Protein–RNA interactions for Protein: C9JG80

NPIPB4, Nuclear pore complex-interacting protein family member B4, humanhuman

Predictions only

Length 1,138 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB4C9JG80 VWA5B2-202ENST00000426955 4120 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
NPIPB4C9JG80 DLG1-AS1-202ENST00000430666 1694 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
NPIPB4C9JG80 IL9RP3-201ENST00000442856 1674 ntBASIC12.29□□□□□ -0.44
NPIPB4C9JG80 SUV39H2-201ENST00000313519 3087 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
NPIPB4C9JG80 GGA1-201ENST00000325180 2528 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
NPIPB4C9JG80 ARHGAP27-203ENST00000428638 4242 ntAPPRIS P2 TSL 5 BASIC12.29□□□□□ -0.44
NPIPB4C9JG80 ACER1-201ENST00000301452 1445 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
NPIPB4C9JG80 NOP9-201ENST00000267425 6033 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
NPIPB4C9JG80 DAGLB-201ENST00000297056 2897 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
NPIPB4C9JG80 EDN1-201ENST00000379375 2033 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
NPIPB4C9JG80 SERPINA4-203ENST00000557004 2012 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
NPIPB4C9JG80 NCSTN-201ENST00000294785 2936 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
NPIPB4C9JG80 AC115284.2-201ENST00000624646 2054 ntBASIC12.28□□□□□ -0.44
NPIPB4C9JG80 USH1C-201ENST00000005226 2700 ntAPPRIS P3 TSL 5 BASIC12.28□□□□□ -0.44
NPIPB4C9JG80 CSF3-201ENST00000225474 1509 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
NPIPB4C9JG80 SFXN3-202ENST00000393459 3098 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
NPIPB4C9JG80 OS9-203ENST00000389142 2457 ntTSL 5 BASIC12.28□□□□□ -0.44
NPIPB4C9JG80 RNF43-202ENST00000577625 2198 ntTSL 2 BASIC12.28□□□□□ -0.44
NPIPB4C9JG80 AC019109.1-201ENST00000401725 1874 ntBASIC12.28□□□□□ -0.44
NPIPB4C9JG80 CD34-203ENST00000367036 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
NPIPB4C9JG80 CRYBB1-201ENST00000215939 1102 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
NPIPB4C9JG80 PQBP1-201ENST00000218224 1113 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
NPIPB4C9JG80 PQBP1-202ENST00000247140 664 ntTSL 3 BASIC12.28□□□□□ -0.44
NPIPB4C9JG80 CSHL1-203ENST00000346606 659 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
NPIPB4C9JG80 PQBP1-203ENST00000376563 1056 ntAPPRIS P1 TSL 2 BASIC12.28□□□□□ -0.44
NPIPB4C9JG80 PQBP1-204ENST00000376566 760 ntTSL 3 BASIC12.28□□□□□ -0.44
NPIPB4C9JG80 AL583805.1-201ENST00000391389 531 ntBASIC12.28□□□□□ -0.44
NPIPB4C9JG80 PQBP1-205ENST00000396763 965 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
NPIPB4C9JG80 GSTK1-202ENST00000409500 888 ntTSL 2 BASIC12.28□□□□□ -0.44
NPIPB4C9JG80 LINC01118-202ENST00000409912 1023 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
NPIPB4C9JG80 AL137058.1-201ENST00000418237 673 ntTSL 5 BASIC12.28□□□□□ -0.44
NPIPB4C9JG80 AL807761.2-201ENST00000422849 729 ntBASIC12.28□□□□□ -0.44
NPIPB4C9JG80 FOXP4-AS1-203ENST00000439386 404 ntTSL 3 BASIC12.28□□□□□ -0.44
NPIPB4C9JG80 PQBP1-207ENST00000447146 1020 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
NPIPB4C9JG80 AC011247.2-201ENST00000457097 233 ntTSL 4 BASIC12.28□□□□□ -0.44
NPIPB4C9JG80 SCARNA12-201ENST00000459155 270 ntBASIC12.28□□□□□ -0.44
NPIPB4C9JG80 EFCAB10-201ENST00000460135 717 ntTSL 2 BASIC12.28□□□□□ -0.44
NPIPB4C9JG80 APOPT1-207ENST00000477116 906 ntTSL 3 BASIC12.28□□□□□ -0.44
NPIPB4C9JG80 SPATA24-205ENST00000509959 641 ntTSL 5 BASIC12.28□□□□□ -0.44
NPIPB4C9JG80 SOCS2-AS1-204ENST00000551626 618 ntTSL 4 BASIC12.28□□□□□ -0.44
NPIPB4C9JG80 ATF7-212ENST00000591397 860 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
NPIPB4C9JG80 AP001505.2-201ENST00000616815 443 ntBASIC12.28□□□□□ -0.44
NPIPB4C9JG80 TUBB3-215ENST00000625617 570 ntTSL 4 BASIC12.28□□□□□ -0.44
NPIPB4C9JG80 MTUS1-229ENST00000634613 1193 ntTSL 5 BASIC12.28□□□□□ -0.44
NPIPB4C9JG80 RECQL5-218ENST00000584999 1922 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
NPIPB4C9JG80 TNK2-202ENST00000381916 4223 ntTSL 2 BASIC12.28□□□□□ -0.44
NPIPB4C9JG80 CPT1A-202ENST00000376618 2635 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
NPIPB4C9JG80 HILPDA-201ENST00000257696 1349 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
NPIPB4C9JG80 PCBP1-AS1-214ENST00000419542 1309 ntTSL 5 BASIC12.28□□□□□ -0.44
NPIPB4C9JG80 KCNMA1-291ENST00000640834 3664 ntAPPRIS ALT2 TSL 5 BASIC12.28□□□□□ -0.44
NPIPB4C9JG80 ALG8-202ENST00000376156 1677 ntTSL 2 BASIC12.28□□□□□ -0.44
NPIPB4C9JG80 SLC39A6-202ENST00000440549 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
NPIPB4C9JG80 RMND5B-212ENST00000542098 1681 ntTSL 5 BASIC12.28□□□□□ -0.44
NPIPB4C9JG80 ASF1A-201ENST00000229595 2362 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
NPIPB4C9JG80 SDR16C5-202ENST00000396721 2399 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
NPIPB4C9JG80 SLC4A7-210ENST00000440156 4120 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
NPIPB4C9JG80 UBE2A-206ENST00000625938 1381 ntTSL 2 BASIC12.28□□□□□ -0.44
NPIPB4C9JG80 DPAGT1-217ENST00000639704 1719 ntTSL 5 BASIC12.28□□□□□ -0.44
NPIPB4C9JG80 MIOS-201ENST00000340080 3453 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
NPIPB4C9JG80 HNRNPLL-209ENST00000449105 4173 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
NPIPB4C9JG80 KDM2B-202ENST00000377071 4595 ntAPPRIS P4 TSL 1 (best) BASIC12.28□□□□□ -0.44
NPIPB4C9JG80 ZNF782-205ENST00000481138 4213 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
NPIPB4C9JG80 TRIM46-205ENST00000392451 3195 ntTSL 2 BASIC12.28□□□□□ -0.44
NPIPB4C9JG80 DYNC1I1-202ENST00000359388 2843 ntAPPRIS ALT1 TSL 1 (best) BASIC12.28□□□□□ -0.44
NPIPB4C9JG80 GFRA2-202ENST00000517328 2104 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
NPIPB4C9JG80 ZFYVE19-202ENST00000336455 1784 ntTSL 2 BASIC12.28□□□□□ -0.44
NPIPB4C9JG80 PLSCR4-204ENST00000446574 1442 ntAPPRIS P1 TSL 2 BASIC12.28□□□□□ -0.44
NPIPB4C9JG80 OSBPL3-201ENST00000313367 6760 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
NPIPB4C9JG80 ZKSCAN2-201ENST00000328086 7523 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
NPIPB4C9JG80 RTF1-201ENST00000389629 5021 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
NPIPB4C9JG80 NDRG2-251ENST00000556147 2880 ntAPPRIS P4 TSL 5 BASIC12.28□□□□□ -0.44
NPIPB4C9JG80 PTCHD3-201ENST00000438700 2529 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
NPIPB4C9JG80 TMEM254-213ENST00000613758 2154 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
NPIPB4C9JG80 DNER-201ENST00000341772 3260 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
NPIPB4C9JG80 AP5Z1-201ENST00000348624 2901 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.44
NPIPB4C9JG80 ZCCHC17-207ENST00000616859 1458 ntTSL 4 BASIC12.27□□□□□ -0.44
NPIPB4C9JG80 ZCCHC17-208ENST00000618216 1489 ntTSL 3 BASIC12.27□□□□□ -0.44
NPIPB4C9JG80 XKRX-202ENST00000468904 2249 ntTSL 2 BASIC12.27□□□□□ -0.44
NPIPB4C9JG80 SMAD2-202ENST00000356825 10445 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
NPIPB4C9JG80 ALOX15B-201ENST00000380173 2605 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
NPIPB4C9JG80 MS4A15-201ENST00000337911 1536 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
NPIPB4C9JG80 PPP1R32-201ENST00000338608 1535 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
NPIPB4C9JG80 AC006372.4-201ENST00000624122 1543 ntBASIC12.27□□□□□ -0.44
NPIPB4C9JG80 MOB3C-203ENST00000371940 5725 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
NPIPB4C9JG80 SFXN3-201ENST00000224807 3089 ntTSL 5 BASIC12.27□□□□□ -0.44
NPIPB4C9JG80 PLCB1-218ENST00000629992 3095 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
NPIPB4C9JG80 HES2-201ENST00000377834 4262 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
NPIPB4C9JG80 NFATC2-207ENST00000610033 2740 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.44
NPIPB4C9JG80 ATRN-202ENST00000446916 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.44
NPIPB4C9JG80 CCND3-215ENST00000511642 2394 ntTSL 2 BASIC12.27□□□□□ -0.44
NPIPB4C9JG80 PRAME-214ENST00000543184 2758 ntAPPRIS P2 TSL 1 (best) BASIC12.27□□□□□ -0.44
NPIPB4C9JG80 FAM219B-201ENST00000357635 3550 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
NPIPB4C9JG80 SCARA5-201ENST00000354914 4026 ntAPPRIS P1 TSL 2 BASIC12.27□□□□□ -0.44
NPIPB4C9JG80 KARS-201ENST00000302445 2005 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
NPIPB4C9JG80 ODCP-201ENST00000459650 1639 ntBASIC12.27□□□□□ -0.44
NPIPB4C9JG80 TNRC18-203ENST00000399537 10572 ntAPPRIS ALT2 TSL 5 BASIC12.27□□□□□ -0.45
NPIPB4C9JG80 TNRC18-205ENST00000430969 10562 ntAPPRIS P2 TSL 5 BASIC12.27□□□□□ -0.45
NPIPB4C9JG80 PTK7-203ENST00000345201 4071 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
NPIPB4C9JG80 IKBKE-201ENST00000578328 2493 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
NPIPB4C9JG80 PKIA-202ENST00000396418 4163 ntAPPRIS P1 TSL 2 BASIC12.27□□□□□ -0.45
Retrieved 100 of 98,524 protein–RNA pairs in 45.1 ms