Protein–RNA interactions for Protein: F8WFD2

NPIPA3, Nuclear pore complex-interacting protein family member A3, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA3F8WFD2 FGF12-207ENST00000454309 3058 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
NPIPA3F8WFD2 AGFG1-204ENST00000409315 2912 ntTSL 5 BASIC12.75□□□□□ -0.37
NPIPA3F8WFD2 COL9A2-202ENST00000372748 2862 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
NPIPA3F8WFD2 SRGAP3-201ENST00000360413 8415 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
NPIPA3F8WFD2 MSH5-201ENST00000375703 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
NPIPA3F8WFD2 TFDP1-201ENST00000375370 2648 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
NPIPA3F8WFD2 PPP1R15B-201ENST00000367188 5227 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
NPIPA3F8WFD2 HS1BP3-201ENST00000304031 2370 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
NPIPA3F8WFD2 PEX5L-211ENST00000472994 2235 ntAPPRIS ALT2 TSL 2 BASIC12.74□□□□□ -0.37
NPIPA3F8WFD2 TRMT10B-207ENST00000537911 2108 ntTSL 2 BASIC12.74□□□□□ -0.37
NPIPA3F8WFD2 CEP135-202ENST00000422247 2092 ntTSL 2 BASIC12.74□□□□□ -0.37
NPIPA3F8WFD2 RPS6KC1-206ENST00000543354 4082 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
NPIPA3F8WFD2 MYO16-205ENST00000457511 7436 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
NPIPA3F8WFD2 CLEC16A-202ENST00000409552 3365 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
NPIPA3F8WFD2 ASB15-207ENST00000540573 1651 ntTSL 2 BASIC12.74□□□□□ -0.37
NPIPA3F8WFD2 TYK2-210ENST00000529370 3176 ntTSL 2 BASIC12.74□□□□□ -0.37
NPIPA3F8WFD2 GPD1-205ENST00000548814 1591 ntTSL 2 BASIC12.74□□□□□ -0.37
NPIPA3F8WFD2 ADPRH-205ENST00000478927 1501 ntAPPRIS P1 TSL 2 BASIC12.74□□□□□ -0.37
NPIPA3F8WFD2 ABCG1-201ENST00000343687 3037 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
NPIPA3F8WFD2 BTNL8-211ENST00000610640 1488 ntTSL 5 BASIC12.74□□□□□ -0.37
NPIPA3F8WFD2 WNT3A-201ENST00000284523 2932 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
NPIPA3F8WFD2 PPP1R1B-202ENST00000394265 1419 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
NPIPA3F8WFD2 PLSCR1-214ENST00000487389 1443 ntAPPRIS ALT2 TSL 5 BASIC12.74□□□□□ -0.37
NPIPA3F8WFD2 KRBOX4-202ENST00000344302 2774 ntAPPRIS ALT2 TSL 2 BASIC12.74□□□□□ -0.37
NPIPA3F8WFD2 MED12L-203ENST00000422248 2757 ntAPPRIS ALT2 TSL 2 BASIC12.74□□□□□ -0.37
NPIPA3F8WFD2 AC090502.4-201ENST00000551714 1386 ntBASIC12.74□□□□□ -0.37
NPIPA3F8WFD2 GRM1-204ENST00000492807 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
NPIPA3F8WFD2 RELL1-201ENST00000314117 1326 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
NPIPA3F8WFD2 PTENP1-202ENST00000532280 3996 ntBASIC12.74□□□□□ -0.37
NPIPA3F8WFD2 CST5-201ENST00000304710 756 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
NPIPA3F8WFD2 ANK1-203ENST00000314214 1185 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
NPIPA3F8WFD2 CMTM5-201ENST00000339180 1173 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
NPIPA3F8WFD2 Metazoa_SRP.4-201ENST00000366232 298 ntBASIC12.74□□□□□ -0.37
NPIPA3F8WFD2 SKA1-202ENST00000398452 979 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
NPIPA3F8WFD2 Metazoa_SRP.9-201ENST00000415635 283 ntBASIC12.74□□□□□ -0.37
NPIPA3F8WFD2 AL137058.1-201ENST00000418237 673 ntTSL 5 BASIC12.74□□□□□ -0.37
NPIPA3F8WFD2 PSMA1-202ENST00000418988 1266 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
NPIPA3F8WFD2 AC018638.5-201ENST00000450885 754 ntBASIC12.74□□□□□ -0.37
NPIPA3F8WFD2 PIN4P1-201ENST00000451079 396 ntBASIC12.74□□□□□ -0.37
NPIPA3F8WFD2 AC233724.6-201ENST00000503184 1088 ntAPPRIS P1 BASIC12.74□□□□□ -0.37
NPIPA3F8WFD2 SNCB-203ENST00000506696 552 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
NPIPA3F8WFD2 CTBP2P4-201ENST00000513884 920 ntBASIC12.74□□□□□ -0.37
NPIPA3F8WFD2 AC005740.1-201ENST00000515639 522 ntBASIC12.74□□□□□ -0.37
NPIPA3F8WFD2 IGHV3-37-201ENST00000518544 340 ntBASIC12.74□□□□□ -0.37
NPIPA3F8WFD2 EIF3K-202ENST00000538434 966 ntTSL 2 BASIC12.74□□□□□ -0.37
NPIPA3F8WFD2 DBP-202ENST00000593500 712 ntTSL 2 BASIC12.74□□□□□ -0.37
NPIPA3F8WFD2 UBA52-208ENST00000596304 554 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
NPIPA3F8WFD2 EAF1-AS1-208ENST00000608408 770 ntTSL 5 BASIC12.74□□□□□ -0.37
NPIPA3F8WFD2 HIST1H2BE-201ENST00000614097 497 ntAPPRIS P1 BASIC12.74□□□□□ -0.37
NPIPA3F8WFD2 RPS10-207ENST00000621356 784 ntAPPRIS P1 TSL 2 BASIC12.74□□□□□ -0.37
NPIPA3F8WFD2 ENDOV-206ENST00000518901 2549 ntTSL 2 BASIC12.74□□□□□ -0.37
NPIPA3F8WFD2 NADSYN1-216ENST00000530055 2416 ntTSL 2 BASIC12.74□□□□□ -0.37
NPIPA3F8WFD2 C15orf39-202ENST00000394987 4430 ntAPPRIS P2 TSL 1 (best) BASIC12.74□□□□□ -0.37
NPIPA3F8WFD2 ETV4-202ENST00000393664 2182 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
NPIPA3F8WFD2 SLC34A2-203ENST00000504570 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
NPIPA3F8WFD2 ARHGAP4-201ENST00000350060 3235 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
NPIPA3F8WFD2 PGLYRP4-202ENST00000368739 2116 ntAPPRIS ALT1 TSL 5 BASIC12.74□□□□□ -0.37
NPIPA3F8WFD2 SLC6A12-207ENST00000536824 2101 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
NPIPA3F8WFD2 KCNJ9-201ENST00000368088 4170 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
NPIPA3F8WFD2 EPHX2-207ENST00000521400 3140 ntAPPRIS P2 TSL 1 (best) BASIC12.74□□□□□ -0.37
NPIPA3F8WFD2 PLCXD2-201ENST00000393934 2063 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
NPIPA3F8WFD2 LINC00479-201ENST00000412102 2033 ntTSL 2 BASIC12.74□□□□□ -0.37
NPIPA3F8WFD2 MYNN-201ENST00000349841 4999 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
NPIPA3F8WFD2 GPT2-201ENST00000340124 3984 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
NPIPA3F8WFD2 RGPD6-202ENST00000330331 2848 ntTSL 2 BASIC12.74□□□□□ -0.37
NPIPA3F8WFD2 RGPD8-202ENST00000330575 2848 ntTSL 2 BASIC12.74□□□□□ -0.37
NPIPA3F8WFD2 ADAT1-201ENST00000307921 1869 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
NPIPA3F8WFD2 ATXN2L-204ENST00000382686 3739 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
NPIPA3F8WFD2 CLASRP-204ENST00000544944 2769 ntAPPRIS ALT2 TSL 2 BASIC12.74□□□□□ -0.37
NPIPA3F8WFD2 PLXNC1-202ENST00000545312 1813 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
NPIPA3F8WFD2 TMUB2-211ENST00000589184 1837 ntTSL 5 BASIC12.74□□□□□ -0.37
NPIPA3F8WFD2 CAMK2D-204ENST00000394522 2696 ntAPPRIS ALT1 TSL 1 (best) BASIC12.74□□□□□ -0.37
NPIPA3F8WFD2 CCHCR1-201ENST00000376266 2625 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
NPIPA3F8WFD2 ADAMTSL4-203ENST00000369039 4319 ntAPPRIS ALT2 TSL 5 BASIC12.74□□□□□ -0.37
NPIPA3F8WFD2 ARFGAP1-203ENST00000370283 3281 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
NPIPA3F8WFD2 ZKSCAN4-201ENST00000377294 2375 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
NPIPA3F8WFD2 NEFH-201ENST00000310624 3783 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
NPIPA3F8WFD2 CCDC117-202ENST00000421503 3766 ntTSL 2 BASIC12.73□□□□□ -0.37
NPIPA3F8WFD2 XKRX-202ENST00000468904 2249 ntTSL 2 BASIC12.73□□□□□ -0.37
NPIPA3F8WFD2 ZDHHC4-204ENST00000396709 1485 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
NPIPA3F8WFD2 MLXIP-208ENST00000538698 5097 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
NPIPA3F8WFD2 DNMT3B-202ENST00000328111 4336 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
NPIPA3F8WFD2 DRC3-203ENST00000399187 2008 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
NPIPA3F8WFD2 HTR3E-203ENST00000425359 1326 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
NPIPA3F8WFD2 FCRL6-201ENST00000321935 1997 ntAPPRIS ALT2 TSL 2 BASIC12.73□□□□□ -0.37
NPIPA3F8WFD2 SLC44A1-202ENST00000374723 9640 ntAPPRIS ALT1 TSL 1 (best) BASIC12.73□□□□□ -0.37
NPIPA3F8WFD2 GON7-201ENST00000306954 1154 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
NPIPA3F8WFD2 CCL19-201ENST00000311925 687 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
NPIPA3F8WFD2 CMTM1-201ENST00000328020 981 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
NPIPA3F8WFD2 CMTM1-202ENST00000332695 624 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
NPIPA3F8WFD2 PKIG-201ENST00000349959 1153 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
NPIPA3F8WFD2 SPIN2B-203ENST00000374910 725 ntTSL 3 BASIC12.73□□□□□ -0.37
NPIPA3F8WFD2 CMTM1-205ENST00000379500 1064 ntAPPRIS P4 TSL 1 (best) BASIC12.73□□□□□ -0.37
NPIPA3F8WFD2 AC103592.1-201ENST00000394513 664 ntBASIC12.73□□□□□ -0.37
NPIPA3F8WFD2 RGS5-216ENST00000449680 788 ntTSL 3 BASIC12.73□□□□□ -0.37
NPIPA3F8WFD2 TIMP1-205ENST00000456754 1095 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
NPIPA3F8WFD2 SIAH2-AS1-201ENST00000461943 441 ntTSL 4 BASIC12.73□□□□□ -0.37
NPIPA3F8WFD2 AC108199.1-201ENST00000504249 508 ntTSL 3 BASIC12.73□□□□□ -0.37
NPIPA3F8WFD2 RPS23-204ENST00000507980 836 ntTSL 2 BASIC12.73□□□□□ -0.37
NPIPA3F8WFD2 AC095040.1-201ENST00000513286 675 ntBASIC12.73□□□□□ -0.37
Retrieved 100 of 98,524 protein–RNA pairs in 55 ms