Protein–RNA interactions for Protein: O95628

CNOT4, CCR4-NOT transcription complex subunit 4, humanhuman

Known RBP Predictions only

Length 575 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4O95628 CDK7-214ENST00000626796 358 ntTSL 5 BASIC12.5□□□□□ -0.41
CNOT4O95628 CDK7-215ENST00000629350 1149 ntTSL 5 BASIC12.5□□□□□ -0.41
CNOT4O95628 LINC00115-201ENST00000473798 1317 ntBASIC12.5□□□□□ -0.41
CNOT4O95628 WDR26-201ENST00000414423 6872 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
CNOT4O95628 SSTR3-201ENST00000610913 4100 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
CNOT4O95628 DUT-208ENST00000559540 1441 ntTSL 2 BASIC12.5□□□□□ -0.41
CNOT4O95628 OPRM1-201ENST00000229768 1465 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
CNOT4O95628 LILRA2-203ENST00000391737 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
CNOT4O95628 OPRM1-207ENST00000428397 1481 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
CNOT4O95628 SCARB2-215ENST00000639145 4471 ntAPPRIS ALT1 TSL 5 BASIC12.5□□□□□ -0.41
CNOT4O95628 AC138761.4-201ENST00000578881 1514 ntTSL 3 BASIC12.5□□□□□ -0.41
CNOT4O95628 RTFDC1-203ENST00000395881 1572 ntTSL 2 BASIC12.5□□□□□ -0.41
CNOT4O95628 C2-205ENST00000418949 1658 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
CNOT4O95628 CCDC43-203ENST00000588210 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC12.5□□□□□ -0.41
CNOT4O95628 ZNF100-201ENST00000305570 2283 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
CNOT4O95628 CMBL-201ENST00000296658 2335 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
CNOT4O95628 NDUFC2-201ENST00000281031 2518 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
CNOT4O95628 CDCA7-202ENST00000347703 2500 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
CNOT4O95628 MAGED4B-202ENST00000360134 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
CNOT4O95628 PAK3-208ENST00000446737 2550 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
CNOT4O95628 CACNA2D4-220ENST00000585732 2566 ntTSL 5 BASIC12.5□□□□□ -0.41
CNOT4O95628 Z99774.1-201ENST00000382641 2613 ntTSL 2 BASIC12.5□□□□□ -0.41
CNOT4O95628 WAC-AS1-202ENST00000528337 2608 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
CNOT4O95628 NOC2L-201ENST00000327044 2790 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
CNOT4O95628 PLK2-201ENST00000274289 2960 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
CNOT4O95628 CRCP-203ENST00000395326 3009 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
CNOT4O95628 CUL1-201ENST00000325222 3064 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
CNOT4O95628 KCNMA1-216ENST00000457953 3976 ntAPPRIS ALT2 TSL 5 BASIC12.5□□□□□ -0.41
CNOT4O95628 CSF1-201ENST00000329608 4210 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
CNOT4O95628 FRMD8-201ENST00000317568 3723 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
CNOT4O95628 CBX6-201ENST00000216083 3191 ntAPPRIS ALT2 TSL 2 BASIC12.49□□□□□ -0.41
CNOT4O95628 BNIP3-201ENST00000368636 2861 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
CNOT4O95628 LINC00475-202ENST00000416438 2506 ntTSL 2 BASIC12.49□□□□□ -0.41
CNOT4O95628 MBD4-201ENST00000249910 2470 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
CNOT4O95628 KIRREL3-202ENST00000525704 2474 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
CNOT4O95628 KBTBD4-202ENST00000430070 2372 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
CNOT4O95628 MAX-219ENST00000618858 2141 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
CNOT4O95628 C3orf52-202ENST00000431717 2054 ntAPPRIS ALT2 TSL 2 BASIC12.49□□□□□ -0.41
CNOT4O95628 AC152010.1-201ENST00000415779 2006 ntBASIC12.49□□□□□ -0.41
CNOT4O95628 ZNF460-202ENST00000537645 2037 ntTSL 2 BASIC12.49□□□□□ -0.41
CNOT4O95628 DIRAS3-201ENST00000370981 1973 ntAPPRIS P1 TSL 2 BASIC12.49□□□□□ -0.41
CNOT4O95628 PISD-209ENST00000439502 1963 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
CNOT4O95628 SIAE-206ENST00000618733 1980 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
CNOT4O95628 SIRT2-202ENST00000358931 1912 ntTSL 5 BASIC12.49□□□□□ -0.41
CNOT4O95628 COG3-206ENST00000617493 1809 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
CNOT4O95628 GAP43-201ENST00000305124 1691 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
CNOT4O95628 ACTL8-202ENST00000617065 1670 ntAPPRIS P1 TSL 2 BASIC12.49□□□□□ -0.41
CNOT4O95628 IL18BP-205ENST00000393705 1549 ntAPPRIS P2 TSL 1 (best) BASIC12.49□□□□□ -0.41
CNOT4O95628 SSTR1-201ENST00000267377 4295 ntAPPRIS P1 TSL 2 BASIC12.49□□□□□ -0.41
CNOT4O95628 VWCE-205ENST00000535710 1437 ntTSL 2 BASIC12.49□□□□□ -0.41
CNOT4O95628 NUMA1-233ENST00000616538 6998 ntAPPRIS ALT2 TSL 5 BASIC12.49□□□□□ -0.41
CNOT4O95628 TEX264-201ENST00000341333 1340 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
CNOT4O95628 PCBP1-AS1-214ENST00000419542 1309 ntTSL 5 BASIC12.49□□□□□ -0.41
CNOT4O95628 AC245100.1-201ENST00000452996 1331 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
CNOT4O95628 HS3ST5-201ENST00000312719 3901 ntAPPRIS P1 TSL 2 BASIC12.49□□□□□ -0.41
CNOT4O95628 CALR3-201ENST00000269881 1292 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
CNOT4O95628 ANK1-203ENST00000314214 1185 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
CNOT4O95628 FMR1NB-201ENST00000370467 1021 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
CNOT4O95628 RPL8P2-201ENST00000430538 502 ntBASIC12.49□□□□□ -0.41
CNOT4O95628 AC078991.1-201ENST00000437297 610 ntBASIC12.49□□□□□ -0.41
CNOT4O95628 RPS27L-203ENST00000439025 970 ntTSL 2 BASIC12.49□□□□□ -0.41
CNOT4O95628 DCST1-AS1-201ENST00000452962 822 ntTSL 2 BASIC12.49□□□□□ -0.41
CNOT4O95628 CHCHD2P9-201ENST00000461726 456 ntBASIC12.49□□□□□ -0.41
CNOT4O95628 RN7SL81P-201ENST00000493781 261 ntBASIC12.49□□□□□ -0.41
CNOT4O95628 TVP23C-205ENST00000518321 1080 ntAPPRIS P2 TSL 1 (best) BASIC12.49□□□□□ -0.41
CNOT4O95628 CFL1-206ENST00000527344 962 ntTSL 2 BASIC12.49□□□□□ -0.41
CNOT4O95628 SERGEF-208ENST00000528200 1264 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
CNOT4O95628 AL031713.1-201ENST00000564813 661 ntBASIC12.49□□□□□ -0.41
CNOT4O95628 AC005726.2-204ENST00000577790 511 ntAPPRIS ALT2 TSL 4 BASIC12.49□□□□□ -0.41
CNOT4O95628 RPL18A-204ENST00000599898 491 ntTSL 2 BASIC12.49□□□□□ -0.41
CNOT4O95628 AC087045.2-201ENST00000606279 1003 ntBASIC12.49□□□□□ -0.41
CNOT4O95628 AC092171.5-201ENST00000608012 942 ntBASIC12.49□□□□□ -0.41
CNOT4O95628 PCDH8-201ENST00000338862 3708 ntAPPRIS ALT1 TSL 1 (best) BASIC12.49□□□□□ -0.41
CNOT4O95628 ARHGEF10-207ENST00000520359 5472 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
CNOT4O95628 LINC00863-201ENST00000439559 3287 ntTSL 5 BASIC12.49□□□□□ -0.41
CNOT4O95628 SEMA3F-202ENST00000413852 3212 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
CNOT4O95628 NARFL-202ENST00000540986 3212 ntTSL 2 BASIC12.49□□□□□ -0.41
CNOT4O95628 PAX2-202ENST00000361791 3193 ntAPPRIS ALT1 TSL 2 BASIC12.49□□□□□ -0.41
CNOT4O95628 RPS6KA4-202ENST00000528057 3121 ntAPPRIS ALT1 TSL 1 (best) BASIC12.49□□□□□ -0.41
CNOT4O95628 CSPG4P11-201ENST00000560634 4910 ntBASIC12.49□□□□□ -0.41
CNOT4O95628 OR2I1P-208ENST00000641137 4948 ntBASIC12.49□□□□□ -0.41
CNOT4O95628 KDELR2-201ENST00000258739 2884 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
CNOT4O95628 C1QTNF1-204ENST00000392445 2833 ntAPPRIS P1 TSL 2 BASIC12.49□□□□□ -0.41
CNOT4O95628 CHRNB4-201ENST00000261751 2623 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
CNOT4O95628 ZNF655-201ENST00000252713 2535 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
CNOT4O95628 WDR27-201ENST00000423258 2465 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
CNOT4O95628 IL17RD-208ENST00000640796 2345 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
CNOT4O95628 ZNF772-204ENST00000427512 5130 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
CNOT4O95628 MRPS10-201ENST00000053468 2110 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
CNOT4O95628 CDC42SE2-202ENST00000395246 3485 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
CNOT4O95628 TIAM1-201ENST00000286827 7200 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
CNOT4O95628 LINC00865-202ENST00000448963 4272 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
CNOT4O95628 SNAP91-215ENST00000521743 4263 ntAPPRIS P2 TSL 5 BASIC12.48□□□□□ -0.41
CNOT4O95628 MARVELD3-201ENST00000268485 2912 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
CNOT4O95628 NDRG4-217ENST00000562999 2931 ntTSL 5 BASIC12.48□□□□□ -0.41
CNOT4O95628 FBXL4-201ENST00000229971 2810 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
CNOT4O95628 TXLNA-201ENST00000373609 5012 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
CNOT4O95628 FBN3-207ENST00000601739 9086 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
CNOT4O95628 PLA2G16-201ENST00000323646 2594 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
CNOT4O95628 TNFRSF11A-201ENST00000269485 3591 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Retrieved 100 of 98,524 protein–RNA pairs in 52.4 ms