TRIM23P36406 BX072579.1-201ENST00000449453 344 ntTSL 3 BASIC13.66□□□□□ -0.22
TRIM23P36406 MRAS-205ENST00000474559 856 ntAPPRIS P1 TSL 3 BASIC13.66□□□□□ -0.22
TRIM23P36406 PFN2-212ENST00000490975 858 ntTSL 4 BASIC13.66□□□□□ -0.22
TRIM23P36406 APOPT1-209ENST00000492189 513 ntTSL 3 BASIC13.66□□□□□ -0.22
TRIM23P36406 RPS23-207ENST00000511844 530 ntTSL 2 BASIC13.66□□□□□ -0.22
TRIM23P36406 EMP2-203ENST00000536829 781 ntAPPRIS P1 TSL 2 BASIC13.66□□□□□ -0.22
TRIM23P36406 FOXN3-AS2-201ENST00000554071 1262 ntBASIC13.66□□□□□ -0.22
TRIM23P36406 CRTC3-AS1-202ENST00000559531 657 ntTSL 3 BASIC13.66□□□□□ -0.22
TRIM23P36406 AC020636.2-201ENST00000569170 1189 ntAPPRIS P5 TSL 1 (best) BASIC13.66□□□□□ -0.22
TRIM23P36406 COQ4-204ENST00000608951 781 ntTSL 2 BASIC13.66□□□□□ -0.22
TRIM23P36406 DNAJC17-212ENST00000627802 428 ntTSL 4 BASIC13.66□□□□□ -0.22
TRIM23P36406 AFAP1-201ENST00000358461 7516 ntAPPRIS P3 TSL 2 BASIC13.66□□□□□ -0.22
TRIM23P36406 SNX14-203ENST00000369627 3111 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
TRIM23P36406 CLCN4-201ENST00000380829 2418 ntTSL 5 BASIC13.66□□□□□ -0.22
TRIM23P36406 KDELR2-201ENST00000258739 2884 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
TRIM23P36406 PCDHB14-201ENST00000239449 4828 ntAPPRIS P1 BASIC13.66□□□□□ -0.22
TRIM23P36406 HAP1-204ENST00000393939 5683 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
TRIM23P36406 CLEC20A-202ENST00000623247 1491 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
TRIM23P36406 EML1-203ENST00000334192 4064 ntTSL 5 BASIC13.66□□□□□ -0.22
TRIM23P36406 DENND1C-202ENST00000543576 2395 ntAPPRIS ALT2 TSL 2 BASIC13.66□□□□□ -0.22
TRIM23P36406 AC118758.2-201ENST00000614242 2813 ntBASIC13.66□□□□□ -0.22
TRIM23P36406 SOAT1-203ENST00000539888 6794 ntTSL 2 BASIC13.66□□□□□ -0.22
TRIM23P36406 AC138969.2-201ENST00000532739 9932 ntBASIC13.66□□□□□ -0.22
TRIM23P36406 AP002990.1-202ENST00000496634 5064 ntAPPRIS P1 TSL 2 BASIC13.66□□□□□ -0.22
TRIM23P36406 AC111170.3-201ENST00000624282 2464 ntBASIC13.66□□□□□ -0.22
TRIM23P36406 ATP6V0A1-203ENST00000393829 3028 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
TRIM23P36406 ATP6V0A1-206ENST00000585525 2679 ntTSL 2 BASIC13.66□□□□□ -0.22
TRIM23P36406 SENP3-202ENST00000429205 2222 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
TRIM23P36406 MORN4-201ENST00000307450 2315 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
TRIM23P36406 ARL1-202ENST00000536227 1322 ntTSL 2 BASIC13.65□□□□□ -0.22
TRIM23P36406 UHRF1BP1L-201ENST00000279907 5168 ntAPPRIS P4 TSL 1 (best) BASIC13.65□□□□□ -0.22
TRIM23P36406 Z99774.1-201ENST00000382641 2613 ntTSL 2 BASIC13.65□□□□□ -0.22
TRIM23P36406 PLCXD2-201ENST00000393934 2063 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
TRIM23P36406 AC011474.4-201ENST00000623523 2076 ntBASIC13.65□□□□□ -0.22
TRIM23P36406 CORO7-222ENST00000574025 2826 ntTSL 2 BASIC13.65□□□□□ -0.22
TRIM23P36406 KIF1C-201ENST00000320785 7919 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
TRIM23P36406 ADSL-201ENST00000216194 1620 ntTSL 2 BASIC13.65□□□□□ -0.22
TRIM23P36406 WNT3A-201ENST00000284523 2932 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
TRIM23P36406 NDRG4-217ENST00000562999 2931 ntTSL 5 BASIC13.65□□□□□ -0.22
TRIM23P36406 BMT2-201ENST00000297145 3981 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
TRIM23P36406 SEC16A-202ENST00000290037 8982 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
TRIM23P36406 ARVCF-203ENST00000406259 2871 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
TRIM23P36406 POLR2G-201ENST00000301788 827 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
TRIM23P36406 FGFR1-201ENST00000326324 3816 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
TRIM23P36406 GTF3C6-201ENST00000329970 952 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
TRIM23P36406 APOA1-203ENST00000375320 940 ntAPPRIS P1 TSL 3 BASIC13.65□□□□□ -0.22
TRIM23P36406 IL18BP-206ENST00000393707 1037 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
TRIM23P36406 SEPT7-AS1-201ENST00000412856 587 ntTSL 4 BASIC13.65□□□□□ -0.22
TRIM23P36406 AC061961.1-201ENST00000443901 432 ntTSL 3 BASIC13.65□□□□□ -0.22
TRIM23P36406 GLYCTK-204ENST00000471180 992 ntTSL 2 BASIC13.65□□□□□ -0.22
TRIM23P36406 AC022858.1-202ENST00000521084 393 ntTSL 3 BASIC13.65□□□□□ -0.22
TRIM23P36406 MBP-227ENST00000526111 581 ntTSL 4 BASIC13.65□□□□□ -0.22
TRIM23P36406 AC073573.1-201ENST00000550908 481 ntTSL 3 BASIC13.65□□□□□ -0.22
TRIM23P36406 AC074050.2-201ENST00000563338 538 ntTSL 3 BASIC13.65□□□□□ -0.22
TRIM23P36406 AL356417.2-202ENST00000608986 532 ntTSL 3 BASIC13.65□□□□□ -0.22
TRIM23P36406 NOP16-211ENST00000621444 954 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
TRIM23P36406 AC009084.3-201ENST00000623356 437 ntBASIC13.65□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 62.4 ms