Protein–RNA interactions for Protein: O43889

CREB3, Cyclic AMP-responsive element-binding protein 3, humanhuman

Predictions only

Length 395 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CREB3O43889 AC069277.1-202ENST00000414438 761 ntTSL 3 BASIC14.63□□□□□ -0.07
CREB3O43889 AC084346.1-201ENST00000520962 528 ntTSL 4 BASIC14.63□□□□□ -0.07
CREB3O43889 TMEM91-211ENST00000544232 725 ntTSL 3 BASIC14.63□□□□□ -0.07
CREB3O43889 AC103810.3-201ENST00000583567 96 ntBASIC14.63□□□□□ -0.07
CREB3O43889 IRF3-215ENST00000596822 823 ntTSL 3 BASIC14.63□□□□□ -0.07
CREB3O43889 NDUFB5-216ENST00000611971 951 ntTSL 2 BASIC14.63□□□□□ -0.07
CREB3O43889 LINC00923-205ENST00000615399 932 ntTSL 5 BASIC14.63□□□□□ -0.07
CREB3O43889 TP53-221ENST00000615910 1149 ntTSL 5 BASIC14.63□□□□□ -0.07
CREB3O43889 LINC01669-205ENST00000624561 713 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
CREB3O43889 GDAP1L1-208ENST00000617075 2645 ntTSL 5 BASIC14.63□□□□□ -0.07
CREB3O43889 AC105206.1-202ENST00000314927 2368 ntBASIC14.63□□□□□ -0.07
CREB3O43889 DUT-208ENST00000559540 1441 ntTSL 2 BASIC14.63□□□□□ -0.07
CREB3O43889 FLJ40288-201ENST00000332558 1998 ntTSL 2 BASIC14.63□□□□□ -0.07
CREB3O43889 LINC00680-205ENST00000450081 1593 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
CREB3O43889 ADD2-202ENST00000355733 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
CREB3O43889 MAP3K21-202ENST00000366623 3910 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
CREB3O43889 ASAP1-201ENST00000357668 6344 ntAPPRIS ALT2 TSL 5 BASIC14.63□□□□□ -0.07
CREB3O43889 CES3-201ENST00000303334 3834 ntAPPRIS P3 TSL 1 (best) BASIC14.63□□□□□ -0.07
CREB3O43889 METTL13-203ENST00000367737 2865 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
CREB3O43889 CNTN1-203ENST00000547702 3033 ntTSL 2 BASIC14.63□□□□□ -0.07
CREB3O43889 PTPRH-202ENST00000376350 3877 ntAPPRIS P3 TSL 1 (best) BASIC14.63□□□□□ -0.07
CREB3O43889 ARFIP1-203ENST00000405727 1601 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
CREB3O43889 TMEM144-209ENST00000509278 1633 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
CREB3O43889 SMTNL1-202ENST00000527972 1649 ntAPPRIS P2 TSL 5 BASIC14.63□□□□□ -0.07
CREB3O43889 CETP-201ENST00000200676 1791 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
CREB3O43889 CD48-201ENST00000368045 1793 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
CREB3O43889 ZHX2-201ENST00000314393 4624 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
CREB3O43889 ZNF536-201ENST00000355537 4945 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
CREB3O43889 COX6B2-210ENST00000593184 2083 ntAPPRIS P1 TSL 2 BASIC14.62□□□□□ -0.07
CREB3O43889 AC011298.1-201ENST00000407635 3398 ntTSL 2 BASIC14.62□□□□□ -0.07
CREB3O43889 ZNF815P-201ENST00000421890 1352 ntTSL 2 BASIC14.62□□□□□ -0.07
CREB3O43889 BRMS1-202ENST00000425825 1363 ntTSL 5 BASIC14.62□□□□□ -0.07
CREB3O43889 C11orf21-201ENST00000381153 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
CREB3O43889 PGAP2-227ENST00000496834 1530 ntTSL 2 BASIC14.62□□□□□ -0.07
CREB3O43889 SPERT-204ENST00000610924 1505 ntAPPRIS ALT2 TSL 5 BASIC14.62□□□□□ -0.07
CREB3O43889 XRCC6-202ENST00000360079 2296 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
CREB3O43889 ZMYND15-206ENST00000592813 2274 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
CREB3O43889 HMGCS2-201ENST00000369406 2428 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
CREB3O43889 PIGV-202ENST00000374145 2713 ntAPPRIS P1 TSL 2 BASIC14.62□□□□□ -0.07
CREB3O43889 ZCCHC8-207ENST00000543897 5663 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
CREB3O43889 MCHR1-201ENST00000249016 2851 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
CREB3O43889 MAN2B1-203ENST00000456935 3184 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
CREB3O43889 PRRT3-203ENST00000412055 3761 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
CREB3O43889 TNN-202ENST00000621086 4234 ntTSL 5 BASIC14.62□□□□□ -0.07
CREB3O43889 AMHR2-201ENST00000257863 1863 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
CREB3O43889 CRB3-201ENST00000308243 631 ntAPPRIS ALT2 TSL 2 BASIC14.62□□□□□ -0.07
CREB3O43889 ZNF335-201ENST00000322927 4430 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
CREB3O43889 SF1-202ENST00000334944 3094 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
CREB3O43889 CTSL-201ENST00000340342 1436 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
CREB3O43889 RGS10-202ENST00000369103 804 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
CREB3O43889 UBL4A-201ENST00000369653 711 ntTSL 3 BASIC14.62□□□□□ -0.07
CREB3O43889 HDDC2-202ENST00000398153 918 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
CREB3O43889 LINC00887-204ENST00000456816 796 ntTSL 3 BASIC14.62□□□□□ -0.07
CREB3O43889 AC005740.1-201ENST00000515639 522 ntBASIC14.62□□□□□ -0.07
CREB3O43889 AC024681.1-201ENST00000521917 487 ntBASIC14.62□□□□□ -0.07
CREB3O43889 AP001547.1-201ENST00000527440 374 ntTSL 3 BASIC14.62□□□□□ -0.07
CREB3O43889 NDUFC2-204ENST00000528164 561 ntTSL 2 BASIC14.62□□□□□ -0.07
CREB3O43889 AP003419.2-201ENST00000543494 711 ntAPPRIS P1 TSL 3 BASIC14.62□□□□□ -0.07
CREB3O43889 CYB5D1-203ENST00000571846 1870 ntTSL 5 BASIC14.62□□□□□ -0.07
CREB3O43889 ELP5-212ENST00000574255 671 ntTSL 2 BASIC14.62□□□□□ -0.07
CREB3O43889 AC005498.2-204ENST00000590613 413 ntTSL 3 BASIC14.62□□□□□ -0.07
CREB3O43889 AL109837.1-201ENST00000603272 613 ntBASIC14.62□□□□□ -0.07
CREB3O43889 AC022001.2-201ENST00000607849 580 ntTSL 2 BASIC14.62□□□□□ -0.07
CREB3O43889 LINC01783-202ENST00000614408 828 ntBASIC14.62□□□□□ -0.07
CREB3O43889 AP001505.2-201ENST00000616815 443 ntBASIC14.62□□□□□ -0.07
CREB3O43889 BX284668.2-205ENST00000619677 828 ntBASIC14.62□□□□□ -0.07
CREB3O43889 MBD3L2B-201ENST00000636986 860 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
CREB3O43889 MIR9-3HG-201ENST00000536780 4778 ntTSL 3 BASIC14.62□□□□□ -0.07
CREB3O43889 ACOX1-201ENST00000293217 7514 ntAPPRIS P5 TSL 1 (best) BASIC14.62□□□□□ -0.07
CREB3O43889 CDH16-204ENST00000565796 2694 ntTSL 2 BASIC14.62□□□□□ -0.07
CREB3O43889 SMAGP-203ENST00000603798 2350 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
CREB3O43889 SENP3-202ENST00000429205 2222 ntAPPRIS P1 TSL 5 BASIC14.62□□□□□ -0.07
CREB3O43889 GNG12-AS1-201ENST00000413628 2058 ntTSL 2 BASIC14.62□□□□□ -0.07
CREB3O43889 CASP8-202ENST00000264275 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
CREB3O43889 ACO1-203ENST00000541043 3618 ntAPPRIS P1 TSL 5 BASIC14.62□□□□□ -0.07
CREB3O43889 NHLH2-202ENST00000369506 7226 ntAPPRIS P1 BASIC14.62□□□□□ -0.07
CREB3O43889 TIPARP-201ENST00000295924 4109 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
CREB3O43889 TBKBP1-201ENST00000361722 4121 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
CREB3O43889 GRIN1-202ENST00000371546 4114 ntTSL 5 BASIC14.62□□□□□ -0.07
CREB3O43889 PAX5-214ENST00000523241 1342 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
CREB3O43889 ANKS1B-208ENST00000547010 2595 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
CREB3O43889 ARAP1-201ENST00000334211 4942 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
CREB3O43889 ZNF541-202ENST00000314121 4631 ntAPPRIS ALT2 TSL 5 BASIC14.62□□□□□ -0.07
CREB3O43889 CDK5RAP1-202ENST00000346416 2122 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
CREB3O43889 CD22-209ENST00000594250 2107 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
CREB3O43889 CAMKV-201ENST00000296471 2913 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
CREB3O43889 LIMD1-202ENST00000440097 2773 ntTSL 5 BASIC14.62□□□□□ -0.07
CREB3O43889 SDC1-202ENST00000381150 3291 ntAPPRIS P1 TSL 5 BASIC14.61□□□□□ -0.07
CREB3O43889 RALGAPA1-201ENST00000307138 7911 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
CREB3O43889 RNH1-224ENST00000534797 2973 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
CREB3O43889 L2HGDH-201ENST00000261699 1377 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
CREB3O43889 DIS3L2-205ENST00000409401 2048 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
CREB3O43889 DDC-207ENST00000444124 2041 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
CREB3O43889 PRKAR2A-202ENST00000296446 3318 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
CREB3O43889 CIPC-201ENST00000361786 4486 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
CREB3O43889 LDB3-207ENST00000542786 1889 ntTSL 2 BASIC14.61□□□□□ -0.07
CREB3O43889 ADAM17-204ENST00000618923 1881 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
CREB3O43889 DCUN1D4-201ENST00000334635 4312 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
CREB3O43889 KCNJ9-201ENST00000368088 4170 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
CREB3O43889 DGCR8-201ENST00000351989 4514 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 68.7 ms