Protein–RNA interactions for Protein: O95096

NKX2-2, Homeobox protein Nkx-2.2, humanhuman

Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-2O95096 PCDH17-201ENST00000377918 8232 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
NKX2-2O95096 PPP1R26P4-201ENST00000619065 3527 ntBASIC12.82□□□□□ -0.36
NKX2-2O95096 PTPN13-203ENST00000427191 8487 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
NKX2-2O95096 TRMT10B-207ENST00000537911 2108 ntTSL 2 BASIC12.82□□□□□ -0.36
NKX2-2O95096 FIG4-201ENST00000230124 3011 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
NKX2-2O95096 PPM1L-201ENST00000295839 1449 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
NKX2-2O95096 PPP1R8-202ENST00000311772 2344 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
NKX2-2O95096 SPAG8-209ENST00000484764 1618 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
NKX2-2O95096 ZNF641-201ENST00000301042 4544 ntTSL 5 BASIC12.82□□□□□ -0.36
NKX2-2O95096 ADGRG3-201ENST00000333493 2728 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
NKX2-2O95096 SH3BGRL3-202ENST00000319041 768 ntTSL 2 BASIC12.82□□□□□ -0.36
NKX2-2O95096 LEMD1-205ENST00000367154 786 ntTSL 2 BASIC12.82□□□□□ -0.36
NKX2-2O95096 DPCD-202ENST00000370151 858 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
NKX2-2O95096 UPK1A-202ENST00000379013 1016 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
NKX2-2O95096 RANGRF-202ENST00000407006 1074 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
NKX2-2O95096 ZNF226-203ENST00000413984 716 ntTSL 3 BASIC12.82□□□□□ -0.36
NKX2-2O95096 AL592076.1-201ENST00000424448 303 ntBASIC12.82□□□□□ -0.36
NKX2-2O95096 GRPEL2P1-201ENST00000453145 339 ntBASIC12.82□□□□□ -0.36
NKX2-2O95096 CEP164P1-201ENST00000455142 418 ntBASIC12.82□□□□□ -0.36
NKX2-2O95096 PGAP2-212ENST00000464906 1259 ntTSL 2 BASIC12.82□□□□□ -0.36
NKX2-2O95096 NDUFS6P1-201ENST00000485187 316 ntBASIC12.82□□□□□ -0.36
NKX2-2O95096 PCOLCE2-208ENST00000485766 1088 ntTSL 5 BASIC12.82□□□□□ -0.36
NKX2-2O95096 CDKN2AIP-205ENST00000510928 860 ntTSL 2 BASIC12.82□□□□□ -0.36
NKX2-2O95096 NAV2-AS2-201ENST00000533767 782 ntTSL 2 BASIC12.82□□□□□ -0.36
NKX2-2O95096 CHMP4BP1-201ENST00000556017 588 ntBASIC12.82□□□□□ -0.36
NKX2-2O95096 AC087741.1-205ENST00000572730 750 ntTSL 3 BASIC12.82□□□□□ -0.36
NKX2-2O95096 IMPA2-207ENST00000588927 787 ntTSL 5 BASIC12.82□□□□□ -0.36
NKX2-2O95096 SNRNP27-201ENST00000244227 1802 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
NKX2-2O95096 EFEMP1-201ENST00000355426 1820 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
NKX2-2O95096 CAMKK2-209ENST00000446440 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
NKX2-2O95096 GPM6B-202ENST00000355135 1673 ntAPPRIS ALT1 TSL 1 (best) BASIC12.82□□□□□ -0.36
NKX2-2O95096 SVOPL-203ENST00000421622 1653 ntTSL 5 BASIC12.82□□□□□ -0.36
NKX2-2O95096 SETMAR-205ENST00000425863 1657 ntTSL 2 BASIC12.82□□□□□ -0.36
NKX2-2O95096 ATP12A-201ENST00000218548 3732 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
NKX2-2O95096 GCM2-201ENST00000379491 2441 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
NKX2-2O95096 PAM-201ENST00000304400 3156 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
NKX2-2O95096 AC019109.1-201ENST00000401725 1874 ntBASIC12.82□□□□□ -0.36
NKX2-2O95096 AMOTL2-212ENST00000514516 4521 ntTSL 2 BASIC12.82□□□□□ -0.36
NKX2-2O95096 DANT2-201ENST00000430756 2079 ntTSL 3 BASIC12.82□□□□□ -0.36
NKX2-2O95096 AC104667.2-202ENST00000452801 1301 ntTSL 2 BASIC12.82□□□□□ -0.36
NKX2-2O95096 ATN1-201ENST00000356654 4351 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
NKX2-2O95096 FAM153C-201ENST00000398106 1510 ntAPPRIS ALT2 TSL 2 BASIC12.82□□□□□ -0.36
NKX2-2O95096 IMMT-212ENST00000620815 1520 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
NKX2-2O95096 ABCG8-201ENST00000272286 2665 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
NKX2-2O95096 SHPK-201ENST00000225519 3838 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
NKX2-2O95096 SLC39A14-201ENST00000240095 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
NKX2-2O95096 DAGLB-201ENST00000297056 2897 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
NKX2-2O95096 COL6A1-207ENST00000612273 3251 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
NKX2-2O95096 ARAF-201ENST00000290277 2504 ntAPPRIS ALT1 TSL 1 (best) BASIC12.82□□□□□ -0.36
NKX2-2O95096 STEAP2-202ENST00000394621 7033 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
NKX2-2O95096 MAP7-204ENST00000454590 3119 ntAPPRIS ALT2 TSL 2 BASIC12.82□□□□□ -0.36
NKX2-2O95096 AC015802.6-201ENST00000640006 5654 ntAPPRIS P1 TSL 2 BASIC12.82□□□□□ -0.36
NKX2-2O95096 ARMC5-205ENST00000563544 3549 ntAPPRIS ALT2 TSL 2 BASIC12.82□□□□□ -0.36
NKX2-2O95096 LRRFIP1-202ENST00000289175 3709 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
NKX2-2O95096 MCRIP1-207ENST00000574190 2775 ntAPPRIS P1 TSL 2 BASIC12.81□□□□□ -0.36
NKX2-2O95096 LSM14A-203ENST00000544216 3596 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
NKX2-2O95096 PML-202ENST00000268059 3029 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
NKX2-2O95096 DLX1-203ENST00000361725 2640 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
NKX2-2O95096 ARAP3-201ENST00000239440 5250 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
NKX2-2O95096 ODCP-201ENST00000459650 1639 ntBASIC12.81□□□□□ -0.36
NKX2-2O95096 FBXO3-203ENST00000526785 5798 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
NKX2-2O95096 APCDD1L-AS1-203ENST00000427140 2092 ntTSL 2 BASIC12.81□□□□□ -0.36
NKX2-2O95096 CPEB1-213ENST00000617462 2068 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
NKX2-2O95096 RTN3-210ENST00000540798 3124 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
NKX2-2O95096 ADAM17-204ENST00000618923 1881 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
NKX2-2O95096 DCAF8-201ENST00000326837 3972 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
NKX2-2O95096 SEMA4B-201ENST00000332496 3781 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
NKX2-2O95096 ATCAY-201ENST00000450849 5070 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
NKX2-2O95096 LAIR2-201ENST00000301202 699 ntAPPRIS P4 TSL 1 (best) BASIC12.81□□□□□ -0.36
NKX2-2O95096 PYY2-201ENST00000315776 282 ntBASIC12.81□□□□□ -0.36
NKX2-2O95096 FAM86C1-202ENST00000359244 2110 ntAPPRIS ALT2 TSL 2 BASIC12.81□□□□□ -0.36
NKX2-2O95096 SNHG17-201ENST00000413755 648 ntTSL 3 BASIC12.81□□□□□ -0.36
NKX2-2O95096 AL137058.1-201ENST00000418237 673 ntTSL 5 BASIC12.81□□□□□ -0.36
NKX2-2O95096 AC131097.3-203ENST00000420272 1193 ntTSL 5 BASIC12.81□□□□□ -0.36
NKX2-2O95096 LINC00841-201ENST00000451929 2126 ntTSL 2 BASIC12.81□□□□□ -0.36
NKX2-2O95096 RN7SL720P-201ENST00000488178 304 ntBASIC12.81□□□□□ -0.36
NKX2-2O95096 EIF3M-203ENST00000524896 1207 ntTSL 2 BASIC12.81□□□□□ -0.36
NKX2-2O95096 AC025154.2-202ENST00000552379 592 ntTSL 3 BASIC12.81□□□□□ -0.36
NKX2-2O95096 C12orf73-210ENST00000552940 685 ntTSL 2 BASIC12.81□□□□□ -0.36
NKX2-2O95096 C14orf132-201ENST00000553764 562 ntTSL 4 BASIC12.81□□□□□ -0.36
NKX2-2O95096 LINC01500-204ENST00000556815 752 ntTSL 3 BASIC12.81□□□□□ -0.36
NKX2-2O95096 FGFR3P5-201ENST00000564496 886 ntBASIC12.81□□□□□ -0.36
NKX2-2O95096 AP005264.5-201ENST00000590066 467 ntBASIC12.81□□□□□ -0.36
NKX2-2O95096 AC091769.1-201ENST00000619576 568 ntBASIC12.81□□□□□ -0.36
NKX2-2O95096 KRT33A-201ENST00000007735 1287 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
NKX2-2O95096 CDCA3-202ENST00000422785 2760 ntTSL 2 BASIC12.81□□□□□ -0.36
NKX2-2O95096 CNTD1-204ENST00000588408 2369 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
NKX2-2O95096 VWA8-201ENST00000281496 3475 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
NKX2-2O95096 FBXO34-201ENST00000313833 3464 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
NKX2-2O95096 SLC35C2-213ENST00000543605 5740 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
NKX2-2O95096 AC087386.2-201ENST00000623212 4637 ntBASIC12.81□□□□□ -0.36
NKX2-2O95096 AC004241.5-201ENST00000623870 2448 ntBASIC12.81□□□□□ -0.36
NKX2-2O95096 PBRM1-204ENST00000394830 5071 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
NKX2-2O95096 RAMP3-201ENST00000242249 1323 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
NKX2-2O95096 CAND2-201ENST00000295989 4429 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
NKX2-2O95096 AC008040.5-201ENST00000599781 1781 ntBASIC12.81□□□□□ -0.36
NKX2-2O95096 NWD2-201ENST00000309447 8325 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
NKX2-2O95096 GLRX3-202ENST00000368644 3827 ntAPPRIS P1 TSL 2 BASIC12.81□□□□□ -0.36
NKX2-2O95096 MEX3B-202ENST00000558133 4333 ntBASIC12.81□□□□□ -0.36
NKX2-2O95096 USP3-204ENST00000540797 5474 ntTSL 2 BASIC12.81□□□□□ -0.36
Retrieved 100 of 98,524 protein–RNA pairs in 39.2 ms