Protein–RNA interactions for Protein: P35908

KRT2, Keratin, type II cytoskeletal 2 epidermal, humanhuman

Predictions only

Length 639 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT2P35908 AC112487.1-201ENST00000498032 1097 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
KRT2P35908 NOP2-211ENST00000540228 668 ntTSL 2 BASIC15.96■□□□□ 0.15
KRT2P35908 AC025154.2-201ENST00000550530 445 ntTSL 3 BASIC15.96■□□□□ 0.15
KRT2P35908 TCL1A-205ENST00000555202 717 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
KRT2P35908 AC135983.1-201ENST00000562108 1097 ntTSL 2 BASIC15.96■□□□□ 0.15
KRT2P35908 ARHGEF5-201ENST00000056217 5544 ntAPPRIS P2 TSL 1 (best) BASIC15.96■□□□□ 0.15
KRT2P35908 MIR3940-201ENST00000579148 102 ntBASIC15.96■□□□□ 0.15
KRT2P35908 NEAT1-203ENST00000601801 487 ntTSL 4 BASIC15.96■□□□□ 0.15
KRT2P35908 SNX19-211ENST00000533214 3096 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
KRT2P35908 RBM6-201ENST00000266022 3750 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
KRT2P35908 AP1B1-208ENST00000432560 4146 ntAPPRIS P1 TSL 5 BASIC15.96■□□□□ 0.15
KRT2P35908 LILRB3-201ENST00000245620 2066 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
KRT2P35908 ATG9A-201ENST00000361242 3130 ntAPPRIS P1 TSL 2 BASIC15.96■□□□□ 0.14
KRT2P35908 DAB1-207ENST00000420954 1817 ntTSL 1 (best) BASIC15.96■□□□□ 0.14
KRT2P35908 MIR497HG-202ENST00000572453 3838 ntBASIC15.96■□□□□ 0.14
KRT2P35908 RIPOR1-204ENST00000428437 4152 ntAPPRIS ALT2 TSL 2 BASIC15.96■□□□□ 0.14
KRT2P35908 LRRC41-208ENST00000617760 2158 ntTSL 5 BASIC15.96■□□□□ 0.14
KRT2P35908 USP48-213ENST00000529637 3228 ntTSL 1 (best) BASIC15.96■□□□□ 0.14
KRT2P35908 MIER1-202ENST00000355977 3595 ntTSL 5 BASIC15.96■□□□□ 0.14
KRT2P35908 SNAP29-201ENST00000215730 4287 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
KRT2P35908 FCRL1-207ENST00000491942 1554 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.14
KRT2P35908 NFATC2-207ENST00000610033 2740 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.14
KRT2P35908 PPT1-213ENST00000641319 2388 ntBASIC15.95■□□□□ 0.14
KRT2P35908 DESI2-202ENST00000302550 4208 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
KRT2P35908 CCT2-201ENST00000299300 2041 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
KRT2P35908 FXYD6-207ENST00000527717 1799 ntAPPRIS P2 TSL 2 BASIC15.95■□□□□ 0.14
KRT2P35908 FIG4-201ENST00000230124 3011 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
KRT2P35908 CDIP1-201ENST00000399599 3009 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
KRT2P35908 MEIKIN-205ENST00000616644 1438 ntAPPRIS ALT2 TSL 5 BASIC15.95■□□□□ 0.14
KRT2P35908 MLLT6-211ENST00000621332 7578 ntAPPRIS P2 TSL 1 (best) BASIC15.95■□□□□ 0.14
KRT2P35908 EPHA5-203ENST00000432638 3662 ntTSL 5 BASIC15.95■□□□□ 0.14
KRT2P35908 ZMIZ1-AS1-203ENST00000456353 2878 ntTSL 2 BASIC15.95■□□□□ 0.14
KRT2P35908 XRRA1-207ENST00000527087 2505 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
KRT2P35908 AC144450.1-201ENST00000366424 1641 ntTSL 2 BASIC15.95■□□□□ 0.14
KRT2P35908 CACNA1A-211ENST00000592864 1623 ntTSL 3 BASIC15.95■□□□□ 0.14
KRT2P35908 DLX1-203ENST00000361725 2640 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
KRT2P35908 FAM213A-204ENST00000372188 829 ntAPPRIS P1 TSL 2 BASIC15.95■□□□□ 0.14
KRT2P35908 RPL3-202ENST00000401609 1289 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
KRT2P35908 Metazoa_SRP.9-201ENST00000415635 283 ntBASIC15.95■□□□□ 0.14
KRT2P35908 Z82214.1-201ENST00000419643 988 ntTSL 3 BASIC15.95■□□□□ 0.14
KRT2P35908 HORMAD2-AS1-202ENST00000432568 727 ntTSL 3 BASIC15.95■□□□□ 0.14
KRT2P35908 NSD2-209ENST00000436793 835 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
KRT2P35908 AL356218.1-201ENST00000450864 353 ntTSL 3 BASIC15.95■□□□□ 0.14
KRT2P35908 NAA40-205ENST00000539656 577 ntTSL 4 BASIC15.95■□□□□ 0.14
KRT2P35908 IMPA2-207ENST00000588927 787 ntTSL 5 BASIC15.95■□□□□ 0.14
KRT2P35908 WDR33-201ENST00000322313 9471 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
KRT2P35908 TIGD6-201ENST00000296736 4006 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
KRT2P35908 CBFA2T3-202ENST00000327483 4033 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
KRT2P35908 RCC2P5-201ENST00000492126 1487 ntBASIC15.95■□□□□ 0.14
KRT2P35908 TONSL-201ENST00000409379 4502 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
KRT2P35908 DDX46-212ENST00000628477 1584 ntTSL 5 BASIC15.95■□□□□ 0.14
KRT2P35908 DAGLB-201ENST00000297056 2897 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
KRT2P35908 FAM200B-201ENST00000422728 2962 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
KRT2P35908 OPN4-201ENST00000241891 2308 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
KRT2P35908 CDC20B-202ENST00000322374 1679 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
KRT2P35908 DYRK1B-202ENST00000348817 2448 ntTSL 5 BASIC15.95■□□□□ 0.14
KRT2P35908 GOLGA8UP-201ENST00000527159 1755 ntBASIC15.95■□□□□ 0.14
KRT2P35908 ADGRG3-201ENST00000333493 2728 ntAPPRIS P3 TSL 1 (best) BASIC15.95■□□□□ 0.14
KRT2P35908 AP5Z1-201ENST00000348624 2901 ntAPPRIS P1 TSL 5 BASIC15.95■□□□□ 0.14
KRT2P35908 TMEM231-207ENST00000568377 2920 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
KRT2P35908 ARHGAP45-203ENST00000543365 3750 ntAPPRIS ALT2 TSL 2 BASIC15.95■□□□□ 0.14
KRT2P35908 ATG3-202ENST00000402314 3010 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
KRT2P35908 NDRG4-221ENST00000563799 3014 ntAPPRIS ALT1 TSL 2 BASIC15.94■□□□□ 0.14
KRT2P35908 MSMO1-201ENST00000261507 2269 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
KRT2P35908 RXRG-204ENST00000619224 2252 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
KRT2P35908 SUGP2-214ENST00000600377 4752 ntAPPRIS ALT2 TSL 2 BASIC15.94■□□□□ 0.14
KRT2P35908 HMGCL-203ENST00000374490 1600 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
KRT2P35908 CCDC178-201ENST00000300227 3087 ntAPPRIS P3 TSL 2 BASIC15.94■□□□□ 0.14
KRT2P35908 WDR81-205ENST00000437219 3184 ntTSL 2 BASIC15.94■□□□□ 0.14
KRT2P35908 PRSS16-203ENST00000421826 1949 ntTSL 2 BASIC15.94■□□□□ 0.14
KRT2P35908 LINC01114-202ENST00000424321 2112 ntTSL 2 BASIC15.94■□□□□ 0.14
KRT2P35908 PTENP1-202ENST00000532280 3996 ntBASIC15.94■□□□□ 0.14
KRT2P35908 ANO9-201ENST00000332826 2542 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
KRT2P35908 GRM1-201ENST00000282753 6622 ntAPPRIS P3 TSL 1 (best) BASIC15.94■□□□□ 0.14
KRT2P35908 ATP6V0A4-201ENST00000310018 3135 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
KRT2P35908 GLRX3-202ENST00000368644 3827 ntAPPRIS P1 TSL 2 BASIC15.94■□□□□ 0.14
KRT2P35908 DPCD-202ENST00000370151 858 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
KRT2P35908 PLA2G5-201ENST00000375108 1161 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
KRT2P35908 PCBP3-201ENST00000400304 1086 ntAPPRIS ALT2 TSL 1 (best) BASIC15.94■□□□□ 0.14
KRT2P35908 AL590617.2-201ENST00000432673 917 ntTSL 3 BASIC15.94■□□□□ 0.14
KRT2P35908 EEF1DP2-201ENST00000433698 843 ntBASIC15.94■□□□□ 0.14
KRT2P35908 PCBP3-208ENST00000449640 1278 ntAPPRIS ALT2 TSL 5 BASIC15.94■□□□□ 0.14
KRT2P35908 SCARNA12-201ENST00000459155 270 ntBASIC15.94■□□□□ 0.14
KRT2P35908 RAMP3-202ENST00000481345 559 ntAPPRIS P2 TSL 4 BASIC15.94■□□□□ 0.14
KRT2P35908 EIF3M-203ENST00000524896 1207 ntTSL 2 BASIC15.94■□□□□ 0.14
KRT2P35908 AC138230.1-201ENST00000525893 664 ntTSL 5 BASIC15.94■□□□□ 0.14
KRT2P35908 C12orf73-210ENST00000552940 685 ntTSL 2 BASIC15.94■□□□□ 0.14
KRT2P35908 CHMP4BP1-201ENST00000556017 588 ntBASIC15.94■□□□□ 0.14
KRT2P35908 AC011474.2-201ENST00000579268 543 ntTSL 3 BASIC15.94■□□□□ 0.14
KRT2P35908 AL049840.2-201ENST00000602722 535 ntBASIC15.94■□□□□ 0.14
KRT2P35908 ZNFX1-AS1_1.1-201ENST00000615787 198 ntBASIC15.94■□□□□ 0.14
KRT2P35908 GARS-210ENST00000627489 324 ntTSL 4 BASIC15.94■□□□□ 0.14
KRT2P35908 POLR1C-203ENST00000372389 1355 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
KRT2P35908 DLG1-AS1-202ENST00000430666 1694 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
KRT2P35908 AL355102.3-201ENST00000554299 1678 ntBASIC15.94■□□□□ 0.14
KRT2P35908 PPP2R1B-204ENST00000426998 1888 ntAPPRIS ALT2 TSL 2 BASIC15.94■□□□□ 0.14
KRT2P35908 YIPF1-201ENST00000072644 1858 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
KRT2P35908 PPIP5K1-209ENST00000420765 5718 ntAPPRIS ALT2 TSL 5 BASIC15.94■□□□□ 0.14
KRT2P35908 CAPN14-202ENST00000403897 2197 ntAPPRIS P1 TSL 2 BASIC15.94■□□□□ 0.14
KRT2P35908 PCM1-201ENST00000325083 6820 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 42.8 ms