Protein–RNA interactions for Protein: Q9NRG1

PRTFDC1, Phosphoribosyltransferase domain-containing protein 1, humanhuman

Predictions only

Length 225 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRTFDC1Q9NRG1 TNFRSF11A-201ENST00000269485 3591 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
PRTFDC1Q9NRG1 HELLS-202ENST00000348459 3099 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
PRTFDC1Q9NRG1 GJB4-201ENST00000339480 2840 ntAPPRIS P1 TSL 2 BASIC13.11□□□□□ -0.31
PRTFDC1Q9NRG1 KRT4-204ENST00000551956 2576 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
PRTFDC1Q9NRG1 DRD3-203ENST00000460779 1557 ntAPPRIS P3 TSL 2 BASIC13.11□□□□□ -0.31
PRTFDC1Q9NRG1 PDXDC2P-206ENST00000534700 1315 ntBASIC13.11□□□□□ -0.31
PRTFDC1Q9NRG1 SEMA3F-202ENST00000413852 3212 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
PRTFDC1Q9NRG1 RBPMS-201ENST00000287771 2974 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
PRTFDC1Q9NRG1 ANKHD1-203ENST00000360839 8221 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
PRTFDC1Q9NRG1 GNG4-202ENST00000366598 1721 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
PRTFDC1Q9NRG1 SEPT6-204ENST00000360156 2609 ntAPPRIS ALT1 TSL 1 (best) BASIC13.1□□□□□ -0.31
PRTFDC1Q9NRG1 YTHDF3-209ENST00000617200 5076 ntTSL 5 BASIC13.1□□□□□ -0.31
PRTFDC1Q9NRG1 RIC1-203ENST00000414202 6774 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
PRTFDC1Q9NRG1 RAB2A-201ENST00000262646 3848 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
PRTFDC1Q9NRG1 GRAMD4-202ENST00000406902 4484 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
PRTFDC1Q9NRG1 SMARCA4-202ENST00000413806 5512 ntTSL 5 BASIC13.1□□□□□ -0.31
PRTFDC1Q9NRG1 ISY1-RAB43-201ENST00000418265 4868 ntAPPRIS P1 TSL 2 BASIC13.1□□□□□ -0.31
PRTFDC1Q9NRG1 PPT1-203ENST00000433473 2267 ntAPPRIS ALT1 TSL 1 (best) BASIC13.1□□□□□ -0.31
PRTFDC1Q9NRG1 SERPINE3-204ENST00000524365 2293 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
PRTFDC1Q9NRG1 FMR1-215ENST00000616382 1648 ntTSL 5 BASIC13.1□□□□□ -0.31
PRTFDC1Q9NRG1 UBE2V1-224ENST00000625172 2297 ntTSL 4 BASIC13.1□□□□□ -0.31
PRTFDC1Q9NRG1 SERPINB9P1-202ENST00000545177 1375 ntTSL 3 BASIC13.1□□□□□ -0.31
PRTFDC1Q9NRG1 CORO7-222ENST00000574025 2826 ntTSL 2 BASIC13.1□□□□□ -0.31
PRTFDC1Q9NRG1 CHI3L1-201ENST00000255409 1792 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
PRTFDC1Q9NRG1 HOXB4-201ENST00000332503 3757 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
PRTFDC1Q9NRG1 CEP70-201ENST00000264982 2732 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
PRTFDC1Q9NRG1 PRKAR1A-203ENST00000392711 4327 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
PRTFDC1Q9NRG1 LIMS1-215ENST00000544547 4461 ntAPPRIS ALT1 TSL 1 (best) BASIC13.1□□□□□ -0.31
PRTFDC1Q9NRG1 GPR68-203ENST00000531499 2859 ntAPPRIS P2 TSL 1 (best) BASIC13.1□□□□□ -0.31
PRTFDC1Q9NRG1 AC005840.4-201ENST00000541242 2494 ntBASIC13.1□□□□□ -0.31
PRTFDC1Q9NRG1 PDE6G-201ENST00000331056 1029 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
PRTFDC1Q9NRG1 AC091046.1-201ENST00000331871 207 ntBASIC13.1□□□□□ -0.31
PRTFDC1Q9NRG1 TPM3-211ENST00000368531 1115 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
PRTFDC1Q9NRG1 AIF1L-205ENST00000372301 671 ntTSL 2 BASIC13.1□□□□□ -0.31
PRTFDC1Q9NRG1 AC092506.1-202ENST00000401022 528 ntBASIC13.1□□□□□ -0.31
PRTFDC1Q9NRG1 MIR1307-201ENST00000408840 149 ntBASIC13.1□□□□□ -0.31
PRTFDC1Q9NRG1 AC092573.1-201ENST00000433054 884 ntBASIC13.1□□□□□ -0.31
PRTFDC1Q9NRG1 HILPDA-202ENST00000435296 785 ntAPPRIS P1 TSL 2 BASIC13.1□□□□□ -0.31
PRTFDC1Q9NRG1 AL121845.1-201ENST00000447343 464 ntTSL 2 BASIC13.1□□□□□ -0.31
PRTFDC1Q9NRG1 NOC2LP1-201ENST00000450578 752 ntBASIC13.1□□□□□ -0.31
PRTFDC1Q9NRG1 RN7SL767P-201ENST00000493013 295 ntBASIC13.1□□□□□ -0.31
PRTFDC1Q9NRG1 AC105254.1-201ENST00000507782 621 ntTSL 4 BASIC13.1□□□□□ -0.31
PRTFDC1Q9NRG1 AC069185.1-202ENST00000533405 471 ntTSL 3 BASIC13.1□□□□□ -0.31
PRTFDC1Q9NRG1 PLEKHA8P1-203ENST00000545609 277 ntTSL 3 BASIC13.1□□□□□ -0.31
PRTFDC1Q9NRG1 ZNF286A-212ENST00000580259 527 ntTSL 4 BASIC13.1□□□□□ -0.31
PRTFDC1Q9NRG1 AC016629.1-201ENST00000596579 586 ntBASIC13.1□□□□□ -0.31
PRTFDC1Q9NRG1 AC138894.2-201ENST00000602838 371 ntBASIC13.1□□□□□ -0.31
PRTFDC1Q9NRG1 C15orf59-AS1-202ENST00000615095 1224 ntTSL 5 BASIC13.1□□□□□ -0.31
PRTFDC1Q9NRG1 AP001184.1-201ENST00000637936 376 ntBASIC13.1□□□□□ -0.31
PRTFDC1Q9NRG1 DDX54-202ENST00000314045 4380 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
PRTFDC1Q9NRG1 SLC1A7-202ENST00000371494 2637 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
PRTFDC1Q9NRG1 SIMC1-205ENST00000443967 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
PRTFDC1Q9NRG1 LIMD1-202ENST00000440097 2773 ntTSL 5 BASIC13.1□□□□□ -0.31
PRTFDC1Q9NRG1 ZSCAN2-202ENST00000327179 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC13.1□□□□□ -0.31
PRTFDC1Q9NRG1 PTPRH-202ENST00000376350 3877 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
PRTFDC1Q9NRG1 NKIRAS2-201ENST00000307641 2948 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
PRTFDC1Q9NRG1 ABCC6P1-201ENST00000546162 2943 ntTSL 2 BASIC13.1□□□□□ -0.31
PRTFDC1Q9NRG1 UBAP1-202ENST00000359544 2535 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
PRTFDC1Q9NRG1 FAM90A1-203ENST00000538603 2513 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
PRTFDC1Q9NRG1 FCRL1-207ENST00000491942 1554 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
PRTFDC1Q9NRG1 SOGA3-201ENST00000465909 3756 ntTSL 5 BASIC13.1□□□□□ -0.31
PRTFDC1Q9NRG1 TSPAN14-210ENST00000616406 2436 ntTSL 2 BASIC13.1□□□□□ -0.31
PRTFDC1Q9NRG1 RABEPK-201ENST00000259460 1313 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
PRTFDC1Q9NRG1 HIGD1A-202ENST00000418900 1322 ntAPPRIS P1 TSL 2 BASIC13.1□□□□□ -0.31
PRTFDC1Q9NRG1 LMAN2L-202ENST00000377079 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
PRTFDC1Q9NRG1 SPRY2-201ENST00000377102 2708 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
PRTFDC1Q9NRG1 ADAMTSL4-201ENST00000271643 4250 ntAPPRIS P3 TSL 5 BASIC13.1□□□□□ -0.31
PRTFDC1Q9NRG1 ZNF335-201ENST00000322927 4430 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
PRTFDC1Q9NRG1 ALDOA-204ENST00000412304 1603 ntAPPRIS P2 TSL 1 (best) BASIC13.1□□□□□ -0.31
PRTFDC1Q9NRG1 ODCP-201ENST00000459650 1639 ntBASIC13.1□□□□□ -0.31
PRTFDC1Q9NRG1 PLAT-211ENST00000524009 1613 ntTSL 2 BASIC13.1□□□□□ -0.31
PRTFDC1Q9NRG1 USP44-203ENST00000537435 2499 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
PRTFDC1Q9NRG1 STK3-218ENST00000617590 2485 ntTSL 5 BASIC13.1□□□□□ -0.31
PRTFDC1Q9NRG1 AC130686.1-201ENST00000622936 2466 ntBASIC13.1□□□□□ -0.31
PRTFDC1Q9NRG1 ZKSCAN7-201ENST00000273320 3477 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
PRTFDC1Q9NRG1 RTN4-202ENST00000337526 4790 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
PRTFDC1Q9NRG1 ARAP1-202ENST00000359373 5767 ntAPPRIS ALT2 TSL 2 BASIC13.09□□□□□ -0.31
PRTFDC1Q9NRG1 OS9-207ENST00000439210 1946 ntTSL 2 BASIC13.09□□□□□ -0.31
PRTFDC1Q9NRG1 LMBR1-201ENST00000353442 7997 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
PRTFDC1Q9NRG1 TRDMT1-203ENST00000377799 3527 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
PRTFDC1Q9NRG1 DLGAP4-202ENST00000340491 2392 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
PRTFDC1Q9NRG1 ARSE-206ENST00000545496 2506 ntTSL 2 BASIC13.09□□□□□ -0.31
PRTFDC1Q9NRG1 CRACR2A-203ENST00000440314 2697 ntAPPRIS P1 TSL 2 BASIC13.09□□□□□ -0.31
PRTFDC1Q9NRG1 FTX-216ENST00000638985 1367 ntTSL 5 BASIC13.09□□□□□ -0.31
PRTFDC1Q9NRG1 ARHGAP9-213ENST00000550288 2818 ntTSL 2 BASIC13.09□□□□□ -0.31
PRTFDC1Q9NRG1 LINC00865-202ENST00000448963 4272 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
PRTFDC1Q9NRG1 MS4A15-201ENST00000337911 1536 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
PRTFDC1Q9NRG1 DAZL-201ENST00000250863 3104 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
PRTFDC1Q9NRG1 SWAP70-201ENST00000318950 4882 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
PRTFDC1Q9NRG1 CNBP-201ENST00000422453 1664 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
PRTFDC1Q9NRG1 NYAP1-201ENST00000300179 3581 ntAPPRIS P1 TSL 2 BASIC13.09□□□□□ -0.31
PRTFDC1Q9NRG1 TBX6-202ENST00000395224 1803 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
PRTFDC1Q9NRG1 IFITM10-201ENST00000340134 3706 ntAPPRIS P1 TSL 3 BASIC13.09□□□□□ -0.31
PRTFDC1Q9NRG1 OS9-220ENST00000552285 2135 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
PRTFDC1Q9NRG1 CRCP-203ENST00000395326 3009 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
PRTFDC1Q9NRG1 KCNC2-202ENST00000350228 3344 ntAPPRIS ALT2 TSL 2 BASIC13.09□□□□□ -0.31
PRTFDC1Q9NRG1 PAK6-202ENST00000455577 4215 ntTSL 2 BASIC13.09□□□□□ -0.31
PRTFDC1Q9NRG1 TAB1-201ENST00000216160 3237 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
PRTFDC1Q9NRG1 DERL3-202ENST00000318109 860 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
PRTFDC1Q9NRG1 RBL1-201ENST00000344359 3225 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Retrieved 100 of 98,524 protein–RNA pairs in 52 ms